RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 G2E3Q7L622 706 aa22.41■■□□□ 1.18
SMARCD3-214ENST00000491651 FKBP5Q13451 457 aaPredicted RBP22.4■■□□□ 1.18
SMARCD3-214ENST00000491651 RBM46Q8TBY0 533 aaKnown RBP22.4■■□□□ 1.18
SMARCD3-214ENST00000491651 SPEF2Q9C093 1822 aa22.4■■□□□ 1.18
SMARCD3-214ENST00000491651 VEGFAP15692 232 aaPredicted RBP22.39■■□□□ 1.17
SMARCD3-214ENST00000491651 CDHR2Q9BYE9 1310 aa22.38■■□□□ 1.17
SMARCD3-214ENST00000491651 SP8Q8IXZ3 490 aa22.38■■□□□ 1.17
SMARCD3-214ENST00000491651 SUPT20HQ8NEM7 779 aa22.38■■□□□ 1.17
SMARCD3-214ENST00000491651 JDP2Q8WYK2 163 aa22.38■■□□□ 1.17
SMARCD3-214ENST00000491651 E9PSI1 815 aa22.37■■□□□ 1.17
SMARCD3-214ENST00000491651 PDE8AO60658 829 aa22.37■■□□□ 1.17
SMARCD3-214ENST00000491651 IGKV5-2P06315 115 aa22.37■■□□□ 1.17
SMARCD3-214ENST00000491651 DNAAF4Q8WXU2 420 aa22.37■■□□□ 1.17
SMARCD3-214ENST00000491651 LTBP1Q14766 1721 aa22.37■■□□□ 1.17
SMARCD3-214ENST00000491651 VPS33BQ9H267 617 aa22.36■■□□□ 1.17
SMARCD3-214ENST00000491651 COL4A5P29400 1685 aa22.36■■□□□ 1.17
SMARCD3-214ENST00000491651 DUOX1Q9NRD9 1551 aa22.35■■□□□ 1.17
SMARCD3-214ENST00000491651 NEURL1BA8MQ27 555 aa22.35■■□□□ 1.17
SMARCD3-214ENST00000491651 FZD9O00144 591 aa22.35■■□□□ 1.17
SMARCD3-214ENST00000491651 HSPA6P17066 643 aa22.35■■□□□ 1.17
SMARCD3-214ENST00000491651 CCDC152Q4G0S7 254 aa22.35■■□□□ 1.17
SMARCD3-214ENST00000491651 DPP8Q6V1X1 898 aaPredicted RBP22.35■■□□□ 1.17
SMARCD3-214ENST00000491651 LARGE2Q8N3Y3 721 aa22.35■■□□□ 1.17
SMARCD3-214ENST00000491651 MPNDQ8N594 471 aa22.35■■□□□ 1.17
SMARCD3-214ENST00000491651 COL4A1P02462 1669 aa22.34■■□□□ 1.17
SMARCD3-214ENST00000491651 DDNO94850 711 aaPredicted RBP22.34■■□□□ 1.17
SMARCD3-214ENST00000491651 FSTL1Q12841 308 aa22.34■■□□□ 1.17
SMARCD3-214ENST00000491651 CWF19L2Q2TBE0 894 aaKnown RBP22.34■■□□□ 1.17
SMARCD3-214ENST00000491651 SLC51AQ86UW1 340 aa22.34■■□□□ 1.17
SMARCD3-214ENST00000491651 RTFDC1Q9BY42 306 aaPredicted RBP22.34■■□□□ 1.17
SMARCD3-214ENST00000491651 ZNF541Q9H0D2 1346 aa22.33■■□□□ 1.17
SMARCD3-214ENST00000491651 IQCA1LA6NCM1 817 aa22.33■■□□□ 1.17
SMARCD3-214ENST00000491651 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
SMARCD3-214ENST00000491651 LINS1Q8NG48 757 aa22.33■■□□□ 1.17
SMARCD3-214ENST00000491651 CELF1Q92879 486 aaKnown RBP22.33■■□□□ 1.17
SMARCD3-214ENST00000491651 L3MBTL3Q96JM7 780 aaPredicted RBP22.33■■□□□ 1.17
SMARCD3-214ENST00000491651 EIF6P56537 245 aaKnown RBP22.32■■□□□ 1.16
SMARCD3-214ENST00000491651 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
SMARCD3-214ENST00000491651 NIM1KQ8IY84 436 aa22.32■■□□□ 1.16
SMARCD3-214ENST00000491651 SMC1BQ8NDV3 1235 aa22.32■■□□□ 1.16
SMARCD3-214ENST00000491651 POTECB2RU33 542 aa22.31■■□□□ 1.16
SMARCD3-214ENST00000491651 RPS8P62241 208 aaKnown RBP22.31■■□□□ 1.16
SMARCD3-214ENST00000491651 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
SMARCD3-214ENST00000491651 GCKRQ14397 625 aa22.31■■□□□ 1.16
SMARCD3-214ENST00000491651 JARID2Q92833 1246 aaPredicted RBP22.31■■□□□ 1.16
SMARCD3-214ENST00000491651 CTSWP56202 376 aa22.3■■□□□ 1.16
SMARCD3-214ENST00000491651 GPC2Q8N158 579 aa22.3■■□□□ 1.16
SMARCD3-214ENST00000491651 H7C1W4 665 aa22.29■■□□□ 1.16
SMARCD3-214ENST00000491651 AOC3Q16853 763 aa22.29■■□□□ 1.16
SMARCD3-214ENST00000491651 UBE3BQ7Z3V4 1068 aa22.29■■□□□ 1.16
SMARCD3-214ENST00000491651 RTL9Q8NET4 1388 aa22.28■■□□□ 1.16
SMARCD3-214ENST00000491651 KIAA2012Q0VF49 1180 aa22.28■■□□□ 1.16
SMARCD3-214ENST00000491651 SEC31BQ9NQW1 1179 aa22.28■■□□□ 1.16
SMARCD3-214ENST00000491651 CDC5LQ99459 802 aaKnown RBP22.27■■□□□ 1.16
SMARCD3-214ENST00000491651 ADAMTSL1Q8N6G6 1762 aa22.27■■□□□ 1.16
SMARCD3-214ENST00000491651 PSME4Q14997 1843 aa22.27■■□□□ 1.15
SMARCD3-214ENST00000491651 F6X3S4 739 aa22.26■■□□□ 1.15
SMARCD3-214ENST00000491651 APLP1P51693 650 aa22.26■■□□□ 1.15
SMARCD3-214ENST00000491651 ANKRD18AQ8IVF6 992 aa22.26■■□□□ 1.15
SMARCD3-214ENST00000491651 TTLL11Q8NHH1 800 aa22.26■■□□□ 1.15
SMARCD3-214ENST00000491651 CCDC85AQ96PX6 553 aaPredicted RBP22.26■■□□□ 1.15
SMARCD3-214ENST00000491651 PLA2G12BQ9BX93 195 aa22.26■■□□□ 1.15
SMARCD3-214ENST00000491651 NSFL1CQ9UNZ2 370 aaKnown RBP22.26■■□□□ 1.15
SMARCD3-214ENST00000491651 BEND3Q5T5X7 828 aa22.25■■□□□ 1.15
SMARCD3-214ENST00000491651 EYA3Q99504 573 aa22.25■■□□□ 1.15
SMARCD3-214ENST00000491651 HACL1Q9UJ83 578 aa22.25■■□□□ 1.15
SMARCD3-214ENST00000491651 ZNRF3Q9ULT6 936 aa22.25■■□□□ 1.15
SMARCD3-214ENST00000491651 GJA3Q9Y6H8 435 aa22.25■■□□□ 1.15
SMARCD3-214ENST00000491651 CDCA7LQ96GN5 454 aa22.24■■□□□ 1.15
SMARCD3-214ENST00000491651 TAF1DQ9H5J8 278 aaPredicted RBP22.24■■□□□ 1.15
SMARCD3-214ENST00000491651 A0A1B0GUL6 1792 aa22.24■■□□□ 1.15
SMARCD3-214ENST00000491651 C6orf229H3BNL8 230 aa22.23■■□□□ 1.15
SMARCD3-214ENST00000491651 CASP7P55210 303 aa22.23■■□□□ 1.15
SMARCD3-214ENST00000491651 GPSM2P81274 684 aa22.23■■□□□ 1.15
SMARCD3-214ENST00000491651 WASHC4Q2M389 1173 aa22.23■■□□□ 1.15
SMARCD3-214ENST00000491651 MIER1Q8N108 512 aa22.23■■□□□ 1.15
SMARCD3-214ENST00000491651 PODXL2Q9NZ53 605 aa22.23■■□□□ 1.15
SMARCD3-214ENST00000491651 PTPRCP08575 1304 aa22.23■■□□□ 1.15
SMARCD3-214ENST00000491651 ALDH1L1O75891 902 aa22.22■■□□□ 1.15
SMARCD3-214ENST00000491651 CT47B1P0C2W7 299 aaPredicted RBP22.22■■□□□ 1.15
SMARCD3-214ENST00000491651 LMOD1P29536 600 aaPredicted RBP22.22■■□□□ 1.15
SMARCD3-214ENST00000491651 TRMT2AQ8IZ69 625 aaKnown RBP22.22■■□□□ 1.15
SMARCD3-214ENST00000491651 MRPL50Q8N5N7 158 aaKnown RBP22.22■■□□□ 1.15
SMARCD3-214ENST00000491651 GREM2Q9H772 168 aa22.22■■□□□ 1.15
SMARCD3-214ENST00000491651 CEP350Q5VT06 3117 aa22.22■■□□□ 1.15
SMARCD3-214ENST00000491651 SCN9AQ15858 1988 aa22.21■■□□□ 1.15
SMARCD3-214ENST00000491651 EPHX2P34913 555 aa22.21■■□□□ 1.15
SMARCD3-214ENST00000491651 ALDH1L2Q3SY69 923 aa22.21■■□□□ 1.15
SMARCD3-214ENST00000491651 CHADLQ6NUI6 762 aa22.21■■□□□ 1.15
SMARCD3-214ENST00000491651 SLC4A10Q6U841 1118 aa22.21■■□□□ 1.15
SMARCD3-214ENST00000491651 LDHDQ86WU2 507 aa22.21■■□□□ 1.15
SMARCD3-214ENST00000491651 ANKIB1Q9P2G1 1089 aa22.21■■□□□ 1.15
SMARCD3-214ENST00000491651 POLLQ9UGP5 575 aa22.21■■□□□ 1.15
SMARCD3-214ENST00000491651 UFL1O94874 794 aa22.2■■□□□ 1.14
SMARCD3-214ENST00000491651 PNMA8AQ86V59 439 aaPredicted RBP22.2■■□□□ 1.14
SMARCD3-214ENST00000491651 TBC1D16Q8TBP0 767 aa22.2■■□□□ 1.14
SMARCD3-214ENST00000491651 SSH1Q8WYL5 1049 aa22.2■■□□□ 1.14
SMARCD3-214ENST00000491651 SRCIN1Q9C0H9 1055 aa22.2■■□□□ 1.14
SMARCD3-214ENST00000491651 GGA1Q9UJY5 639 aa22.2■■□□□ 1.14
SMARCD3-214ENST00000491651 XDHP47989 1333 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms