RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 MYBBP1AQ9BQG0 1328 aaKnown RBP6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 KDM3BQ7LBC6 1761 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 A0A0G2JLW4 131 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 PER1O15534 1290 aaPredicted RBP6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 OATP04181 439 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 SNRPA1P09661 255 aaKnown RBP6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 CYP19A1P11511 503 aaPredicted RBP6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 DPEP1P16444 411 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 PDE6BP35913 854 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 NBPF5PQ86XG9 351 aaPredicted RBP6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 C2CD5Q86YS7 1000 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 MARVELD3Q96A59 401 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 SETDB2Q96T68 719 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 FAM117AQ9C073 453 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 RNF181Q9P0P0 153 aa6.67□□□□□ -1.34
UBE2D4-211ENST00000491770 POTEB3A0JP26 581 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 FAM177BA6PVY3 158 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 HTATSF1O43719 755 aaKnown RBP6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 SERPINB2P05120 415 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 IL6STP40189 918 aaPredicted RBP6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 PSEN2P49810 448 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 C1QTNF8P60827 252 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 DDX10Q13206 875 aaKnown RBP6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 SOGA3Q5TF21 947 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 POTEBQ6S5H4 581 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 GIGYF2Q6Y7W6 1299 aaKnown RBP6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 AMIGO3Q86WK7 504 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 NGEFQ8N5V2 710 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 IL27Q8NEV9 243 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 NLRP7Q8WX94 980 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 ZNF496Q96IT1 587 aaPredicted RBP6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 KCNK17Q96T54 332 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 TSPYL4Q9UJ04 414 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 PDZRN3Q9UPQ7 1066 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 LAS1LQ9Y4W2 734 aaKnown RBP6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 COL11A2P13942 1736 aaPredicted RBP6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 KIAA1551Q9HCM1 1747 aa6.66□□□□□ -1.34
UBE2D4-211ENST00000491770 ARFGEF2Q9Y6D5 1785 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 TRIM6-TRIM34B2RNG4 842 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 MS4A1P11836 297 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 CHRNA5P30532 468 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 EMP3P54852 163 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 MDM2Q00987 491 aaPredicted RBP6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 DCTN1Q14203 1278 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 NFIXQ14938 502 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 NFE2L2Q16236 605 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 PROX2Q3B8N5 592 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 SLC4A9Q96Q91 983 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 ZBED2Q9BTP6 218 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
UBE2D4-211ENST00000491770 CEMIPQ8WUJ3 1361 aa6.65□□□□□ -1.35
UBE2D4-211ENST00000491770 NRXN2Q9P2S2 1712 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 ANKRD36CQ5JPF3 1778 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 CCDC88AQ3V6T2 1871 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 POLRMTO00411 1230 aaKnown RBP6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 MYL6BP14649 208 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 CLCN1P35523 988 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 CALD1Q05682 793 aaKnown RBP6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 DDR1Q08345 913 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 TTLL12Q14166 644 aaPredicted RBP6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 TAF7Q15545 349 aaPredicted RBP6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 C9orf131Q5VYM1 1079 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 INTS5Q6P9B9 1019 aaKnown RBP6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 TTLL6Q8N841 843 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 RPGRQ92834 1020 aaKnown RBP6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 FAM163AQ96GL9 167 aaPredicted RBP6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 NYXQ9GZU5 481 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 GPCPD1Q9NPB8 672 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 NIP7Q9Y221 180 aaKnown RBP eCLIP6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 GTF3C3Q9Y5Q9 886 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 SRCAPQ6ZRS2 3230 aa6.64□□□□□ -1.35
UBE2D4-211ENST00000491770 ARHGAP33O14559 1287 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 ADCY9O60503 1353 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 A1BGP04217 495 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 PIP4K2AP48426 406 aaPredicted RBP6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 RIPK4P57078 832 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 DMRTA1Q5VZB9 504 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 NUDT18Q6ZVK8 323 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 CCDC146Q8IYE0 955 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 ZNF687Q8N1G0 1237 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 ANKRD31Q8N7Z5 1873 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 IL17REQ8NFR9 667 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 CNKSR1Q969H4 720 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 PHACTR3Q96KR7 559 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 TAOK3Q9H2K8 898 aa6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 RRP7AQ9Y3A4 280 aaKnown RBP6.63□□□□□ -1.35
UBE2D4-211ENST00000491770 NUP98P52948 1817 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 ZC3H4Q9UPT8 1303 aaKnown RBP6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 FAM205CA6NFA0 338 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 EIF2S2P20042 333 aaKnown RBP6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 RASSF7Q02833 373 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 CCDC93Q567U6 631 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 TBC1D9BQ66K14 1250 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 TPTE2Q6XPS3 522 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 RBM46Q8TBY0 533 aaKnown RBP6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 TATDN2Q93075 761 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 SLC4A5Q9BY07 1137 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 ZBTB3Q9H5J0 574 aa6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 FAM217BQ9NTX9 383 aaPredicted RBP6.62□□□□□ -1.35
UBE2D4-211ENST00000491770 ERBB4Q15303 1308 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms