RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 IVNS1ABPQ9Y6Y0 642 aa9.86□□□□□ -0.83
CCDC39-206ENST00000489868 ELOA3CA0A087WX78 387 aaPredicted RBP9.85□□□□□ -0.83
CCDC39-206ENST00000489868 SOWAHDA6NJG2 315 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 ELOA3DA6NLF2 546 aaPredicted RBP9.85□□□□□ -0.83
CCDC39-206ENST00000489868 ZBTB42B2RXF5 422 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 MAP3K6O95382 1288 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 RARAP10276 462 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 ADH7P40394 386 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 ELOA3BQ3SY89 546 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 ELOA3Q8NG57 546 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 BTBD6Q96KE9 485 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 IGFLR1Q9H665 355 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 EFCC1Q9HA90 598 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 STARD13Q9Y3M8 1113 aa9.85□□□□□ -0.83
CCDC39-206ENST00000489868 MMP20O60882 483 aa9.84□□□□□ -0.83
CCDC39-206ENST00000489868 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
CCDC39-206ENST00000489868 MZF1P28698 734 aaPredicted RBP9.84□□□□□ -0.83
CCDC39-206ENST00000489868 SNRPNP63162 240 aaKnown RBP9.84□□□□□ -0.83
CCDC39-206ENST00000489868 KCNA1Q09470 495 aa9.84□□□□□ -0.83
CCDC39-206ENST00000489868 CHSY3Q70JA7 882 aa9.84□□□□□ -0.83
CCDC39-206ENST00000489868 UBE2OQ9C0C9 1292 aaKnown RBP9.84□□□□□ -0.83
CCDC39-206ENST00000489868 DNAJB12Q9NXW2 375 aaKnown RBP9.84□□□□□ -0.83
CCDC39-206ENST00000489868 NAGPAQ9UK23 515 aa9.84□□□□□ -0.83
CCDC39-206ENST00000489868 TBC1D8BQ0IIM8 1120 aa9.83□□□□□ -0.84
CCDC39-206ENST00000489868 ALKBH2Q6NS38 261 aa9.83□□□□□ -0.84
CCDC39-206ENST00000489868 DHX32Q7L7V1 743 aaKnown RBP9.83□□□□□ -0.84
CCDC39-206ENST00000489868 NLRP13Q86W25 1043 aa9.83□□□□□ -0.84
CCDC39-206ENST00000489868 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
CCDC39-206ENST00000489868 TMEM63CQ9P1W3 806 aa9.83□□□□□ -0.84
CCDC39-206ENST00000489868 AAMPQ13685 434 aa9.82□□□□□ -0.84
CCDC39-206ENST00000489868 ENAMQ9NRM1 1142 aa9.82□□□□□ -0.84
CCDC39-206ENST00000489868 SLC6A14Q9UN76 642 aa9.82□□□□□ -0.84
CCDC39-206ENST00000489868 MLLT1Q03111 559 aaPredicted RBP9.81□□□□□ -0.84
CCDC39-206ENST00000489868 TLR7Q9NYK1 1049 aaKnown RBP9.81□□□□□ -0.84
CCDC39-206ENST00000489868 AMPD1P23109 780 aa9.8□□□□□ -0.84
CCDC39-206ENST00000489868 DGKGP49619 791 aa9.8□□□□□ -0.84
CCDC39-206ENST00000489868 C8orf86Q6ZUL3 223 aa9.8□□□□□ -0.84
CCDC39-206ENST00000489868 GJD3Q8N144 294 aa9.8□□□□□ -0.84
CCDC39-206ENST00000489868 TRPM4Q8TD43 1214 aa9.8□□□□□ -0.84
CCDC39-206ENST00000489868 FNDC3AQ9Y2H6 1198 aaKnown RBP9.8□□□□□ -0.84
CCDC39-206ENST00000489868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.8□□□□□ -0.84
CCDC39-206ENST00000489868 CNTNAP5Q8WYK1 1306 aa9.8□□□□□ -0.84
CCDC39-206ENST00000489868 FAM181BA6NEQ2 426 aa9.79□□□□□ -0.84
CCDC39-206ENST00000489868 ALBP02768 609 aa9.79□□□□□ -0.84
CCDC39-206ENST00000489868 CYP2E1P05181 493 aaPredicted RBP9.79□□□□□ -0.84
CCDC39-206ENST00000489868 C8orf34Q49A92 452 aa9.79□□□□□ -0.84
CCDC39-206ENST00000489868 COL13A1Q5TAT6 717 aaPredicted RBP9.79□□□□□ -0.84
CCDC39-206ENST00000489868 AEBP1Q8IUX7 1158 aa9.79□□□□□ -0.84
CCDC39-206ENST00000489868 ELP3Q9H9T3 547 aa9.79□□□□□ -0.84
CCDC39-206ENST00000489868 ALAS2P22557 587 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 GPLD1P80108 840 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 PDE12Q6L8Q7 609 aaKnown RBP9.78□□□□□ -0.84
CCDC39-206ENST00000489868 XKR5Q6UX68 686 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 LINC00114Q6XXX2 140 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 C20orf204Q6ZNR8 217 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 HFE2Q6ZVN8 426 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 ZNF438Q7Z4V0 828 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 RRAGCQ9HB90 399 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 CNTN3Q9P232 1028 aa9.78□□□□□ -0.84
CCDC39-206ENST00000489868 PLAURQ03405 335 aa9.77□□□□□ -0.85
CCDC39-206ENST00000489868 OR13H1Q8NG92 308 aa9.77□□□□□ -0.85
CCDC39-206ENST00000489868 NSUN5Q96P11 429 aaKnown RBP9.77□□□□□ -0.85
CCDC39-206ENST00000489868 ABI2Q9NYB9 513 aaPredicted RBP9.77□□□□□ -0.85
CCDC39-206ENST00000489868 HOXD8P13378 290 aaPredicted RBP9.76□□□□□ -0.85
CCDC39-206ENST00000489868 CPB1P15086 417 aa9.76□□□□□ -0.85
CCDC39-206ENST00000489868 SOX18P35713 384 aa9.76□□□□□ -0.85
CCDC39-206ENST00000489868 NRLP54845 237 aa9.76□□□□□ -0.85
CCDC39-206ENST00000489868 COL9A3Q14050 684 aaPredicted RBP9.76□□□□□ -0.85
CCDC39-206ENST00000489868 FAM35AQ86V20 835 aa9.76□□□□□ -0.85
CCDC39-206ENST00000489868 MICALL1Q8N3F8 863 aa9.76□□□□□ -0.85
CCDC39-206ENST00000489868 CHRDQ9H2X0 955 aa9.76□□□□□ -0.85
CCDC39-206ENST00000489868 BRPF3Q9ULD4 1205 aa9.76□□□□□ -0.85
CCDC39-206ENST00000489868 J3QW42 95 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 M0R082 166 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 IGHA2P01877 340 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 PSAPP07602 524 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 PCSK2P16519 638 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 GSK3AP49840 483 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 MARSP56192 900 aaKnown RBP9.75□□□□□ -0.85
CCDC39-206ENST00000489868 PERM1Q5SV97 790 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 C1orf127Q8N9H9 656 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 ZNF417Q8TAU3 575 aa9.75□□□□□ -0.85
CCDC39-206ENST00000489868 ZNF587Q96SQ5 575 aaPredicted RBP9.75□□□□□ -0.85
CCDC39-206ENST00000489868 FOXD3Q9UJU5 478 aaPredicted RBP9.75□□□□□ -0.85
CCDC39-206ENST00000489868 RPLP1P05386 114 aaKnown RBP9.74□□□□□ -0.85
CCDC39-206ENST00000489868 PSAPL1Q6NUJ1 521 aa9.74□□□□□ -0.85
CCDC39-206ENST00000489868 LPIN3Q9BQK8 851 aa9.74□□□□□ -0.85
CCDC39-206ENST00000489868 BIN2Q9UBW5 565 aaPredicted RBP9.74□□□□□ -0.85
CCDC39-206ENST00000489868 TNFRSF21O75509 655 aa9.73□□□□□ -0.85
CCDC39-206ENST00000489868 USP5P45974 858 aa9.73□□□□□ -0.85
CCDC39-206ENST00000489868 TTC39BQ5VTQ0 682 aaPredicted RBP9.73□□□□□ -0.85
CCDC39-206ENST00000489868 KANK3Q6NY19 840 aa9.73□□□□□ -0.85
CCDC39-206ENST00000489868 NUDT8Q8WV74 236 aa9.73□□□□□ -0.85
CCDC39-206ENST00000489868 FAM129BQ96TA1 746 aa9.73□□□□□ -0.85
CCDC39-206ENST00000489868 KANSL3Q9P2N6 904 aa9.73□□□□□ -0.85
CCDC39-206ENST00000489868 LOC102724428A0A0B4J2F2 783 aa9.72□□□□□ -0.85
CCDC39-206ENST00000489868 SIK1P57059 783 aa9.72□□□□□ -0.85
CCDC39-206ENST00000489868 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms