RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 TMX4Q9H1E5 349 aaPredicted RBP28.89■■■□□ 2.22
LSM10-203ENST00000489912 GPBP1L1Q9HC44 474 aaPredicted RBP28.89■■■□□ 2.22
LSM10-203ENST00000489912 LTBP3Q9NS15 1303 aa28.89■■■□□ 2.21
LSM10-203ENST00000489912 FKBP4Q02790 459 aaKnown RBP eCLIP28.88■■■□□ 2.21
LSM10-203ENST00000489912 ZNF277Q9NRM2 450 aaPredicted RBP28.88■■■□□ 2.21
LSM10-203ENST00000489912 CDHR2Q9BYE9 1310 aa28.88■■■□□ 2.21
LSM10-203ENST00000489912 ALDH1L2Q3SY69 923 aa28.87■■■□□ 2.21
LSM10-203ENST00000489912 BEND3Q5T5X7 828 aa28.87■■■□□ 2.21
LSM10-203ENST00000489912 BBOX1O75936 387 aa28.86■■■□□ 2.21
LSM10-203ENST00000489912 CC2D2BQ6DHV5 1058 aa28.86■■■□□ 2.21
LSM10-203ENST00000489912 CELF1Q92879 486 aaKnown RBP28.86■■■□□ 2.21
LSM10-203ENST00000489912 ATP6V0A2Q9Y487 856 aa28.86■■■□□ 2.21
LSM10-203ENST00000489912 COL4A1P02462 1669 aa28.86■■■□□ 2.21
LSM10-203ENST00000489912 H7C1W4 665 aa28.85■■■□□ 2.21
LSM10-203ENST00000489912 CT47B1P0C2W7 299 aaPredicted RBP28.85■■■□□ 2.21
LSM10-203ENST00000489912 CCDC152Q4G0S7 254 aa28.85■■■□□ 2.21
LSM10-203ENST00000489912 SEC31BQ9NQW1 1179 aa28.85■■■□□ 2.21
LSM10-203ENST00000489912 CTSWP56202 376 aa28.83■■■□□ 2.21
LSM10-203ENST00000489912 PTPRCP08575 1304 aa28.83■■■□□ 2.21
LSM10-203ENST00000489912 SPEF2Q9C093 1822 aa28.83■■■□□ 2.21
LSM10-203ENST00000489912 SRCIN1Q9C0H9 1055 aa28.82■■■□□ 2.2
LSM10-203ENST00000489912 ZBED9Q6R2W3 1325 aa28.82■■■□□ 2.2
LSM10-203ENST00000489912 SNED1Q8TER0 1413 aa28.82■■■□□ 2.2
LSM10-203ENST00000489912 SP8Q8IXZ3 490 aa28.81■■■□□ 2.2
LSM10-203ENST00000489912 IARSP41252 1262 aaKnown RBP28.8■■■□□ 2.2
LSM10-203ENST00000489912 PSMD1Q99460 953 aa28.8■■■□□ 2.2
LSM10-203ENST00000489912 RARSP54136 660 aaKnown RBP28.79■■■□□ 2.2
LSM10-203ENST00000489912 CASP7P55210 303 aa28.79■■■□□ 2.2
LSM10-203ENST00000489912 RPS8P62241 208 aaKnown RBP28.79■■■□□ 2.2
LSM10-203ENST00000489912 GRIPAP1Q4V328 841 aa28.79■■■□□ 2.2
LSM10-203ENST00000489912 C9orf78Q9NZ63 289 aaPredicted RBP28.79■■■□□ 2.2
LSM10-203ENST00000489912 LRRC37AA6NMS7 1700 aa28.78■■■□□ 2.2
LSM10-203ENST00000489912 ZC3H4Q9UPT8 1303 aaKnown RBP28.78■■■□□ 2.2
LSM10-203ENST00000489912 ALDH1L1O75891 902 aa28.78■■■□□ 2.2
LSM10-203ENST00000489912 DPP8Q6V1X1 898 aaPredicted RBP28.78■■■□□ 2.2
LSM10-203ENST00000489912 TMC4Q7Z404 712 aa28.78■■■□□ 2.2
LSM10-203ENST00000489912 MPNDQ8N594 471 aa28.78■■■□□ 2.2
LSM10-203ENST00000489912 TTLL11Q8NHH1 800 aa28.78■■■□□ 2.2
LSM10-203ENST00000489912 GREM2Q9H772 168 aa28.78■■■□□ 2.2
LSM10-203ENST00000489912 NOB1Q9ULX3 412 aaKnown RBP28.78■■■□□ 2.2
LSM10-203ENST00000489912 KDM2BQ8NHM5 1336 aa28.77■■■□□ 2.2
LSM10-203ENST00000489912 GRM8O00222 908 aa28.77■■■□□ 2.2
LSM10-203ENST00000489912 NMRK2Q9NPI5 230 aa28.77■■■□□ 2.2
LSM10-203ENST00000489912 ANKRD18AQ8IVF6 992 aa28.75■■■□□ 2.19
LSM10-203ENST00000489912 LARGE2Q8N3Y3 721 aa28.74■■■□□ 2.19
LSM10-203ENST00000489912 PLA2G12BQ9BX93 195 aa28.74■■■□□ 2.19
LSM10-203ENST00000489912 NSFL1CQ9UNZ2 370 aaKnown RBP28.74■■■□□ 2.19
LSM10-203ENST00000489912 CHMP3Q9Y3E7 222 aa28.74■■■□□ 2.19
LSM10-203ENST00000489912 GLTPD2A6NH11 291 aa28.73■■■□□ 2.19
LSM10-203ENST00000489912 PPIP5K2O43314 1243 aa28.73■■■□□ 2.19
LSM10-203ENST00000489912 FAM161AQ3B820 660 aa28.73■■■□□ 2.19
LSM10-203ENST00000489912 DPY19L2Q6NUT2 758 aa28.73■■■□□ 2.19
LSM10-203ENST00000489912 JDP2Q8WYK2 163 aa28.73■■■□□ 2.19
LSM10-203ENST00000489912 CDC5LQ99459 802 aaKnown RBP28.73■■■□□ 2.19
LSM10-203ENST00000489912 GPSM2P81274 684 aa28.72■■■□□ 2.19
LSM10-203ENST00000489912 AOC3Q16853 763 aa28.72■■■□□ 2.19
LSM10-203ENST00000489912 SUPT20HQ8NEM7 779 aa28.72■■■□□ 2.19
LSM10-203ENST00000489912 RRAGCQ9HB90 399 aa28.72■■■□□ 2.19
LSM10-203ENST00000489912 COL4A5P29400 1685 aa28.71■■■□□ 2.19
LSM10-203ENST00000489912 BCAR3O75815 825 aa28.7■■■□□ 2.18
LSM10-203ENST00000489912 ITGA6P23229 1130 aa28.7■■■□□ 2.18
LSM10-203ENST00000489912 FOXO4P98177 505 aa28.7■■■□□ 2.18
LSM10-203ENST00000489912 DUOX1Q9NRD9 1551 aa28.7■■■□□ 2.18
LSM10-203ENST00000489912 KIF16BQ96L93 1317 aa28.69■■■□□ 2.18
LSM10-203ENST00000489912 ZNF541Q9H0D2 1346 aa28.69■■■□□ 2.18
LSM10-203ENST00000489912 KIF3CO14782 793 aa28.69■■■□□ 2.18
LSM10-203ENST00000489912 NBPF7P0C2Y1 421 aaPredicted RBP28.69■■■□□ 2.18
LSM10-203ENST00000489912 EPHA10Q5JZY3 1008 aa28.69■■■□□ 2.18
LSM10-203ENST00000489912 FRAT1Q92837 279 aaPredicted RBP28.69■■■□□ 2.18
LSM10-203ENST00000489912 RTFDC1Q9BY42 306 aaPredicted RBP28.69■■■□□ 2.18
LSM10-203ENST00000489912 API5Q9BZZ5 524 aaKnown RBP28.69■■■□□ 2.18
LSM10-203ENST00000489912 ANKIB1Q9P2G1 1089 aa28.69■■■□□ 2.18
LSM10-203ENST00000489912 RTL9Q8NET4 1388 aa28.69■■■□□ 2.18
LSM10-203ENST00000489912 C6orf229H3BNL8 230 aa28.68■■■□□ 2.18
LSM10-203ENST00000489912 DDNO94850 711 aaPredicted RBP28.68■■■□□ 2.18
LSM10-203ENST00000489912 CSF1RP07333 972 aa28.68■■■□□ 2.18
LSM10-203ENST00000489912 BRPF1P55201 1214 aaPredicted RBP28.68■■■□□ 2.18
LSM10-203ENST00000489912 NIM1KQ8IY84 436 aa28.68■■■□□ 2.18
LSM10-203ENST00000489912 SUCLG2Q96I99 432 aa28.68■■■□□ 2.18
LSM10-203ENST00000489912 IGHMBP2P38935 993 aaKnown RBP28.67■■■□□ 2.18
LSM10-203ENST00000489912 LMBR1LQ6UX01 489 aa28.67■■■□□ 2.18
LSM10-203ENST00000489912 LTBP1Q14766 1721 aa28.66■■■□□ 2.18
LSM10-203ENST00000489912 GPR101Q96P66 508 aaPredicted RBP28.66■■■□□ 2.18
LSM10-203ENST00000489912 ANKRD18BA2A2Z9 1011 aa28.65■■■□□ 2.18
LSM10-203ENST00000489912 RIMBP2O15034 1052 aa28.65■■■□□ 2.18
LSM10-203ENST00000489912 POLLQ9UGP5 575 aa28.65■■■□□ 2.18
LSM10-203ENST00000489912 FZD9O00144 591 aa28.64■■■□□ 2.18
LSM10-203ENST00000489912 CCT4P50991 539 aaKnown RBP28.64■■■□□ 2.18
LSM10-203ENST00000489912 EIF6P56537 245 aaKnown RBP28.64■■■□□ 2.18
LSM10-203ENST00000489912 IFIT5Q13325 482 aaKnown RBP28.64■■■□□ 2.18
LSM10-203ENST00000489912 C16orf71Q8IYS4 520 aaPredicted RBP28.64■■■□□ 2.18
LSM10-203ENST00000489912 WDR90Q96KV7 1748 aa28.63■■■□□ 2.17
LSM10-203ENST00000489912 UFL1O94874 794 aa28.63■■■□□ 2.17
LSM10-203ENST00000489912 KIAA2012Q0VF49 1180 aa28.63■■■□□ 2.17
LSM10-203ENST00000489912 TBC1D16Q8TBP0 767 aa28.63■■■□□ 2.17
LSM10-203ENST00000489912 MPHOSPH8Q99549 860 aa28.63■■■□□ 2.17
LSM10-203ENST00000489912 BSDC1Q9NW68 430 aaPredicted RBP28.63■■■□□ 2.17
LSM10-203ENST00000489912 GJA3Q9Y6H8 435 aa28.63■■■□□ 2.17
LSM10-203ENST00000489912 UTYO14607 1347 aa28.63■■■□□ 2.17
LSM10-203ENST00000489912 IPO8O15397 1037 aaKnown RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms