RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
RIPPLY3-203ENST00000490393 LSG1Q9H089 658 aaKnown RBP16.49■□□□□ 0.23
RIPPLY3-203ENST00000490393 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
RIPPLY3-203ENST00000490393 IRS4O14654 1257 aaPredicted RBP16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 ST18O60284 1047 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 NBR1Q14596 966 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 NFKBIBQ15653 356 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 CWC27Q6UX04 472 aaKnown RBP16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 CLEC4GQ6UXB4 293 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 ZNF594Q96JF6 807 aaPredicted RBP16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 HAUS7Q99871 368 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 DBNDD2Q9BQY9 259 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 CEP126Q9P2H0 1117 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 CTSWP56202 376 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 KIAA1211Q6ZU35 1233 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 AKAP2Q9Y2D5 859 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 RAD50Q92878 1312 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 RFX7Q2KHR2 1363 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 ATRNO75882 1429 aa16.48■□□□□ 0.23
RIPPLY3-203ENST00000490393 MYH3P11055 1940 aa16.47■□□□□ 0.23
RIPPLY3-203ENST00000490393 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
RIPPLY3-203ENST00000490393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
RIPPLY3-203ENST00000490393 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
RIPPLY3-203ENST00000490393 TRPC5Q9UL62 973 aaPredicted RBP16.47■□□□□ 0.23
RIPPLY3-203ENST00000490393 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
RIPPLY3-203ENST00000490393 AFF2P51816 1311 aa16.46■□□□□ 0.23
RIPPLY3-203ENST00000490393 MCM2P49736 904 aa16.46■□□□□ 0.23
RIPPLY3-203ENST00000490393 HSP90B1P14625 803 aaKnown RBP16.46■□□□□ 0.22
RIPPLY3-203ENST00000490393 TIMM10P62072 90 aa16.46■□□□□ 0.22
RIPPLY3-203ENST00000490393 SUSD4Q5VX71 490 aa16.46■□□□□ 0.22
RIPPLY3-203ENST00000490393 LINC00116Q8NCU8 138 aa16.46■□□□□ 0.22
RIPPLY3-203ENST00000490393 KCNB2Q92953 911 aa16.46■□□□□ 0.22
RIPPLY3-203ENST00000490393 UTP14AQ9BVJ6 771 aaKnown RBP16.46■□□□□ 0.22
RIPPLY3-203ENST00000490393 RIPOR2Q9Y4F9 1068 aa16.46■□□□□ 0.22
RIPPLY3-203ENST00000490393 NHSQ6T4R5 1651 aa16.45■□□□□ 0.22
RIPPLY3-203ENST00000490393 ZNF609O15014 1411 aa16.45■□□□□ 0.22
RIPPLY3-203ENST00000490393 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
RIPPLY3-203ENST00000490393 ITGA6P23229 1130 aa16.45■□□□□ 0.22
RIPPLY3-203ENST00000490393 PALD1Q9ULE6 856 aa16.45■□□□□ 0.22
RIPPLY3-203ENST00000490393 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
RIPPLY3-203ENST00000490393 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
RIPPLY3-203ENST00000490393 MYT1Q01538 1121 aa16.44■□□□□ 0.22
RIPPLY3-203ENST00000490393 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
RIPPLY3-203ENST00000490393 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
RIPPLY3-203ENST00000490393 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
RIPPLY3-203ENST00000490393 GREM2Q9H772 168 aa16.44■□□□□ 0.22
RIPPLY3-203ENST00000490393 A0A1B0GUL7 405 aa16.44■□□□□ 0.22
RIPPLY3-203ENST00000490393 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
RIPPLY3-203ENST00000490393 BTAF1O14981 1849 aa16.43■□□□□ 0.22
RIPPLY3-203ENST00000490393 NMIQ13287 307 aaPredicted RBP16.43■□□□□ 0.22
RIPPLY3-203ENST00000490393 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 NEK4P51957 841 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 PTF1AQ7RTS3 328 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 MAP4K1Q92918 833 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 BCORQ6W2J9 1755 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 NTSR2O95665 410 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 KBTBD3Q8NAB2 608 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 FAM227BQ96M60 508 aa16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
RIPPLY3-203ENST00000490393 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
RIPPLY3-203ENST00000490393 PTH1RQ03431 593 aa16.41■□□□□ 0.22
RIPPLY3-203ENST00000490393 NECTIN1Q15223 517 aa16.41■□□□□ 0.22
RIPPLY3-203ENST00000490393 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
RIPPLY3-203ENST00000490393 SNX14Q9Y5W7 946 aa16.41■□□□□ 0.22
RIPPLY3-203ENST00000490393 MED23Q9ULK4 1368 aa16.41■□□□□ 0.22
RIPPLY3-203ENST00000490393 CCDC171Q6TFL3 1326 aa16.4■□□□□ 0.22
RIPPLY3-203ENST00000490393 SBF2Q86WG5 1849 aa16.4■□□□□ 0.22
RIPPLY3-203ENST00000490393 SPEF2Q9C093 1822 aa16.4■□□□□ 0.22
RIPPLY3-203ENST00000490393 CCDC158Q5M9N0 1113 aa16.4■□□□□ 0.22
RIPPLY3-203ENST00000490393 XAGE2Q96GT9 111 aa16.4■□□□□ 0.22
RIPPLY3-203ENST00000490393 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
RIPPLY3-203ENST00000490393 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
RIPPLY3-203ENST00000490393 FRAT2O75474 233 aaPredicted RBP16.39■□□□□ 0.22
RIPPLY3-203ENST00000490393 HSP90AA1P07900 732 aaKnown RBP16.39■□□□□ 0.22
RIPPLY3-203ENST00000490393 VGLL2Q8N8G2 317 aa16.39■□□□□ 0.22
RIPPLY3-203ENST00000490393 EDC3Q96F86 508 aaKnown RBP16.39■□□□□ 0.22
RIPPLY3-203ENST00000490393 ZNF512BQ96KM6 892 aaPredicted RBP16.39■□□□□ 0.22
RIPPLY3-203ENST00000490393 TM6SF1Q9BZW5 370 aa16.39■□□□□ 0.22
RIPPLY3-203ENST00000490393 ABCC12Q96J65 1359 aa16.39■□□□□ 0.21
RIPPLY3-203ENST00000490393 A0A0D9SFI3 127 aa16.39■□□□□ 0.21
RIPPLY3-203ENST00000490393 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
RIPPLY3-203ENST00000490393 QTRT2Q9H974 415 aaKnown RBP16.39■□□□□ 0.21
RIPPLY3-203ENST00000490393 PAG1Q9NWQ8 432 aa16.39■□□□□ 0.21
RIPPLY3-203ENST00000490393 NARFQ9UHQ1 456 aa16.39■□□□□ 0.21
RIPPLY3-203ENST00000490393 LY75O60449 1722 aa16.39■□□□□ 0.21
RIPPLY3-203ENST00000490393 RIC1Q4ADV7 1423 aa16.38■□□□□ 0.21
RIPPLY3-203ENST00000490393 PDE8BO95263 885 aa16.38■□□□□ 0.21
RIPPLY3-203ENST00000490393 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
RIPPLY3-203ENST00000490393 RASEFQ8IZ41 740 aa16.38■□□□□ 0.21
RIPPLY3-203ENST00000490393 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
RIPPLY3-203ENST00000490393 CNNM1Q9NRU3 951 aa16.38■□□□□ 0.21
RIPPLY3-203ENST00000490393 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
RIPPLY3-203ENST00000490393 MROH5Q6ZUA9 1318 aa16.38■□□□□ 0.21
RIPPLY3-203ENST00000490393 HCLS1P14317 486 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms