RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 AFDNP55196 1824 aaKnown RBP14.75□□□□□ -0.05
SRGAP3-210ENST00000491467 ADRA2BP18089 450 aa14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 EIF2S2P20042 333 aaKnown RBP14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 EPHX2P34913 555 aa14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 FMR1Q06787 632 aaKnown RBP eCLIP14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 PNMA8AQ86V59 439 aaPredicted RBP14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 PLEKHM2Q8IWE5 1019 aa14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 DNAAF4Q8WXU2 420 aa14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 OSBPL3Q9H4L5 887 aa14.74□□□□□ -0.05
SRGAP3-210ENST00000491467 DDX58O95786 925 aaKnown RBP14.73□□□□□ -0.05
SRGAP3-210ENST00000491467 UBTFL1P0CB47 393 aaPredicted RBP14.73□□□□□ -0.05
SRGAP3-210ENST00000491467 C22orf23Q9BZE7 217 aa14.73□□□□□ -0.05
SRGAP3-210ENST00000491467 USP44Q9H0E7 712 aa14.73□□□□□ -0.05
SRGAP3-210ENST00000491467 TLL2Q9Y6L7 1015 aa14.73□□□□□ -0.05
SRGAP3-210ENST00000491467 SZT2Q5T011 3432 aa14.73□□□□□ -0.05
SRGAP3-210ENST00000491467 AK9Q5TCS8 1911 aa14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 RAB11FIP3O75154 756 aa14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 ZNF790Q6PG37 636 aa14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 NECTIN2Q92692 538 aa14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 PHAXQ9H814 394 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 CHPF2Q9P2E5 772 aa14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 HPS5Q9UPZ3 1129 aa14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 AKAP11Q9UKA4 1901 aa14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 CACNA1SQ13698 1873 aa14.72□□□□□ -0.05
SRGAP3-210ENST00000491467 PCDH11XQ9BZA7 1347 aa14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 PCDH11YQ9BZA8 1340 aa14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 KCNQ3O43525 872 aa14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 CDC45O75419 566 aa14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 RBM25P49756 843 aaKnown RBP14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 BEND3Q5T5X7 828 aa14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 TTC22Q5TAA0 569 aa14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 KSR2Q6VAB6 950 aa14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 COLQQ9Y215 455 aaPredicted RBP14.71□□□□□ -0.05
SRGAP3-210ENST00000491467 UBR2Q8IWV8 1755 aa14.7□□□□□ -0.06
SRGAP3-210ENST00000491467 HSP90AB4PQ58FF6 505 aa14.7□□□□□ -0.06
SRGAP3-210ENST00000491467 SSH3Q8TE77 659 aa14.7□□□□□ -0.06
SRGAP3-210ENST00000491467 PI4KAP2A4QPH2 592 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 ERVV-2B6SEH9 535 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 C21orf2O43822 256 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 CST9Q5W186 159 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 CASC1Q6TDU7 716 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 CTU1Q7Z7A3 348 aaKnown RBP14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 C2CD5Q86YS7 1000 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 PI4KAP1Q8N8J0 262 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 LRRCC1Q9C099 1032 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 SRP68Q9UHB9 627 aaKnown RBP14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 ASAP1Q9ULH1 1129 aa14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 MYH14Q7Z406 1995 aaKnown RBP14.69□□□□□ -0.06
SRGAP3-210ENST00000491467 AOX1Q06278 1338 aa14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 ERBB4Q15303 1308 aa14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 POLRMTO00411 1230 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 RPS6KA4O75676 772 aa14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 SNRPA1P09661 255 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 MFAP1P55081 439 aaKnown RBP14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 POLA2Q14181 598 aa14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 TTC5Q8N0Z6 440 aa14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 FMNL2Q96PY5 1086 aa14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 TAOK3Q9H2K8 898 aa14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 COL5A3P25940 1745 aaPredicted RBP14.68□□□□□ -0.06
SRGAP3-210ENST00000491467 COL6A3P12111 3177 aa14.67□□□□□ -0.06
SRGAP3-210ENST00000491467 H0YIN7 160 aa14.67□□□□□ -0.06
SRGAP3-210ENST00000491467 CYP27B1O15528 508 aa14.67□□□□□ -0.06
SRGAP3-210ENST00000491467 CABP4P57796 275 aa14.67□□□□□ -0.06
SRGAP3-210ENST00000491467 MTX1Q13505 466 aa14.67□□□□□ -0.06
SRGAP3-210ENST00000491467 MPNDQ8N594 471 aa14.67□□□□□ -0.06
SRGAP3-210ENST00000491467 NFATC2IPQ8NCF5 419 aa14.67□□□□□ -0.06
SRGAP3-210ENST00000491467 LRRFIP2Q9Y608 721 aaKnown RBP14.67□□□□□ -0.06
SRGAP3-210ENST00000491467 RC3H1Q5TC82 1133 aaKnown RBP14.66□□□□□ -0.06
SRGAP3-210ENST00000491467 LINS1Q8NG48 757 aa14.66□□□□□ -0.06
SRGAP3-210ENST00000491467 UTYO14607 1347 aa14.66□□□□□ -0.06
SRGAP3-210ENST00000491467 TRAF5O00463 557 aa14.65□□□□□ -0.06
SRGAP3-210ENST00000491467 TBC1D9Q6ZT07 1266 aa14.65□□□□□ -0.06
SRGAP3-210ENST00000491467 IL27Q8NEV9 243 aa14.65□□□□□ -0.06
SRGAP3-210ENST00000491467 SNX21Q969T3 373 aa14.65□□□□□ -0.06
SRGAP3-210ENST00000491467 TMOD3Q9NYL9 352 aa14.65□□□□□ -0.06
SRGAP3-210ENST00000491467 STAP2Q9UGK3 403 aa14.65□□□□□ -0.06
SRGAP3-210ENST00000491467 ARFGEF2Q9Y6D5 1785 aa14.65□□□□□ -0.06
SRGAP3-210ENST00000491467 TM4SF1P30408 202 aa14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 PDE1AP54750 535 aa14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 NEXNQ0ZGT2 675 aa14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 RTL5Q5HYW3 569 aaPredicted RBP14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 SAPCD2Q86UD0 394 aa14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 ZNF622Q969S3 477 aaKnown RBP eCLIP14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 MAP3K2Q9Y2U5 619 aa14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 LTBP3Q9NS15 1303 aa14.64□□□□□ -0.07
SRGAP3-210ENST00000491467 PNMA6EA0A0J9YXQ4 647 aa14.63□□□□□ -0.07
SRGAP3-210ENST00000491467 GSPT1P15170 499 aaKnown RBP14.63□□□□□ -0.07
SRGAP3-210ENST00000491467 PDIA6Q15084 440 aa14.63□□□□□ -0.07
SRGAP3-210ENST00000491467 KIF1BPQ96EK5 621 aa14.63□□□□□ -0.07
SRGAP3-210ENST00000491467 ZIC5Q96T25 663 aa14.63□□□□□ -0.07
SRGAP3-210ENST00000491467 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
SRGAP3-210ENST00000491467 C9orf78Q9NZ63 289 aaPredicted RBP14.63□□□□□ -0.07
SRGAP3-210ENST00000491467 SALL3Q9BXA9 1300 aa14.63□□□□□ -0.07
SRGAP3-210ENST00000491467 EPB41L2O43491 1005 aaKnown RBP14.62□□□□□ -0.07
SRGAP3-210ENST00000491467 PPP1R42Q7Z4L9 355 aa14.62□□□□□ -0.07
SRGAP3-210ENST00000491467 ERC1Q8IUD2 1116 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms