RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 C9orf172C9J069 976 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 UBAP1LF5GYI3 381 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 J3QW42 95 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 PCSK2P16519 638 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 CDC25BP30305 580 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 CHRNA4P43681 627 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 KCNQ4P56696 695 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 DHX32Q7L7V1 743 aaKnown RBP3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 WFDC8Q8IUA0 241 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 TNFRSF25Q93038 417 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 EFCC1Q9HA90 598 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 HCN2Q9UL51 889 aa3.4□□□□□ -1.87
SNRNP40-207ENST00000491106 DKK1O94907 266 aa3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 WEE1P30291 646 aa3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 PLAURQ03405 335 aa3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 C8orf34Q49A92 452 aa3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 COX20Q5RI15 118 aa3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 C16orf46Q6P387 395 aa3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 NSUN5Q96P11 429 aaKnown RBP3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 SMG9Q9H0W8 520 aaKnown RBP3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 BCS1LQ9Y276 419 aa3.39□□□□□ -1.87
SNRNP40-207ENST00000491106 LOC102724428A0A0B4J2F2 783 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 ADAM23O75077 832 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 PTCD1O75127 700 aaKnown RBP3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 INPP5BP32019 993 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 SIK1P57059 783 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 NRG1Q02297 640 aaPredicted RBP3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 FKBP5Q13451 457 aaPredicted RBP3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 SWI5Q1ZZU3 235 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 IER5Q5VY09 327 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 NCAPG2Q86XI2 1143 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 IL22RA1Q8N6P7 574 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 GPR152Q8TDT2 470 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 STK32AQ8WU08 396 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 TP53INP1Q96A56 240 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 ARXQ96QS3 562 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 ARID3AQ99856 593 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 QTRT2Q9H974 415 aaKnown RBP3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 STARD13Q9Y3M8 1113 aa3.38□□□□□ -1.87
SNRNP40-207ENST00000491106 A0A0A0MRY4 1105 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 OPLAHO14841 1288 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 ELNP15502 786 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 HOXB4P17483 251 aaPredicted RBP3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 ATP2B4P23634 1241 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 AFF1P51825 1210 aaKnown RBP3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 PERM1Q5SV97 790 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 CEP135Q66GS9 1140 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 MSL1Q68DK7 614 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 FAM117BQ6P1L5 589 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 SHISA2Q6UWI4 295 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 NLRP13Q86W25 1043 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 PBXIP1Q96AQ6 731 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 LACRTQ9GZZ8 138 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 SAP130Q9H0E3 1048 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 TLR7Q9NYK1 1049 aaKnown RBP3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 ZFATQ9P243 1243 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 STIM2Q9P246 746 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 LRFN2Q9ULH4 789 aa3.37□□□□□ -1.87
SNRNP40-207ENST00000491106 MMP20O60882 483 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 SMNDC1O75940 238 aaKnown RBP eCLIP3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 MAP3K6O95382 1288 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 ABL1P00519 1130 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 PROCP04070 461 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 ZAP70P43403 619 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 IREB2P48200 963 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 DNM1Q05193 864 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 HYAL2Q12891 473 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 ZMYM1Q5SVZ6 1142 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 TMEM164Q5U3C3 297 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 CAPN12Q6ZSI9 719 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 ZNF438Q7Z4V0 828 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 ABTB2Q8N961 1025 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 PLD4Q96BZ4 506 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 DMGDHQ9UI17 866 aaKnown RBP3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 MTMR7Q9Y216 660 aa3.36□□□□□ -1.87
SNRNP40-207ENST00000491106 ZBTB42B2RXF5 422 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 ATG7O95352 703 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 NID1P14543 1247 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 ELOAQ14241 798 aaKnown RBP3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 C20orf204Q6ZNR8 217 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 NBPF11Q86T75 865 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 ETFBKMTQ8IXQ9 262 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 TRPM4Q8TD43 1214 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 MYO19Q96H55 970 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 PRDM6Q9NQX0 595 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 TPSG1Q9NRR2 321 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 CXXC1Q9P0U4 656 aaPredicted RBP3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 PPME1Q9Y570 386 aa3.35□□□□□ -1.87
SNRNP40-207ENST00000491106 LINC01387J3KSC0 135 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 SART1O43290 800 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 ITGB2P05107 769 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 RPLP1P05386 114 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 GLB1P16278 677 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 CES1P23141 567 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 NRLP54845 237 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 CABP4P57796 275 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 GPLD1P80108 840 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 NOM1Q5C9Z4 860 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 TXNDC11Q6PKC3 985 aa3.34□□□□□ -1.87
SNRNP40-207ENST00000491106 POTEAQ6S8J7 498 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms