RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
HDAC9-225ENST00000490851 PCCAP05165 728 aaPredicted RBP12.28□□□□□ -0.44
HDAC9-225ENST00000490851 HSP90AB3PQ58FF7 597 aa12.28□□□□□ -0.44
HDAC9-225ENST00000490851 ZBTB38Q8NAP3 1195 aaPredicted RBP12.28□□□□□ -0.44
HDAC9-225ENST00000490851 GPATCH3Q96I76 525 aa12.28□□□□□ -0.44
HDAC9-225ENST00000490851 COL15A1P39059 1388 aa12.28□□□□□ -0.44
HDAC9-225ENST00000490851 AOX1Q06278 1338 aa12.28□□□□□ -0.44
HDAC9-225ENST00000490851 UBN2Q6ZU65 1347 aa12.28□□□□□ -0.44
HDAC9-225ENST00000490851 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
HDAC9-225ENST00000490851 ECHDC1Q9NTX5 307 aa12.28□□□□□ -0.44
HDAC9-225ENST00000490851 KCNG1Q9UIX4 513 aa12.28□□□□□ -0.44
HDAC9-225ENST00000490851 ATRNO75882 1429 aa12.27□□□□□ -0.44
HDAC9-225ENST00000490851 NUP98P52948 1817 aa12.27□□□□□ -0.44
HDAC9-225ENST00000490851 LRRC24Q50LG9 513 aa12.27□□□□□ -0.44
HDAC9-225ENST00000490851 TUBGCP6Q96RT7 1819 aa12.27□□□□□ -0.45
HDAC9-225ENST00000490851 ERC2O15083 957 aa12.27□□□□□ -0.45
HDAC9-225ENST00000490851 BECN1Q14457 450 aa12.27□□□□□ -0.45
HDAC9-225ENST00000490851 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
HDAC9-225ENST00000490851 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
HDAC9-225ENST00000490851 PLCD4Q9BRC7 762 aa12.27□□□□□ -0.45
HDAC9-225ENST00000490851 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.45
HDAC9-225ENST00000490851 BTAF1O14981 1849 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 ERVV-1B6SEH8 477 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 IRS4O14654 1257 aaPredicted RBP12.26□□□□□ -0.45
HDAC9-225ENST00000490851 GLRX3O76003 335 aaKnown RBP12.26□□□□□ -0.45
HDAC9-225ENST00000490851 CHMLP26374 656 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
HDAC9-225ENST00000490851 TTC41PQ6P2S7 1318 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 CAMTA2O94983 1202 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 TNNI3KQ59H18 835 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 CNTROBQ8N137 903 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 BOLA2Q9H3K6 86 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 CCNL1Q9UK58 526 aaPredicted RBP12.26□□□□□ -0.45
HDAC9-225ENST00000490851 FPGT-TNNI3KV9GXZ4 949 aa12.26□□□□□ -0.45
HDAC9-225ENST00000490851 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
HDAC9-225ENST00000490851 MCCP23508 829 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 NEUROD6Q96NK8 337 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 ESYT1Q9BSJ8 1104 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 TBC1D2Q9BYX2 928 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 NIP7Q9Y221 180 aaKnown RBP eCLIP12.25□□□□□ -0.45
HDAC9-225ENST00000490851 USP42Q9H9J4 1324 aaKnown RBP12.25□□□□□ -0.45
HDAC9-225ENST00000490851 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 AK9Q5TCS8 1911 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 HCLS1P14317 486 aaPredicted RBP12.25□□□□□ -0.45
HDAC9-225ENST00000490851 SUSD4Q5VX71 490 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 ZNF34Q8IZ26 560 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 DBNDD2Q9BQY9 259 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 USP26Q9BXU7 913 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 ANO2Q9NQ90 1003 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 DBNLQ9UJU6 430 aaKnown RBP12.25□□□□□ -0.45
HDAC9-225ENST00000490851 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
HDAC9-225ENST00000490851 GNPATO15228 680 aa12.24□□□□□ -0.45
HDAC9-225ENST00000490851 REC8O95072 547 aa12.24□□□□□ -0.45
HDAC9-225ENST00000490851 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
HDAC9-225ENST00000490851 IL25Q9H293 177 aa12.24□□□□□ -0.45
HDAC9-225ENST00000490851 GREM2Q9H772 168 aa12.24□□□□□ -0.45
HDAC9-225ENST00000490851 EYA2O00167 538 aa12.23□□□□□ -0.45
HDAC9-225ENST00000490851 CTSWP56202 376 aa12.23□□□□□ -0.45
HDAC9-225ENST00000490851 IFIT5Q13325 482 aaKnown RBP12.23□□□□□ -0.45
HDAC9-225ENST00000490851 PSMD1Q99460 953 aa12.23□□□□□ -0.45
HDAC9-225ENST00000490851 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
HDAC9-225ENST00000490851 COL5A3P25940 1745 aaPredicted RBP12.23□□□□□ -0.45
HDAC9-225ENST00000490851 ITGA6P23229 1130 aa12.23□□□□□ -0.45
HDAC9-225ENST00000490851 TIMM10P62072 90 aa12.23□□□□□ -0.45
HDAC9-225ENST00000490851 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
HDAC9-225ENST00000490851 CWC27Q6UX04 472 aaKnown RBP12.23□□□□□ -0.45
HDAC9-225ENST00000490851 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
HDAC9-225ENST00000490851 EDC3Q96F86 508 aaKnown RBP12.23□□□□□ -0.45
HDAC9-225ENST00000490851 KIF2CQ99661 725 aa12.23□□□□□ -0.45
HDAC9-225ENST00000490851 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
HDAC9-225ENST00000490851 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
HDAC9-225ENST00000490851 PHF14O94880 888 aa12.22□□□□□ -0.45
HDAC9-225ENST00000490851 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
HDAC9-225ENST00000490851 NBR1Q14596 966 aa12.22□□□□□ -0.45
HDAC9-225ENST00000490851 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
HDAC9-225ENST00000490851 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
HDAC9-225ENST00000490851 DNAJC2Q99543 621 aaKnown RBP12.22□□□□□ -0.45
HDAC9-225ENST00000490851 UTP14AQ9BVJ6 771 aaKnown RBP12.22□□□□□ -0.45
HDAC9-225ENST00000490851 PLA2G12BQ9BX93 195 aa12.22□□□□□ -0.45
HDAC9-225ENST00000490851 DIAPH3Q9NSV4 1193 aa12.22□□□□□ -0.45
HDAC9-225ENST00000490851 SRP68Q9UHB9 627 aaKnown RBP12.22□□□□□ -0.45
HDAC9-225ENST00000490851 RREB1Q92766 1687 aa12.22□□□□□ -0.45
HDAC9-225ENST00000490851 CSF1RP07333 972 aa12.21□□□□□ -0.45
HDAC9-225ENST00000490851 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
HDAC9-225ENST00000490851 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
HDAC9-225ENST00000490851 PDE8AO60658 829 aa12.21□□□□□ -0.46
HDAC9-225ENST00000490851 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.46
HDAC9-225ENST00000490851 FSD1Q9BTV5 496 aa12.21□□□□□ -0.46
HDAC9-225ENST00000490851 ZNF652Q9Y2D9 606 aa12.21□□□□□ -0.46
HDAC9-225ENST00000490851 ANKRD18BA2A2Z9 1011 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 TRIM37O94972 964 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 USPL1Q5W0Q7 1092 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 CNNM1Q9NRU3 951 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 CEP126Q9P2H0 1117 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 CNTNAP4Q9C0A0 1308 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 CICQ96RK0 1608 aaPredicted RBP12.2□□□□□ -0.46
HDAC9-225ENST00000490851 SBF2Q86WG5 1849 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 A0A1B0GUL7 405 aa12.2□□□□□ -0.46
HDAC9-225ENST00000490851 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms