RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 KLRG1Q96E93 195 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 MYD88Q99836 296 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 GJA3Q9Y6H8 435 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 COL4A5P29400 1685 aa10.65□□□□□ -0.7
LSM2-213ENST00000491421 IL16Q14005 1332 aa10.64□□□□□ -0.71
LSM2-213ENST00000491421 IRS4O14654 1257 aaPredicted RBP10.64□□□□□ -0.71
LSM2-213ENST00000491421 EPHX2P34913 555 aa10.64□□□□□ -0.71
LSM2-213ENST00000491421 SF3B3Q15393 1217 aaKnown RBP10.64□□□□□ -0.71
LSM2-213ENST00000491421 TMC4Q7Z404 712 aa10.64□□□□□ -0.71
LSM2-213ENST00000491421 PNMA8AQ86V59 439 aaPredicted RBP10.64□□□□□ -0.71
LSM2-213ENST00000491421 MPNDQ8N594 471 aa10.64□□□□□ -0.71
LSM2-213ENST00000491421 ZBTB38Q8NAP3 1195 aaPredicted RBP10.64□□□□□ -0.71
LSM2-213ENST00000491421 STK31Q9BXU1 1019 aa10.64□□□□□ -0.71
LSM2-213ENST00000491421 RTFDC1Q9BY42 306 aaPredicted RBP10.64□□□□□ -0.71
LSM2-213ENST00000491421 VPS33BQ9H267 617 aa10.64□□□□□ -0.71
LSM2-213ENST00000491421 HSP90B1P14625 803 aaKnown RBP10.63□□□□□ -0.71
LSM2-213ENST00000491421 LMOD1P29536 600 aaPredicted RBP10.63□□□□□ -0.71
LSM2-213ENST00000491421 TWISTNBQ3B726 338 aaPredicted RBP10.63□□□□□ -0.71
LSM2-213ENST00000491421 CCDC191Q8NCU4 936 aa10.63□□□□□ -0.71
LSM2-213ENST00000491421 CLEC11AQ9Y240 323 aa10.63□□□□□ -0.71
LSM2-213ENST00000491421 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
LSM2-213ENST00000491421 KIAA2012Q0VF49 1180 aa10.62□□□□□ -0.71
LSM2-213ENST00000491421 CELF1Q92879 486 aaKnown RBP10.62□□□□□ -0.71
LSM2-213ENST00000491421 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
LSM2-213ENST00000491421 CWC25Q9NXE8 425 aaPredicted RBP10.62□□□□□ -0.71
LSM2-213ENST00000491421 ZNRF3Q9ULT6 936 aa10.62□□□□□ -0.71
LSM2-213ENST00000491421 MAP3K2Q9Y2U5 619 aa10.62□□□□□ -0.71
LSM2-213ENST00000491421 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
LSM2-213ENST00000491421 FANCIQ9NVI1 1328 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 PI4KAP2A4QPH2 592 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 SCNN1DP51172 638 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 KSR2Q6VAB6 950 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 WDR63Q8IWG1 891 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 PI4KAP1Q8N8J0 262 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 JMYQ8N9B5 988 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 CREBZFQ9NS37 354 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 SCN4AP35499 1836 aa10.61□□□□□ -0.71
LSM2-213ENST00000491421 PASKQ96RG2 1323 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 PDE8AO60658 829 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 SLC4A2P04920 1241 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 EPS15P42566 896 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 RPS8P62241 208 aaKnown RBP10.6□□□□□ -0.71
LSM2-213ENST00000491421 CXCL9Q07325 125 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 NEXNQ0ZGT2 675 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 CCDC152Q4G0S7 254 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 FAM9BQ8IZU0 186 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 JARID2Q92833 1246 aaPredicted RBP10.6□□□□□ -0.71
LSM2-213ENST00000491421 NSFL1CQ9UNZ2 370 aaKnown RBP10.6□□□□□ -0.71
LSM2-213ENST00000491421 LAMB2P55268 1798 aa10.6□□□□□ -0.71
LSM2-213ENST00000491421 DDX60Q8IY21 1712 aaKnown RBP10.59□□□□□ -0.71
LSM2-213ENST00000491421 C6orf229H3BNL8 230 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 RAD17O75943 681 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 ITGBL1O95965 494 aaPredicted RBP10.59□□□□□ -0.71
LSM2-213ENST00000491421 IGKV5-2P06315 115 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 GPSM2P81274 684 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 TNIP1Q15025 636 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 WASHC4Q2M389 1173 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 MAP1SQ66K74 1059 aaPredicted RBP10.59□□□□□ -0.71
LSM2-213ENST00000491421 CIAPIN1Q6FI81 312 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 G2E3Q7L622 706 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 SEC31BQ9NQW1 1179 aa10.59□□□□□ -0.71
LSM2-213ENST00000491421 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.71
LSM2-213ENST00000491421 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
LSM2-213ENST00000491421 GMPSP49915 693 aaPredicted RBP10.58□□□□□ -0.72
LSM2-213ENST00000491421 FLIIQ13045 1269 aa10.58□□□□□ -0.72
LSM2-213ENST00000491421 CWF19L2Q2TBE0 894 aaKnown RBP10.58□□□□□ -0.72
LSM2-213ENST00000491421 USP50Q70EL3 339 aaPredicted RBP10.58□□□□□ -0.72
LSM2-213ENST00000491421 CCDC85AQ96PX6 553 aaPredicted RBP10.58□□□□□ -0.72
LSM2-213ENST00000491421 EYA3Q99504 573 aa10.58□□□□□ -0.72
LSM2-213ENST00000491421 GPRC5DQ9NZD1 345 aa10.58□□□□□ -0.72
LSM2-213ENST00000491421 POLLQ9UGP5 575 aa10.58□□□□□ -0.72
LSM2-213ENST00000491421 MKRN1Q9UHC7 482 aaKnown RBP10.58□□□□□ -0.72
LSM2-213ENST00000491421 COL4A1P02462 1669 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 PCNTO95613 3336 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 YDJCA8MPS7 323 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 RIMBP2O15034 1052 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 CTSWP56202 376 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 EXOSC9Q06265 439 aaKnown RBP10.57□□□□□ -0.72
LSM2-213ENST00000491421 FKBP5Q13451 457 aaPredicted RBP10.57□□□□□ -0.72
LSM2-213ENST00000491421 ANKRD18AQ8IVF6 992 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 TBC1D16Q8TBP0 767 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 BCL2L13Q9BXK5 485 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 MYH16Q9H6N6 1097 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 ADARB2Q9NS39 739 aaKnown RBP10.57□□□□□ -0.72
LSM2-213ENST00000491421 ANKIB1Q9P2G1 1089 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 LRRC37AA6NMS7 1700 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 ADAMTSL1Q8N6G6 1762 aa10.57□□□□□ -0.72
LSM2-213ENST00000491421 LTBP1Q14766 1721 aa10.56□□□□□ -0.72
LSM2-213ENST00000491421 VAMP4O75379 141 aa10.56□□□□□ -0.72
LSM2-213ENST00000491421 UFL1O94874 794 aa10.56□□□□□ -0.72
LSM2-213ENST00000491421 UBE3BQ7Z3V4 1068 aa10.56□□□□□ -0.72
LSM2-213ENST00000491421 DNAAF4Q8WXU2 420 aa10.56□□□□□ -0.72
LSM2-213ENST00000491421 GPR101Q96P66 508 aaPredicted RBP10.56□□□□□ -0.72
LSM2-213ENST00000491421 CDC5LQ99459 802 aaKnown RBP10.56□□□□□ -0.72
LSM2-213ENST00000491421 DBNDD1Q9H9R9 158 aa10.56□□□□□ -0.72
LSM2-213ENST00000491421 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms