RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
HLA-DOA-205ENST00000490305 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
HLA-DOA-205ENST00000490305 ANKRD18BA2A2Z9 1011 aa16.34■□□□□ 0.21
HLA-DOA-205ENST00000490305 CIAO1O76071 339 aa16.34■□□□□ 0.21
HLA-DOA-205ENST00000490305 CCDC152Q4G0S7 254 aa16.34■□□□□ 0.21
HLA-DOA-205ENST00000490305 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
HLA-DOA-205ENST00000490305 CLASRPQ8N2M8 674 aaKnown RBP16.34■□□□□ 0.21
HLA-DOA-205ENST00000490305 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 IL15P40933 162 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 NFIXQ14938 502 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 SLC15A2Q16348 729 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 FAM161AQ3B820 660 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 NUTM1Q86Y26 1132 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 PLEKHM2Q8IWE5 1019 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 NLGN1Q8N2Q7 840 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 SIL1Q9H173 461 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 RTL9Q8NET4 1388 aa16.33■□□□□ 0.2
HLA-DOA-205ENST00000490305 EYA2O00167 538 aa16.32■□□□□ 0.2
HLA-DOA-205ENST00000490305 NPHP1O15259 732 aa16.32■□□□□ 0.2
HLA-DOA-205ENST00000490305 MSH5O43196 834 aa16.32■□□□□ 0.2
HLA-DOA-205ENST00000490305 ITGA6P23229 1130 aa16.32■□□□□ 0.2
HLA-DOA-205ENST00000490305 KLHDC4Q8TBB5 520 aa16.32■□□□□ 0.2
HLA-DOA-205ENST00000490305 IL1RAPL2Q9NP60 686 aa16.32■□□□□ 0.2
HLA-DOA-205ENST00000490305 AOX1Q06278 1338 aa16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 SASH1O94885 1247 aa16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 TM4SF1P30408 202 aa16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 SF3B3Q15393 1217 aaKnown RBP16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 NLRP3Q96P20 1036 aa16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 OSBPL3Q9H4L5 887 aa16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 GREM2Q9H772 168 aa16.31■□□□□ 0.2
HLA-DOA-205ENST00000490305 RIC1Q4ADV7 1423 aa16.3■□□□□ 0.2
HLA-DOA-205ENST00000490305 DEFB132Q7Z7B7 95 aa16.3■□□□□ 0.2
HLA-DOA-205ENST00000490305 CNBD1Q8NA66 436 aa16.3■□□□□ 0.2
HLA-DOA-205ENST00000490305 CCDC85AQ96PX6 553 aaPredicted RBP16.3■□□□□ 0.2
HLA-DOA-205ENST00000490305 CASZ1Q86V15 1759 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 SALL3Q9BXA9 1300 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 SERPINB2P05120 415 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 IFIT2P09913 472 aaKnown RBP16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 MX1P20591 662 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 BMP2KLQ5H9B9 411 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
HLA-DOA-205ENST00000490305 ABCC12Q96J65 1359 aa16.28■□□□□ 0.2
HLA-DOA-205ENST00000490305 PDE1AP54750 535 aa16.28■□□□□ 0.2
HLA-DOA-205ENST00000490305 ST5P78524 1137 aa16.28■□□□□ 0.2
HLA-DOA-205ENST00000490305 ATG9AQ7Z3C6 839 aa16.28■□□□□ 0.2
HLA-DOA-205ENST00000490305 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
HLA-DOA-205ENST00000490305 CDC5LQ99459 802 aaKnown RBP16.28■□□□□ 0.2
HLA-DOA-205ENST00000490305 ANO8Q9HCE9 1232 aaPredicted RBP16.28■□□□□ 0.2
HLA-DOA-205ENST00000490305 TTC41PQ6P2S7 1318 aa16.27■□□□□ 0.2
HLA-DOA-205ENST00000490305 IGHMBP2P38935 993 aaKnown RBP16.27■□□□□ 0.2
HLA-DOA-205ENST00000490305 TFCP2Q12800 502 aa16.27■□□□□ 0.2
HLA-DOA-205ENST00000490305 TTC22Q5TAA0 569 aa16.27■□□□□ 0.2
HLA-DOA-205ENST00000490305 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
HLA-DOA-205ENST00000490305 AACSQ86V21 672 aa16.27■□□□□ 0.2
HLA-DOA-205ENST00000490305 OTUD7AQ8TE49 926 aaPredicted RBP16.27■□□□□ 0.2
HLA-DOA-205ENST00000490305 CEP126Q9P2H0 1117 aa16.27■□□□□ 0.2
HLA-DOA-205ENST00000490305 LRP5O75197 1615 aa16.27■□□□□ 0.19
HLA-DOA-205ENST00000490305 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
HLA-DOA-205ENST00000490305 LRRC24Q50LG9 513 aa16.26■□□□□ 0.19
HLA-DOA-205ENST00000490305 TNNI3KQ59H18 835 aa16.26■□□□□ 0.19
HLA-DOA-205ENST00000490305 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
HLA-DOA-205ENST00000490305 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
HLA-DOA-205ENST00000490305 AKAP2Q9Y2D5 859 aa16.26■□□□□ 0.19
HLA-DOA-205ENST00000490305 FPGT-TNNI3KV9GXZ4 949 aa16.26■□□□□ 0.19
HLA-DOA-205ENST00000490305 ERC2O15083 957 aa16.25■□□□□ 0.19
HLA-DOA-205ENST00000490305 DDR1Q08345 913 aa16.25■□□□□ 0.19
HLA-DOA-205ENST00000490305 EAF2Q96CJ1 260 aaPredicted RBP16.25■□□□□ 0.19
HLA-DOA-205ENST00000490305 MPHOSPH8Q99549 860 aa16.25■□□□□ 0.19
HLA-DOA-205ENST00000490305 PUS3Q9BZE2 481 aaKnown RBP16.25■□□□□ 0.19
HLA-DOA-205ENST00000490305 RIPOR2Q9Y4F9 1068 aa16.25■□□□□ 0.19
HLA-DOA-205ENST00000490305 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
HLA-DOA-205ENST00000490305 MROH5Q6ZUA9 1318 aa16.24■□□□□ 0.19
HLA-DOA-205ENST00000490305 METTL24Q5JXM2 366 aa16.24■□□□□ 0.19
HLA-DOA-205ENST00000490305 ANKRD18AQ8IVF6 992 aa16.24■□□□□ 0.19
HLA-DOA-205ENST00000490305 BACH2Q9BYV9 841 aa16.24■□□□□ 0.19
HLA-DOA-205ENST00000490305 ECHDC1Q9NTX5 307 aa16.24■□□□□ 0.19
HLA-DOA-205ENST00000490305 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
HLA-DOA-205ENST00000490305 GLRX3O76003 335 aaKnown RBP16.23■□□□□ 0.19
HLA-DOA-205ENST00000490305 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
HLA-DOA-205ENST00000490305 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
HLA-DOA-205ENST00000490305 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
HLA-DOA-205ENST00000490305 SEC31BQ9NQW1 1179 aa16.23■□□□□ 0.19
HLA-DOA-205ENST00000490305 SPEF2Q9C093 1822 aa16.23■□□□□ 0.19
HLA-DOA-205ENST00000490305 TNRC6CQ9HCJ0 1690 aaKnown RBP16.22■□□□□ 0.19
HLA-DOA-205ENST00000490305 EIF5BO60841 1220 aaKnown RBP16.22■□□□□ 0.19
HLA-DOA-205ENST00000490305 GSPT1P15170 499 aaKnown RBP16.22■□□□□ 0.19
HLA-DOA-205ENST00000490305 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
HLA-DOA-205ENST00000490305 CCDC8Q9H0W5 538 aaPredicted RBP16.22■□□□□ 0.19
HLA-DOA-205ENST00000490305 ZNF609O15014 1411 aa16.21■□□□□ 0.19
HLA-DOA-205ENST00000490305 MMP10P09238 476 aa16.21■□□□□ 0.19
HLA-DOA-205ENST00000490305 PI4K2BQ8TCG2 481 aa16.21■□□□□ 0.19
HLA-DOA-205ENST00000490305 BSDC1Q9NW68 430 aaPredicted RBP16.21■□□□□ 0.19
HLA-DOA-205ENST00000490305 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms