RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RBM46Q8TBY0 533 aaKnown RBP19.47■□□□□ 0.71
COL27A1-206ENST00000490831 RTFDC1Q9BY42 306 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-206ENST00000490831 VPS33BQ9H267 617 aa19.47■□□□□ 0.71
COL27A1-206ENST00000490831 LRRC37AA6NMS7 1700 aa19.46■□□□□ 0.71
COL27A1-206ENST00000490831 NEURL1BA8MQ27 555 aa19.46■□□□□ 0.71
COL27A1-206ENST00000490831 POTECB2RU33 542 aa19.46■□□□□ 0.71
COL27A1-206ENST00000490831 FZD9O00144 591 aa19.46■□□□□ 0.71
COL27A1-206ENST00000490831 VEGFAP15692 232 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-206ENST00000490831 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-206ENST00000490831 TAF1P21675 1872 aa19.45■□□□□ 0.7
COL27A1-206ENST00000490831 PDE8AO60658 829 aa19.45■□□□□ 0.7
COL27A1-206ENST00000490831 SLFN5Q08AF3 891 aa19.45■□□□□ 0.7
COL27A1-206ENST00000490831 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-206ENST00000490831 DNAAF4Q8WXU2 420 aa19.45■□□□□ 0.7
COL27A1-206ENST00000490831 COL4A5P29400 1685 aa19.45■□□□□ 0.7
COL27A1-206ENST00000490831 CWF19L2Q2TBE0 894 aaKnown RBP19.44■□□□□ 0.7
COL27A1-206ENST00000490831 CELF1Q92879 486 aaKnown RBP19.44■□□□□ 0.7
COL27A1-206ENST00000490831 L3MBTL3Q96JM7 780 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-206ENST00000490831 COL4A1P02462 1669 aa19.43■□□□□ 0.7
COL27A1-206ENST00000490831 H7C1W4 665 aa19.43■□□□□ 0.7
COL27A1-206ENST00000490831 DDNO94850 711 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-206ENST00000490831 C16orf71Q8IYS4 520 aaPredicted RBP19.43■□□□□ 0.7
COL27A1-206ENST00000490831 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
COL27A1-206ENST00000490831 LINS1Q8NG48 757 aa19.43■□□□□ 0.7
COL27A1-206ENST00000490831 ZNF541Q9H0D2 1346 aa19.43■□□□□ 0.7
COL27A1-206ENST00000490831 HSPA6P17066 643 aa19.42■□□□□ 0.7
COL27A1-206ENST00000490831 FSTL1Q12841 308 aa19.42■□□□□ 0.7
COL27A1-206ENST00000490831 GCKRQ14397 625 aa19.42■□□□□ 0.7
COL27A1-206ENST00000490831 CCDC152Q4G0S7 254 aa19.42■□□□□ 0.7
COL27A1-206ENST00000490831 DIEXFQ68CQ4 756 aaKnown RBP19.42■□□□□ 0.7
COL27A1-206ENST00000490831 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
COL27A1-206ENST00000490831 MPNDQ8N594 471 aa19.42■□□□□ 0.7
COL27A1-206ENST00000490831 JDP2Q8WYK2 163 aa19.42■□□□□ 0.7
COL27A1-206ENST00000490831 JARID2Q92833 1246 aaPredicted RBP19.42■□□□□ 0.7
COL27A1-206ENST00000490831 DUOX1Q9NRD9 1551 aa19.41■□□□□ 0.7
COL27A1-206ENST00000490831 RPS8P62241 208 aaKnown RBP19.41■□□□□ 0.7
COL27A1-206ENST00000490831 DPP8Q6V1X1 898 aaPredicted RBP19.41■□□□□ 0.7
COL27A1-206ENST00000490831 CASP7P55210 303 aa19.4■□□□□ 0.7
COL27A1-206ENST00000490831 CTSWP56202 376 aa19.4■□□□□ 0.7
COL27A1-206ENST00000490831 LARGE2Q8N3Y3 721 aa19.4■□□□□ 0.7
COL27A1-206ENST00000490831 PLA2G12BQ9BX93 195 aa19.4■□□□□ 0.7
COL27A1-206ENST00000490831 SEC31BQ9NQW1 1179 aa19.4■□□□□ 0.7
COL27A1-206ENST00000490831 RTL9Q8NET4 1388 aa19.4■□□□□ 0.7
COL27A1-206ENST00000490831 PPIP5K2O43314 1243 aa19.39■□□□□ 0.69
COL27A1-206ENST00000490831 KIAA2012Q0VF49 1180 aa19.39■□□□□ 0.69
COL27A1-206ENST00000490831 BEND3Q5T5X7 828 aa19.39■□□□□ 0.69
COL27A1-206ENST00000490831 GPC2Q8N158 579 aa19.39■□□□□ 0.69
COL27A1-206ENST00000490831 CDCA7LQ96GN5 454 aa19.39■□□□□ 0.69
COL27A1-206ENST00000490831 LTBP1Q14766 1721 aa19.39■□□□□ 0.69
COL27A1-206ENST00000490831 SCN4AP35499 1836 aa19.39■□□□□ 0.69
COL27A1-206ENST00000490831 F6X3S4 739 aa19.38■□□□□ 0.69
COL27A1-206ENST00000490831 MYH3P11055 1940 aa19.38■□□□□ 0.69
COL27A1-206ENST00000490831 AOC3Q16853 763 aa19.38■□□□□ 0.69
COL27A1-206ENST00000490831 CEP350Q5VT06 3117 aa19.38■□□□□ 0.69
COL27A1-206ENST00000490831 UBE3BQ7Z3V4 1068 aa19.38■□□□□ 0.69
COL27A1-206ENST00000490831 MIER1Q8N108 512 aa19.38■□□□□ 0.69
COL27A1-206ENST00000490831 SMC1BQ8NDV3 1235 aa19.38■□□□□ 0.69
COL27A1-206ENST00000490831 TTLL11Q8NHH1 800 aa19.38■□□□□ 0.69
COL27A1-206ENST00000490831 IQCA1LA6NCM1 817 aa19.37■□□□□ 0.69
COL27A1-206ENST00000490831 EIF6P56537 245 aaKnown RBP19.37■□□□□ 0.69
COL27A1-206ENST00000490831 NIM1KQ8IY84 436 aa19.37■□□□□ 0.69
COL27A1-206ENST00000490831 PODXL2Q9NZ53 605 aa19.37■□□□□ 0.69
COL27A1-206ENST00000490831 MRPL50Q8N5N7 158 aaKnown RBP19.36■□□□□ 0.69
COL27A1-206ENST00000490831 CT47B1P0C2W7 299 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-206ENST00000490831 GPSM2P81274 684 aa19.35■□□□□ 0.69
COL27A1-206ENST00000490831 TAF1DQ9H5J8 278 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-206ENST00000490831 ZNRF3Q9ULT6 936 aa19.35■□□□□ 0.69
COL27A1-206ENST00000490831 NSFL1CQ9UNZ2 370 aaKnown RBP19.35■□□□□ 0.69
COL27A1-206ENST00000490831 CSF1RP07333 972 aa19.34■□□□□ 0.69
COL27A1-206ENST00000490831 ALDH1L2Q3SY69 923 aa19.34■□□□□ 0.69
COL27A1-206ENST00000490831 ANKRD18AQ8IVF6 992 aa19.34■□□□□ 0.69
COL27A1-206ENST00000490831 SSH1Q8WYL5 1049 aa19.34■□□□□ 0.69
COL27A1-206ENST00000490831 CCDC85AQ96PX6 553 aaPredicted RBP19.34■□□□□ 0.69
COL27A1-206ENST00000490831 CDC5LQ99459 802 aaKnown RBP19.34■□□□□ 0.69
COL27A1-206ENST00000490831 GREM2Q9H772 168 aa19.34■□□□□ 0.69
COL27A1-206ENST00000490831 POLLQ9UGP5 575 aa19.34■□□□□ 0.69
COL27A1-206ENST00000490831 PTPRCP08575 1304 aa19.33■□□□□ 0.69
COL27A1-206ENST00000490831 ALDH1L1O75891 902 aa19.33■□□□□ 0.68
COL27A1-206ENST00000490831 APLP1P51693 650 aa19.33■□□□□ 0.68
COL27A1-206ENST00000490831 HACL1Q9UJ83 578 aa19.33■□□□□ 0.68
COL27A1-206ENST00000490831 WASHC4Q2M389 1173 aa19.32■□□□□ 0.68
COL27A1-206ENST00000490831 TBC1D16Q8TBP0 767 aa19.32■□□□□ 0.68
COL27A1-206ENST00000490831 BSDC1Q9NW68 430 aaPredicted RBP19.32■□□□□ 0.68
COL27A1-206ENST00000490831 CXCL9Q07325 125 aa19.31■□□□□ 0.68
COL27A1-206ENST00000490831 EYA3Q99504 573 aa19.31■□□□□ 0.68
COL27A1-206ENST00000490831 ADAMTSL1Q8N6G6 1762 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 C6orf229H3BNL8 230 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 GRM8O00222 908 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 POTEIP0CG38 1075 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 POTEJP0CG39 1038 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 EPHX2P34913 555 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 SCNN1DP51172 638 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 FOXO4P98177 505 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 CHADLQ6NUI6 762 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 LDHDQ86WU2 507 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 SRCIN1Q9C0H9 1055 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 GJA3Q9Y6H8 435 aa19.3■□□□□ 0.68
COL27A1-206ENST00000490831 XDHP47989 1333 aa19.29■□□□□ 0.68
COL27A1-206ENST00000490831 YDJCA8MPS7 323 aa19.29■□□□□ 0.68
COL27A1-206ENST00000490831 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms