RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 XAGE3Q8WTP9 111 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 ZC3H15Q8WU90 426 aaKnown RBP15.36■□□□□ 0.05
FDPS-215ENST00000490140 CAPNS2Q96L46 248 aa15.36■□□□□ 0.05
FDPS-215ENST00000490140 CA12O43570 354 aa15.35■□□□□ 0.05
FDPS-215ENST00000490140 HSP90B1P14625 803 aaKnown RBP15.35■□□□□ 0.05
FDPS-215ENST00000490140 PROSER3Q2NL68 480 aa15.35■□□□□ 0.05
FDPS-215ENST00000490140 TLL2Q9Y6L7 1015 aa15.35■□□□□ 0.05
FDPS-215ENST00000490140 MYBBP1AQ9BQG0 1328 aaKnown RBP15.35■□□□□ 0.05
FDPS-215ENST00000490140 HSPA8P11142 646 aaKnown RBP15.34■□□□□ 0.05
FDPS-215ENST00000490140 HCLS1P14317 486 aaPredicted RBP15.34■□□□□ 0.05
FDPS-215ENST00000490140 GMPSP49915 693 aaPredicted RBP15.34■□□□□ 0.05
FDPS-215ENST00000490140 CXCL9Q07325 125 aa15.34■□□□□ 0.05
FDPS-215ENST00000490140 HDGFL1Q5TGJ6 251 aa15.34■□□□□ 0.05
FDPS-215ENST00000490140 HHIPL1Q96JK4 782 aa15.34■□□□□ 0.05
FDPS-215ENST00000490140 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
FDPS-215ENST00000490140 LRRC37AA6NMS7 1700 aa15.34■□□□□ 0.05
FDPS-215ENST00000490140 H7C1D1 291 aa15.33■□□□□ 0.04
FDPS-215ENST00000490140 ANXA1P04083 346 aa15.33■□□□□ 0.04
FDPS-215ENST00000490140 MAP2K2P36507 400 aa15.33■□□□□ 0.04
FDPS-215ENST00000490140 GRM1Q13255 1194 aa15.33■□□□□ 0.04
FDPS-215ENST00000490140 PLBD2Q8NHP8 589 aa15.33■□□□□ 0.04
FDPS-215ENST00000490140 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
FDPS-215ENST00000490140 DBF4Q9UBU7 674 aaPredicted RBP15.33■□□□□ 0.04
FDPS-215ENST00000490140 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
FDPS-215ENST00000490140 CHL1O00533 1208 aa15.32■□□□□ 0.04
FDPS-215ENST00000490140 CELF2O95319 508 aaKnown RBP15.32■□□□□ 0.04
FDPS-215ENST00000490140 RUNDC1Q96C34 613 aa15.32■□□□□ 0.04
FDPS-215ENST00000490140 CHMP4AQ9BY43 222 aa15.32■□□□□ 0.04
FDPS-215ENST00000490140 HYPKQ9NX55 129 aa15.32■□□□□ 0.04
FDPS-215ENST00000490140 TRAF5O00463 557 aa15.31■□□□□ 0.04
FDPS-215ENST00000490140 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
FDPS-215ENST00000490140 CYP4F22Q6NT55 531 aa15.31■□□□□ 0.04
FDPS-215ENST00000490140 CDC37L1Q7L3B6 337 aa15.31■□□□□ 0.04
FDPS-215ENST00000490140 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
FDPS-215ENST00000490140 EYA3Q99504 573 aa15.31■□□□□ 0.04
FDPS-215ENST00000490140 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
FDPS-215ENST00000490140 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
FDPS-215ENST00000490140 RAD17O75943 681 aa15.3■□□□□ 0.04
FDPS-215ENST00000490140 RPS12P25398 132 aaKnown RBP15.3■□□□□ 0.04
FDPS-215ENST00000490140 CALD1Q05682 793 aaKnown RBP15.3■□□□□ 0.04
FDPS-215ENST00000490140 WASHC4Q2M389 1173 aa15.3■□□□□ 0.04
FDPS-215ENST00000490140 CST9Q5W186 159 aa15.3■□□□□ 0.04
FDPS-215ENST00000490140 ANKRD13DQ6ZTN6 518 aa15.3■□□□□ 0.04
FDPS-215ENST00000490140 PGAP2Q9UHJ9 254 aa15.3■□□□□ 0.04
FDPS-215ENST00000490140 DPF2Q92785 391 aa15.29■□□□□ 0.04
FDPS-215ENST00000490140 ABHD8Q96I13 439 aa15.29■□□□□ 0.04
FDPS-215ENST00000490140 CNOT7Q9UIV1 285 aaKnown RBP15.29■□□□□ 0.04
FDPS-215ENST00000490140 DUOX1Q9NRD9 1551 aa15.28■□□□□ 0.04
FDPS-215ENST00000490140 BRPF1P55201 1214 aaPredicted RBP15.28■□□□□ 0.04
FDPS-215ENST00000490140 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
FDPS-215ENST00000490140 NOGQ13253 232 aa15.28■□□□□ 0.04
FDPS-215ENST00000490140 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
FDPS-215ENST00000490140 SLC51AQ86UW1 340 aa15.28■□□□□ 0.04
FDPS-215ENST00000490140 MICALL2Q8IY33 904 aa15.28■□□□□ 0.04
FDPS-215ENST00000490140 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
FDPS-215ENST00000490140 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
FDPS-215ENST00000490140 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
FDPS-215ENST00000490140 ZNF408Q9H9D4 720 aa15.28■□□□□ 0.04
FDPS-215ENST00000490140 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
FDPS-215ENST00000490140 C6orf229H3BNL8 230 aa15.27■□□□□ 0.04
FDPS-215ENST00000490140 ISCA1Q9BUE6 129 aa15.27■□□□□ 0.04
FDPS-215ENST00000490140 G3V3G9 751 aa15.26■□□□□ 0.03
FDPS-215ENST00000490140 FMR1Q06787 632 aaKnown RBP eCLIP15.26■□□□□ 0.039e-6■□□□□ 9.4
FDPS-215ENST00000490140 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
FDPS-215ENST00000490140 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
FDPS-215ENST00000490140 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
FDPS-215ENST00000490140 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
FDPS-215ENST00000490140 KRT24Q2M2I5 525 aa15.25■□□□□ 0.03
FDPS-215ENST00000490140 DUSP27Q5VZP5 1158 aa15.25■□□□□ 0.03
FDPS-215ENST00000490140 RIC3Q7Z5B4 369 aa15.25■□□□□ 0.03
FDPS-215ENST00000490140 TRPM4Q8TD43 1214 aa15.25■□□□□ 0.03
FDPS-215ENST00000490140 DCPSQ96C86 337 aaKnown RBP15.25■□□□□ 0.03
FDPS-215ENST00000490140 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
FDPS-215ENST00000490140 YDJCA8MPS7 323 aa15.24■□□□□ 0.03
FDPS-215ENST00000490140 ATP5J2-PTCD1G3V325 749 aa15.24■□□□□ 0.03
FDPS-215ENST00000490140 PSMD14O00487 310 aa15.24■□□□□ 0.03
FDPS-215ENST00000490140 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
FDPS-215ENST00000490140 HUNKP57058 714 aa15.24■□□□□ 0.03
FDPS-215ENST00000490140 RPS8P62241 208 aaKnown RBP15.24■□□□□ 0.03
FDPS-215ENST00000490140 KRT26Q7Z3Y9 468 aa15.24■□□□□ 0.03
FDPS-215ENST00000490140 CELF1Q92879 486 aaKnown RBP15.24■□□□□ 0.03
FDPS-215ENST00000490140 ZC3H12CQ9C0D7 883 aaKnown RBP15.24■□□□□ 0.03
FDPS-215ENST00000490140 DBNDD1Q9H9R9 158 aa15.24■□□□□ 0.03
FDPS-215ENST00000490140 TAF1P21675 1872 aa15.24■□□□□ 0.03
FDPS-215ENST00000490140 ECE2O60344 883 aa15.23■□□□□ 0.03
FDPS-215ENST00000490140 AOC2O75106 756 aa15.23■□□□□ 0.03
FDPS-215ENST00000490140 GNAI1P63096 354 aa15.23■□□□□ 0.03
FDPS-215ENST00000490140 CCDC152Q4G0S7 254 aa15.23■□□□□ 0.03
FDPS-215ENST00000490140 C2orf69Q8N8R5 385 aa15.23■□□□□ 0.03
FDPS-215ENST00000490140 ZBTB38Q8NAP3 1195 aaPredicted RBP15.23■□□□□ 0.03
FDPS-215ENST00000490140 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
FDPS-215ENST00000490140 ANKIB1Q9P2G1 1089 aa15.23■□□□□ 0.03
FDPS-215ENST00000490140 HIRAP54198 1017 aaPredicted RBP15.22■□□□□ 0.03
FDPS-215ENST00000490140 DDX10Q13206 875 aaKnown RBP15.22■□□□□ 0.03
FDPS-215ENST00000490140 SULF1Q8IWU6 871 aa15.22■□□□□ 0.03
FDPS-215ENST00000490140 MBIPQ9NS73 344 aa15.22■□□□□ 0.03
FDPS-215ENST00000490140 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
FDPS-215ENST00000490140 ZNF609O15014 1411 aa15.21■□□□□ 0.03
FDPS-215ENST00000490140 RIMBP2O15034 1052 aa15.21■□□□□ 0.03
FDPS-215ENST00000490140 GPSM2P81274 684 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms