RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 TTLL11Q8NHH1 800 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 PCNTO95613 3336 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 ALDH1B1P30837 517 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
SUPT20H-220ENST00000490716 CWF19L2Q2TBE0 894 aaKnown RBP11.82□□□□□ -0.52
SUPT20H-220ENST00000490716 LMNB1P20700 586 aa11.82□□□□□ -0.52
SUPT20H-220ENST00000490716 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
SUPT20H-220ENST00000490716 MYD88Q99836 296 aa11.82□□□□□ -0.52
SUPT20H-220ENST00000490716 C21orf2O43822 256 aa11.82□□□□□ -0.52
SUPT20H-220ENST00000490716 ARHGAP45Q92619 1136 aa11.82□□□□□ -0.52
SUPT20H-220ENST00000490716 SOGA3Q5TF21 947 aa11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 EPHA10Q5JZY3 1008 aa11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 CELF1Q92879 486 aaKnown RBP11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 DOCK2Q92608 1830 aa11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 AKAP11Q9UKA4 1901 aa11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 FOCADQ5VW36 1801 aa11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
SUPT20H-220ENST00000490716 PDE8AO60658 829 aa11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 BBOX1O75936 387 aa11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 CC2D2BQ6DHV5 1058 aa11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 ALDH1L1O75891 902 aa11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 CTSWP56202 376 aa11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 TMC4Q7Z404 712 aa11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 RBM17Q96I25 401 aaKnown RBP11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 PPEF1O14829 653 aaPredicted RBP11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
SUPT20H-220ENST00000490716 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
SUPT20H-220ENST00000490716 TRMT112Q9UI30 125 aaKnown RBP11.79□□□□□ -0.52
SUPT20H-220ENST00000490716 RFX5P48382 616 aaPredicted RBP11.79□□□□□ -0.52
SUPT20H-220ENST00000490716 CCDC93Q567U6 631 aa11.79□□□□□ -0.52
SUPT20H-220ENST00000490716 C15orf52Q6ZUT6 534 aaKnown RBP11.79□□□□□ -0.52
SUPT20H-220ENST00000490716 USP44Q9H0E7 712 aa11.79□□□□□ -0.52
SUPT20H-220ENST00000490716 INTS3Q68E01 1043 aaKnown RBP11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 ZNF541Q9H0D2 1346 aa11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 GLTPD2A6NH11 291 aa11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 F6X3S4 739 aa11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 RIC3Q7Z5B4 369 aa11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 POLLQ9UGP5 575 aa11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 VGLL2Q8N8G2 317 aa11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
SUPT20H-220ENST00000490716 YDJCA8MPS7 323 aa11.77□□□□□ -0.52
SUPT20H-220ENST00000490716 POLR2AP24928 1970 aaKnown RBP11.77□□□□□ -0.52
SUPT20H-220ENST00000490716 ARHGAP27Q6ZUM4 889 aa11.77□□□□□ -0.53
SUPT20H-220ENST00000490716 MAST2Q6P0Q8 1798 aa11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 KLHL34Q8N239 644 aa11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 TAOK3Q9H2K8 898 aa11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 GREM2Q9H772 168 aa11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 WTIPA6NIX2 430 aaPredicted RBP11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 KIAA2012Q0VF49 1180 aa11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 STK31Q9BXU1 1019 aa11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 GPSM2P81274 684 aa11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 SALL2Q9Y467 1007 aaPredicted RBP11.76□□□□□ -0.53
SUPT20H-220ENST00000490716 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
SUPT20H-220ENST00000490716 IARSP41252 1262 aaKnown RBP11.75□□□□□ -0.53
SUPT20H-220ENST00000490716 ZNF622Q969S3 477 aaKnown RBP eCLIP11.75□□□□□ -0.53
SUPT20H-220ENST00000490716 PGAP2Q9UHJ9 254 aa11.75□□□□□ -0.53
SUPT20H-220ENST00000490716 MED23Q9ULK4 1368 aa11.75□□□□□ -0.53
SUPT20H-220ENST00000490716 GRM8O00222 908 aa11.75□□□□□ -0.53
SUPT20H-220ENST00000490716 MTX1Q13505 466 aa11.74□□□□□ -0.53
SUPT20H-220ENST00000490716 WWC3Q9ULE0 1092 aa11.74□□□□□ -0.53
SUPT20H-220ENST00000490716 OTOFQ9HC10 1997 aa11.74□□□□□ -0.53
SUPT20H-220ENST00000490716 SUCLG2Q96I99 432 aa11.74□□□□□ -0.53
SUPT20H-220ENST00000490716 PASKQ96RG2 1323 aa11.74□□□□□ -0.53
SUPT20H-220ENST00000490716 SCNN1DP51172 638 aa11.74□□□□□ -0.53
SUPT20H-220ENST00000490716 GMLQ99445 158 aa11.74□□□□□ -0.53
SUPT20H-220ENST00000490716 DDX60LQ5H9U9 1706 aaKnown RBP11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 TBC1D16Q8TBP0 767 aa11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 RNF181Q9P0P0 153 aa11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 MINPP1Q9UNW1 487 aa11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 TNNQ9UQP3 1299 aa11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 NOB1Q9ULX3 412 aaKnown RBP11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 FKBP5Q13451 457 aaPredicted RBP11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 RPGRQ92834 1020 aaKnown RBP11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 ZNF277Q9NRM2 450 aaPredicted RBP11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 RIPOR2Q9Y4F9 1068 aa11.73□□□□□ -0.53
SUPT20H-220ENST00000490716 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
SUPT20H-220ENST00000490716 TRIM27P14373 513 aa11.72□□□□□ -0.53
SUPT20H-220ENST00000490716 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
SUPT20H-220ENST00000490716 COL1A1P02452 1464 aaPredicted RBP11.72□□□□□ -0.53
SUPT20H-220ENST00000490716 NMRK2Q9NPI5 230 aa11.72□□□□□ -0.53
SUPT20H-220ENST00000490716 BCAR3O75815 825 aa11.71□□□□□ -0.53
SUPT20H-220ENST00000490716 CCDC152Q4G0S7 254 aa11.71□□□□□ -0.53
SUPT20H-220ENST00000490716 KIF16BQ96L93 1317 aa11.71□□□□□ -0.53
SUPT20H-220ENST00000490716 GPC2Q8N158 579 aa11.71□□□□□ -0.53
SUPT20H-220ENST00000490716 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms