RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 MAP2K7O14733 419 aa12.21□□□□□ -0.46
SREBF2-208ENST00000491541 GNAI2P04899 355 aa12.21□□□□□ -0.46
SREBF2-208ENST00000491541 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.46
SREBF2-208ENST00000491541 DDX60LQ5H9U9 1706 aaKnown RBP12.21□□□□□ -0.46
SREBF2-208ENST00000491541 KMT5BQ4FZB7 885 aa12.21□□□□□ -0.46
SREBF2-208ENST00000491541 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.46
SREBF2-208ENST00000491541 ROBO2Q9HCK4 1378 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 RSRC2Q7L4I2 434 aaKnown RBP12.2□□□□□ -0.46
SREBF2-208ENST00000491541 A0A0G2JS52 829 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 NAA16Q6N069 864 aaPredicted RBP12.2□□□□□ -0.46
SREBF2-208ENST00000491541 HSD3B7Q9H2F3 369 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 V9GYY5 206 aaPredicted RBP12.2□□□□□ -0.46
SREBF2-208ENST00000491541 A0A1W2PQ27 194 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 A0A1W2PQ64 194 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 A0A1W2PQD8 194 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 ELL2O00472 640 aaPredicted RBP12.2□□□□□ -0.46
SREBF2-208ENST00000491541 TUBB4BP68371 445 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 PSME1Q06323 249 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 HMG20BQ9P0W2 317 aa12.2□□□□□ -0.46
SREBF2-208ENST00000491541 CCDC192P0DO97 292 aa12.19□□□□□ -0.46
SREBF2-208ENST00000491541 TBX2Q13207 712 aaPredicted RBP12.19□□□□□ -0.46
SREBF2-208ENST00000491541 CT47A1Q5JQC4 288 aaPredicted RBP12.19□□□□□ -0.46
SREBF2-208ENST00000491541 ZNF662Q6ZS27 426 aa12.19□□□□□ -0.46
SREBF2-208ENST00000491541 TMEM139Q8IV31 216 aa12.19□□□□□ -0.46
SREBF2-208ENST00000491541 USP44Q9H0E7 712 aa12.19□□□□□ -0.46
SREBF2-208ENST00000491541 TTC12Q9H892 705 aaPredicted RBP12.19□□□□□ -0.46
SREBF2-208ENST00000491541 ALDH1L1O75891 902 aa12.19□□□□□ -0.46
SREBF2-208ENST00000491541 SRRTQ9BXP5 876 aaKnown RBP12.19□□□□□ -0.46
SREBF2-208ENST00000491541 IQSEC3Q9UPP2 1182 aaPredicted RBP12.19□□□□□ -0.46
SREBF2-208ENST00000491541 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
SREBF2-208ENST00000491541 EMC10Q5UCC4 262 aa12.19□□□□□ -0.46
SREBF2-208ENST00000491541 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
SREBF2-208ENST00000491541 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
SREBF2-208ENST00000491541 CAPN2P17655 700 aa12.18□□□□□ -0.46
SREBF2-208ENST00000491541 KRT222Q8N1A0 295 aa12.18□□□□□ -0.46
SREBF2-208ENST00000491541 SCAND2PQ9GZW5 306 aaPredicted RBP12.18□□□□□ -0.46
SREBF2-208ENST00000491541 GGNBP2Q9H3C7 697 aa12.18□□□□□ -0.46
SREBF2-208ENST00000491541 SMARCA5O60264 1052 aaPredicted RBP12.18□□□□□ -0.46
SREBF2-208ENST00000491541 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
SREBF2-208ENST00000491541 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.18□□□□□ -0.46
SREBF2-208ENST00000491541 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
SREBF2-208ENST00000491541 RAB21Q9UL25 225 aa12.18□□□□□ -0.46
SREBF2-208ENST00000491541 AK2P54819 239 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 TMEM132EQ6IEE7 984 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 TRIM65Q6PJ69 517 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 IKBKBO14920 756 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
SREBF2-208ENST00000491541 TYRO3Q06418 890 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 TTC6Q86TZ1 520 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 CCAR2Q8N163 923 aaKnown RBP12.17□□□□□ -0.46
SREBF2-208ENST00000491541 TIGD1Q96MW7 591 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 PXDNQ92626 1479 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 SRPK2P78362 688 aaKnown RBP12.17□□□□□ -0.46
SREBF2-208ENST00000491541 CBX8Q9HC52 389 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 GDPD2Q9HCC8 539 aa12.17□□□□□ -0.46
SREBF2-208ENST00000491541 ZSCAN16Q9H4T2 348 aaPredicted RBP12.16□□□□□ -0.46
SREBF2-208ENST00000491541 GSDMDP57764 484 aa12.16□□□□□ -0.46
SREBF2-208ENST00000491541 TOB2Q14106 344 aaPredicted RBP12.16□□□□□ -0.46
SREBF2-208ENST00000491541 NT5DC1Q5TFE4 455 aa12.16□□□□□ -0.46
SREBF2-208ENST00000491541 SPC24Q8NBT2 197 aa12.16□□□□□ -0.46
SREBF2-208ENST00000491541 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
SREBF2-208ENST00000491541 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.46
SREBF2-208ENST00000491541 UNC5CLQ8IV45 518 aa12.16□□□□□ -0.46
SREBF2-208ENST00000491541 DNAJC2Q99543 621 aaKnown RBP12.16□□□□□ -0.46
SREBF2-208ENST00000491541 HIP1O00291 1037 aa12.15□□□□□ -0.46
SREBF2-208ENST00000491541 NOP2P46087 812 aaKnown RBP12.15□□□□□ -0.46
SREBF2-208ENST00000491541 ANKRD1Q15327 319 aa12.15□□□□□ -0.46
SREBF2-208ENST00000491541 DRC7Q8IY82 874 aa12.15□□□□□ -0.46
SREBF2-208ENST00000491541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.15□□□□□ -0.46
SREBF2-208ENST00000491541 CHMP4AQ9BY43 222 aa12.15□□□□□ -0.46
SREBF2-208ENST00000491541 PLA2G4AP47712 749 aa12.15□□□□□ -0.46
SREBF2-208ENST00000491541 BEND3Q5T5X7 828 aa12.15□□□□□ -0.46
SREBF2-208ENST00000491541 CNPY2Q9Y2B0 182 aa12.15□□□□□ -0.46
SREBF2-208ENST00000491541 CCDC66A2RUB6 948 aa12.15□□□□□ -0.46
SREBF2-208ENST00000491541 NEK4P51957 841 aa12.15□□□□□ -0.47
SREBF2-208ENST00000491541 RASEFQ8IZ41 740 aa12.15□□□□□ -0.47
SREBF2-208ENST00000491541 RUBCNQ92622 972 aa12.15□□□□□ -0.47
SREBF2-208ENST00000491541 CABP1Q9NZU7 370 aa12.15□□□□□ -0.47
SREBF2-208ENST00000491541 CALCOCO1Q9P1Z2 691 aa12.15□□□□□ -0.47
SREBF2-208ENST00000491541 TUBE1Q9UJT0 475 aa12.15□□□□□ -0.47
SREBF2-208ENST00000491541 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.47
SREBF2-208ENST00000491541 TUBB2AQ13885 445 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 PGBD1Q96JS3 809 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 TUBB2BQ9BVA1 445 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 PDCP20941 246 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 LRP10Q7Z4F1 713 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 CACTINQ8WUQ7 758 aaKnown RBP12.14□□□□□ -0.47
SREBF2-208ENST00000491541 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 PNMA6EA0A0J9YXQ4 647 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 ERICH4A6NGS2 130 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 FANCGO15287 622 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 NCAPHQ15003 741 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 SWT1Q5T5J6 900 aaKnown RBP12.14□□□□□ -0.47
SREBF2-208ENST00000491541 ZNF572Q7Z3I7 529 aaPredicted RBP12.14□□□□□ -0.47
SREBF2-208ENST00000491541 ZNF592Q92610 1267 aa12.14□□□□□ -0.47
SREBF2-208ENST00000491541 GEMIN8Q9NWZ8 242 aaKnown RBP12.14□□□□□ -0.47
SREBF2-208ENST00000491541 MSANTD4Q8NCY6 345 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms