RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 BRCA1P38398 1863 aaKnown RBP19.91■□□□□ 0.78
TRA2A-208ENST00000490942 DDX46Q7L014 1031 aaKnown RBP19.91■□□□□ 0.78
TRA2A-208ENST00000490942 TMC4Q7Z404 712 aa19.91■□□□□ 0.78
TRA2A-208ENST00000490942 TTLL11Q8NHH1 800 aa19.91■□□□□ 0.78
TRA2A-208ENST00000490942 BBOX1O75936 387 aa19.9■□□□□ 0.78
TRA2A-208ENST00000490942 UBTFL1P0CB47 393 aaPredicted RBP19.9■□□□□ 0.78
TRA2A-208ENST00000490942 RLBP1P12271 317 aa19.9■□□□□ 0.78
TRA2A-208ENST00000490942 RRP1P56182 461 aaKnown RBP19.9■□□□□ 0.78
TRA2A-208ENST00000490942 RABL6Q3YEC7 729 aaPredicted RBP19.9■□□□□ 0.78
TRA2A-208ENST00000490942 ZNF622Q969S3 477 aaKnown RBP eCLIP19.9■□□□□ 0.785e-11■■■□□ 15
TRA2A-208ENST00000490942 TNNQ9UQP3 1299 aa19.9■□□□□ 0.78
TRA2A-208ENST00000490942 FOXO4P98177 505 aa19.89■□□□□ 0.77
TRA2A-208ENST00000490942 GRIPAP1Q4V328 841 aa19.89■□□□□ 0.77
TRA2A-208ENST00000490942 SOGA3Q5TF21 947 aa19.89■□□□□ 0.77
TRA2A-208ENST00000490942 CC2D2BQ6DHV5 1058 aa19.89■□□□□ 0.77
TRA2A-208ENST00000490942 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
TRA2A-208ENST00000490942 DDX19BQ9UMR2 479 aa19.89■□□□□ 0.77
TRA2A-208ENST00000490942 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
TRA2A-208ENST00000490942 GRAPQ13588 217 aa19.88■□□□□ 0.77
TRA2A-208ENST00000490942 MVPQ14764 893 aaKnown RBP19.88■□□□□ 0.77
TRA2A-208ENST00000490942 ITPRIPQ8IWB1 547 aa19.88■□□□□ 0.77
TRA2A-208ENST00000490942 GRAPLQ8TC17 118 aaPredicted RBP19.88■□□□□ 0.77
TRA2A-208ENST00000490942 KAZALD1Q96I82 304 aa19.88■□□□□ 0.77
TRA2A-208ENST00000490942 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
TRA2A-208ENST00000490942 PLIN1O60240 522 aa19.87■□□□□ 0.77
TRA2A-208ENST00000490942 GRIN3BO60391 1043 aa19.87■□□□□ 0.77
TRA2A-208ENST00000490942 PRPF40BQ6NWY9 871 aaKnown RBP19.87■□□□□ 0.77
TRA2A-208ENST00000490942 PANK1Q8TE04 598 aa19.87■□□□□ 0.77
TRA2A-208ENST00000490942 SUCLG2Q96I99 432 aa19.87■□□□□ 0.77
TRA2A-208ENST00000490942 CDC5LQ99459 802 aaKnown RBP19.87■□□□□ 0.77
TRA2A-208ENST00000490942 MEIS3Q99687 375 aa19.87■□□□□ 0.77
TRA2A-208ENST00000490942 MYH3P11055 1940 aa19.86■□□□□ 0.77
TRA2A-208ENST00000490942 C7orf43Q8WVR3 580 aa19.86■□□□□ 0.77
TRA2A-208ENST00000490942 GNAI2P04899 355 aa19.85■□□□□ 0.77
TRA2A-208ENST00000490942 EPHA10Q5JZY3 1008 aa19.85■□□□□ 0.77
TRA2A-208ENST00000490942 BCS1LQ9Y276 419 aa19.85■□□□□ 0.77
TRA2A-208ENST00000490942 ARFGEF1Q9Y6D6 1849 aa19.84■□□□□ 0.77
TRA2A-208ENST00000490942 RPS8P62241 208 aaKnown RBP19.84■□□□□ 0.77
TRA2A-208ENST00000490942 MTX1Q13505 466 aa19.84■□□□□ 0.77
TRA2A-208ENST00000490942 LMBR1LQ6UX01 489 aa19.84■□□□□ 0.77
TRA2A-208ENST00000490942 ANKRD44Q8N8A2 993 aa19.84■□□□□ 0.77
TRA2A-208ENST00000490942 BICC1Q9H694 974 aaKnown RBP19.84■□□□□ 0.77
TRA2A-208ENST00000490942 GREM2Q9H772 168 aa19.84■□□□□ 0.77
TRA2A-208ENST00000490942 ANKRD18BA2A2Z9 1011 aa19.83■□□□□ 0.77
TRA2A-208ENST00000490942 PPEF1O14829 653 aaPredicted RBP19.83■□□□□ 0.77
TRA2A-208ENST00000490942 IFIT5Q13325 482 aaKnown RBP19.83■□□□□ 0.77
TRA2A-208ENST00000490942 GPR162Q16538 588 aa19.83■□□□□ 0.77
TRA2A-208ENST00000490942 SP8Q8IXZ3 490 aa19.83■□□□□ 0.77
TRA2A-208ENST00000490942 TMX4Q9H1E5 349 aaPredicted RBP19.83■□□□□ 0.77
TRA2A-208ENST00000490942 ATP6V0A2Q9Y487 856 aa19.83■□□□□ 0.77
TRA2A-208ENST00000490942 YBX3P16989 372 aaKnown RBP eCLIP19.82■□□□□ 0.761e-9■□□□□ 9.9
TRA2A-208ENST00000490942 ITGA6P23229 1130 aa19.82■□□□□ 0.76
TRA2A-208ENST00000490942 CCDC57Q2TAC2 916 aa19.82■□□□□ 0.76
TRA2A-208ENST00000490942 FAM161AQ3B820 660 aa19.82■□□□□ 0.76
TRA2A-208ENST00000490942 ANKRD18AQ8IVF6 992 aa19.82■□□□□ 0.76
TRA2A-208ENST00000490942 CELF1Q92879 486 aaKnown RBP19.82■□□□□ 0.76
TRA2A-208ENST00000490942 COG6Q9Y2V7 657 aa19.82■□□□□ 0.76
TRA2A-208ENST00000490942 LRRFIP2Q9Y608 721 aaKnown RBP19.82■□□□□ 0.76
TRA2A-208ENST00000490942 CCDC93Q567U6 631 aa19.81■□□□□ 0.76
TRA2A-208ENST00000490942 RTKN2Q8IZC4 609 aa19.81■□□□□ 0.76
TRA2A-208ENST00000490942 SEC31BQ9NQW1 1179 aa19.81■□□□□ 0.76
TRA2A-208ENST00000490942 BSDC1Q9NW68 430 aaPredicted RBP19.81■□□□□ 0.76
TRA2A-208ENST00000490942 SLX4Q8IY92 1834 aa19.81■□□□□ 0.76
TRA2A-208ENST00000490942 IGHMBP2P38935 993 aaKnown RBP19.8■□□□□ 0.76
TRA2A-208ENST00000490942 AAMPQ13685 434 aa19.8■□□□□ 0.76
TRA2A-208ENST00000490942 C20orf194Q5TEA3 1177 aa19.8■□□□□ 0.76
TRA2A-208ENST00000490942 ZBTB40Q9NUA8 1239 aa19.8■□□□□ 0.76
TRA2A-208ENST00000490942 LTBP3Q9NS15 1303 aa19.79■□□□□ 0.76
TRA2A-208ENST00000490942 SNED1Q8TER0 1413 aa19.79■□□□□ 0.76
TRA2A-208ENST00000490942 CCDC85AQ96PX6 553 aaPredicted RBP19.79■□□□□ 0.76
TRA2A-208ENST00000490942 FBXO3Q9UK99 471 aa19.79■□□□□ 0.76
TRA2A-208ENST00000490942 C21orf2O43822 256 aa19.78■□□□□ 0.76
TRA2A-208ENST00000490942 PELP1Q8IZL8 1130 aaKnown RBP19.78■□□□□ 0.76
TRA2A-208ENST00000490942 CHMP3Q9Y3E7 222 aa19.78■□□□□ 0.76
TRA2A-208ENST00000490942 LRRC37AA6NMS7 1700 aa19.77■□□□□ 0.76
TRA2A-208ENST00000490942 CENPBP07199 599 aaPredicted RBP19.77■□□□□ 0.76
TRA2A-208ENST00000490942 PSMD1Q99460 953 aa19.77■□□□□ 0.76
TRA2A-208ENST00000490942 MPHOSPH8Q99549 860 aa19.77■□□□□ 0.76
TRA2A-208ENST00000490942 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
TRA2A-208ENST00000490942 VPS33BQ9H267 617 aa19.76■□□□□ 0.75
TRA2A-208ENST00000490942 PODXL2Q9NZ53 605 aa19.76■□□□□ 0.75
TRA2A-208ENST00000490942 RFX5P48382 616 aaPredicted RBP19.75■□□□□ 0.75
TRA2A-208ENST00000490942 TAF7LQ5H9L4 462 aa19.75■□□□□ 0.75
TRA2A-208ENST00000490942 RPAP2Q8IXW5 612 aaPredicted RBP19.75■□□□□ 0.75
TRA2A-208ENST00000490942 RTFDC1Q9BY42 306 aaPredicted RBP19.75■□□□□ 0.75
TRA2A-208ENST00000490942 TAOK3Q9H2K8 898 aa19.75■□□□□ 0.75
TRA2A-208ENST00000490942 COPRSQ9NQ92 184 aa19.75■□□□□ 0.75
TRA2A-208ENST00000490942 WWC3Q9ULE0 1092 aa19.75■□□□□ 0.75
TRA2A-208ENST00000490942 SRGAP3O43295 1099 aa19.74■□□□□ 0.75
TRA2A-208ENST00000490942 ATP8B2P98198 1209 aa19.74■□□□□ 0.75
TRA2A-208ENST00000490942 FKBP4Q02790 459 aaKnown RBP eCLIP19.74■□□□□ 0.75
TRA2A-208ENST00000490942 SUPT20HQ8NEM7 779 aa19.74■□□□□ 0.75
TRA2A-208ENST00000490942 ANKRD2Q9GZV1 360 aa19.74■□□□□ 0.75
TRA2A-208ENST00000490942 COL4A1P02462 1669 aa19.73■□□□□ 0.75
TRA2A-208ENST00000490942 CIAO1O76071 339 aa19.73■□□□□ 0.75
TRA2A-208ENST00000490942 LDHAL6AQ6ZMR3 332 aa19.73■□□□□ 0.75
TRA2A-208ENST00000490942 ARHGAP27Q6ZUM4 889 aa19.73■□□□□ 0.75
TRA2A-208ENST00000490942 MPNDQ8N594 471 aa19.73■□□□□ 0.75
TRA2A-208ENST00000490942 SSH3Q8TE77 659 aa19.73■□□□□ 0.75
TRA2A-208ENST00000490942 MINPP1Q9UNW1 487 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms