RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 JARID2Q92833 1246 aaPredicted RBP21.99■■□□□ 1.11
ERCC3-207ENST00000490062 GRIN3BO60391 1043 aa21.98■■□□□ 1.11
ERCC3-207ENST00000490062 FOXO4P98177 505 aa21.98■■□□□ 1.11
ERCC3-207ENST00000490062 PDE3AQ14432 1141 aa21.98■■□□□ 1.11
ERCC3-207ENST00000490062 RABL6Q3YEC7 729 aaPredicted RBP21.98■■□□□ 1.11
ERCC3-207ENST00000490062 PRPF40BQ6NWY9 871 aaKnown RBP21.98■■□□□ 1.11
ERCC3-207ENST00000490062 TMEM57Q8N5G2 664 aa21.98■■□□□ 1.11
ERCC3-207ENST00000490062 KAZALD1Q96I82 304 aa21.98■■□□□ 1.11
ERCC3-207ENST00000490062 HDAC5Q9UQL6 1122 aa21.98■■□□□ 1.11
ERCC3-207ENST00000490062 BBOX1O75936 387 aa21.97■■□□□ 1.11
ERCC3-207ENST00000490062 RLBP1P12271 317 aa21.97■■□□□ 1.11
ERCC3-207ENST00000490062 GRAPQ13588 217 aa21.97■■□□□ 1.11
ERCC3-207ENST00000490062 DDX46Q7L014 1031 aaKnown RBP21.97■■□□□ 1.11
ERCC3-207ENST00000490062 TMC4Q7Z404 712 aa21.97■■□□□ 1.11
ERCC3-207ENST00000490062 FTSJ3Q8IY81 847 aaKnown RBP21.97■■□□□ 1.11
ERCC3-207ENST00000490062 GRAPLQ8TC17 118 aaPredicted RBP21.97■■□□□ 1.11
ERCC3-207ENST00000490062 CLUAP1Q96AJ1 413 aa21.97■■□□□ 1.11
ERCC3-207ENST00000490062 BCS1LQ9Y276 419 aa21.97■■□□□ 1.11
ERCC3-207ENST00000490062 SOGA3Q5TF21 947 aa21.96■■□□□ 1.11
ERCC3-207ENST00000490062 SUCLG2Q96I99 432 aa21.96■■□□□ 1.11
ERCC3-207ENST00000490062 SNED1Q8TER0 1413 aa21.96■■□□□ 1.11
ERCC3-207ENST00000490062 GNAI3P08754 354 aa21.95■■□□□ 1.1
ERCC3-207ENST00000490062 GPR162Q16538 588 aa21.95■■□□□ 1.1
ERCC3-207ENST00000490062 CC2D2BQ6DHV5 1058 aa21.95■■□□□ 1.1
ERCC3-207ENST00000490062 DCAF8L1A6NGE4 600 aa21.94■■□□□ 1.1
ERCC3-207ENST00000490062 GRIPAP1Q4V328 841 aa21.94■■□□□ 1.1
ERCC3-207ENST00000490062 EPHA10Q5JZY3 1008 aa21.94■■□□□ 1.1
ERCC3-207ENST00000490062 LRRC37AA6NMS7 1700 aa21.94■■□□□ 1.1
ERCC3-207ENST00000490062 CACNA1SQ13698 1873 aa21.94■■□□□ 1.1
ERCC3-207ENST00000490062 UBTFL1P0CB47 393 aaPredicted RBP21.93■■□□□ 1.1
ERCC3-207ENST00000490062 MEIS3Q99687 375 aa21.93■■□□□ 1.1
ERCC3-207ENST00000490062 GREM2Q9H772 168 aa21.93■■□□□ 1.1
ERCC3-207ENST00000490062 GOLGB1Q14789 3259 aaKnown RBP21.93■■□□□ 1.1
ERCC3-207ENST00000490062 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
ERCC3-207ENST00000490062 ANKRD44Q8N8A2 993 aa21.92■■□□□ 1.1
ERCC3-207ENST00000490062 ATP6V0A2Q9Y487 856 aa21.92■■□□□ 1.1
ERCC3-207ENST00000490062 COL4A1P02462 1669 aa21.91■■□□□ 1.1
ERCC3-207ENST00000490062 LTBP3Q9NS15 1303 aa21.91■■□□□ 1.1
ERCC3-207ENST00000490062 PPEF1O14829 653 aaPredicted RBP21.91■■□□□ 1.1
ERCC3-207ENST00000490062 ZBTB7BO15156 539 aaPredicted RBP21.91■■□□□ 1.1
ERCC3-207ENST00000490062 PLIN1O60240 522 aa21.91■■□□□ 1.1
ERCC3-207ENST00000490062 RRP1P56182 461 aaKnown RBP21.91■■□□□ 1.1
ERCC3-207ENST00000490062 RPS8P62241 208 aaKnown RBP21.91■■□□□ 1.1
ERCC3-207ENST00000490062 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
ERCC3-207ENST00000490062 SP8Q8IXZ3 490 aa21.91■■□□□ 1.1
ERCC3-207ENST00000490062 PANK1Q8TE04 598 aa21.91■■□□□ 1.1
ERCC3-207ENST00000490062 CELF1Q92879 486 aaKnown RBP21.91■■□□□ 1.1
ERCC3-207ENST00000490062 CDC5LQ99459 802 aaKnown RBP21.91■■□□□ 1.1
ERCC3-207ENST00000490062 BICC1Q9H694 974 aaKnown RBP21.91■■□□□ 1.1
ERCC3-207ENST00000490062 SEC31BQ9NQW1 1179 aa21.91■■□□□ 1.1
ERCC3-207ENST00000490062 TAF1P21675 1872 aa21.91■■□□□ 1.1
ERCC3-207ENST00000490062 MVPQ14764 893 aaKnown RBP21.9■■□□□ 1.1
ERCC3-207ENST00000490062 FAM161AQ3B820 660 aa21.9■■□□□ 1.1
ERCC3-207ENST00000490062 C21orf2O43822 256 aa21.89■■□□□ 1.09
ERCC3-207ENST00000490062 ITGA6P23229 1130 aa21.89■■□□□ 1.09
ERCC3-207ENST00000490062 MTX1Q13505 466 aa21.89■■□□□ 1.09
ERCC3-207ENST00000490062 CCDC93Q567U6 631 aa21.89■■□□□ 1.09
ERCC3-207ENST00000490062 ITPRIPQ8IWB1 547 aa21.89■■□□□ 1.09
ERCC3-207ENST00000490062 WWC3Q9ULE0 1092 aa21.89■■□□□ 1.09
ERCC3-207ENST00000490062 ANKRD18AQ8IVF6 992 aa21.88■■□□□ 1.09
ERCC3-207ENST00000490062 RTKN2Q8IZC4 609 aa21.88■■□□□ 1.09
ERCC3-207ENST00000490062 PELP1Q8IZL8 1130 aaKnown RBP21.88■■□□□ 1.09
ERCC3-207ENST00000490062 BSDC1Q9NW68 430 aaPredicted RBP21.88■■□□□ 1.09
ERCC3-207ENST00000490062 DDX19BQ9UMR2 479 aa21.88■■□□□ 1.09
ERCC3-207ENST00000490062 ANKRD18BA2A2Z9 1011 aa21.87■■□□□ 1.09
ERCC3-207ENST00000490062 IFIT5Q13325 482 aaKnown RBP21.87■■□□□ 1.09
ERCC3-207ENST00000490062 CHMP4BQ9H444 224 aaKnown RBP21.87■■□□□ 1.09
ERCC3-207ENST00000490062 NFKBIEO00221 500 aa21.86■■□□□ 1.09
ERCC3-207ENST00000490062 GNAI2P04899 355 aa21.86■■□□□ 1.09
ERCC3-207ENST00000490062 CCDC85AQ96PX6 553 aaPredicted RBP21.86■■□□□ 1.09
ERCC3-207ENST00000490062 PSMD1Q99460 953 aa21.86■■□□□ 1.09
ERCC3-207ENST00000490062 LRRFIP2Q9Y608 721 aaKnown RBP21.86■■□□□ 1.09
ERCC3-207ENST00000490062 LTBP1Q14766 1721 aa21.86■■□□□ 1.09
ERCC3-207ENST00000490062 CCDC57Q2TAC2 916 aa21.85■■□□□ 1.09
ERCC3-207ENST00000490062 C20orf194Q5TEA3 1177 aa21.85■■□□□ 1.09
ERCC3-207ENST00000490062 RTFDC1Q9BY42 306 aaPredicted RBP21.85■■□□□ 1.09
ERCC3-207ENST00000490062 IGHMBP2P38935 993 aaKnown RBP21.84■■□□□ 1.09
ERCC3-207ENST00000490062 PODXL2Q9NZ53 605 aa21.84■■□□□ 1.09
ERCC3-207ENST00000490062 COG6Q9Y2V7 657 aa21.84■■□□□ 1.09
ERCC3-207ENST00000490062 CHD4Q14839 1912 aa21.84■■□□□ 1.09
ERCC3-207ENST00000490062 UTRNP46939 3433 aa21.84■■□□□ 1.09
ERCC3-207ENST00000490062 SBF1O95248 1867 aa21.83■■□□□ 1.09
ERCC3-207ENST00000490062 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
ERCC3-207ENST00000490062 FKBP4Q02790 459 aaKnown RBP eCLIP21.83■■□□□ 1.09
ERCC3-207ENST00000490062 ARHGAP27Q6ZUM4 889 aa21.83■■□□□ 1.09
ERCC3-207ENST00000490062 TMX4Q9H1E5 349 aaPredicted RBP21.83■■□□□ 1.09
ERCC3-207ENST00000490062 VPS33BQ9H267 617 aa21.83■■□□□ 1.09
ERCC3-207ENST00000490062 ZBTB40Q9NUA8 1239 aa21.83■■□□□ 1.09
ERCC3-207ENST00000490062 OLFM4Q6UX06 510 aa21.82■■□□□ 1.08
ERCC3-207ENST00000490062 TAOK3Q9H2K8 898 aa21.82■■□□□ 1.08
ERCC3-207ENST00000490062 FBXO3Q9UK99 471 aa21.82■■□□□ 1.08
ERCC3-207ENST00000490062 DUOX1Q9NRD9 1551 aa21.82■■□□□ 1.08
ERCC3-207ENST00000490062 CHMP3Q9Y3E7 222 aa21.81■■□□□ 1.08
ERCC3-207ENST00000490062 MPNDQ8N594 471 aa21.8■■□□□ 1.08
ERCC3-207ENST00000490062 MPHOSPH8Q99549 860 aa21.8■■□□□ 1.08
ERCC3-207ENST00000490062 ZNF219Q9P2Y4 722 aaPredicted RBP21.8■■□□□ 1.08
ERCC3-207ENST00000490062 MINPP1Q9UNW1 487 aa21.8■■□□□ 1.08
ERCC3-207ENST00000490062 SPEF2Q9C093 1822 aa21.79■■□□□ 1.08
ERCC3-207ENST00000490062 PTPN12Q05209 780 aaKnown RBP21.79■■□□□ 1.08
ERCC3-207ENST00000490062 SLC51AQ86UW1 340 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms