RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 KIAA2012Q0VF49 1180 aa13.2□□□□□ -0.3
CSF3R-213ENST00000489551 VPS33BQ9H267 617 aa13.2□□□□□ -0.3
CSF3R-213ENST00000489551 CHPF2Q9P2E5 772 aa13.2□□□□□ -0.3
CSF3R-213ENST00000489551 TRMT112Q9UI30 125 aaKnown RBP13.2□□□□□ -0.3
CSF3R-213ENST00000489551 ABT1Q9ULW3 272 aaKnown RBP13.2□□□□□ -0.3
CSF3R-213ENST00000489551 GMPSP49915 693 aaPredicted RBP13.19□□□□□ -0.3
CSF3R-213ENST00000489551 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
CSF3R-213ENST00000489551 GRAPQ13588 217 aa13.19□□□□□ -0.3
CSF3R-213ENST00000489551 CYP4F22Q6NT55 531 aa13.19□□□□□ -0.3
CSF3R-213ENST00000489551 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
CSF3R-213ENST00000489551 MPNDQ8N594 471 aa13.19□□□□□ -0.3
CSF3R-213ENST00000489551 GRAPLQ8TC17 118 aaPredicted RBP13.19□□□□□ -0.3
CSF3R-213ENST00000489551 ADARB2Q9NS39 739 aaKnown RBP13.19□□□□□ -0.3
CSF3R-213ENST00000489551 CASP8AP2Q9UKL3 1982 aa13.19□□□□□ -0.3
CSF3R-213ENST00000489551 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
CSF3R-213ENST00000489551 RAD17O75943 681 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 LMOD3Q0VAK6 560 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 TRPM4Q8TD43 1214 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 CELF1Q92879 486 aaKnown RBP13.18□□□□□ -0.3
CSF3R-213ENST00000489551 RUNDC1Q96C34 613 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
CSF3R-213ENST00000489551 PGAP2Q9UHJ9 254 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 LAS1LQ9Y4W2 734 aaKnown RBP13.18□□□□□ -0.3
CSF3R-213ENST00000489551 TLL2Q9Y6L7 1015 aa13.18□□□□□ -0.3
CSF3R-213ENST00000489551 ATP5J2-PTCD1G3V325 749 aa13.17□□□□□ -0.3
CSF3R-213ENST00000489551 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
CSF3R-213ENST00000489551 DLK2Q6UY11 383 aa13.17□□□□□ -0.3
CSF3R-213ENST00000489551 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
CSF3R-213ENST00000489551 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
CSF3R-213ENST00000489551 PLBD2Q8NHP8 589 aa13.17□□□□□ -0.3
CSF3R-213ENST00000489551 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
CSF3R-213ENST00000489551 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
CSF3R-213ENST00000489551 PSME4Q14997 1843 aa13.17□□□□□ -0.3
CSF3R-213ENST00000489551 AOC2O75106 756 aa13.16□□□□□ -0.3
CSF3R-213ENST00000489551 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
CSF3R-213ENST00000489551 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
CSF3R-213ENST00000489551 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
CSF3R-213ENST00000489551 EGFRP00533 1210 aa13.15□□□□□ -0.3
CSF3R-213ENST00000489551 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
CSF3R-213ENST00000489551 MAP2K1Q02750 393 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-213ENST00000489551 SF3B3Q15393 1217 aaKnown RBP13.15□□□□□ -0.3
CSF3R-213ENST00000489551 RTL5Q5HYW3 569 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-213ENST00000489551 DUSP27Q5VZP5 1158 aa13.15□□□□□ -0.3
CSF3R-213ENST00000489551 SAPCD2Q86UD0 394 aa13.15□□□□□ -0.3
CSF3R-213ENST00000489551 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-213ENST00000489551 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
CSF3R-213ENST00000489551 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
CSF3R-213ENST00000489551 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-213ENST00000489551 ZNF646O15015 1829 aaPredicted RBP13.14□□□□□ -0.31
CSF3R-213ENST00000489551 SPEF2Q9C093 1822 aa13.14□□□□□ -0.31
CSF3R-213ENST00000489551 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
CSF3R-213ENST00000489551 HOXB7P09629 217 aa13.14□□□□□ -0.31
CSF3R-213ENST00000489551 GRM1Q13255 1194 aa13.14□□□□□ -0.31
CSF3R-213ENST00000489551 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
CSF3R-213ENST00000489551 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
CSF3R-213ENST00000489551 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
CSF3R-213ENST00000489551 CNOT7Q9UIV1 285 aaKnown RBP13.14□□□□□ -0.31
CSF3R-213ENST00000489551 RTL9Q8NET4 1388 aa13.13□□□□□ -0.31
CSF3R-213ENST00000489551 PSMD14O00487 310 aa13.13□□□□□ -0.31
CSF3R-213ENST00000489551 GPSM2P81274 684 aa13.13□□□□□ -0.31
CSF3R-213ENST00000489551 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
CSF3R-213ENST00000489551 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
CSF3R-213ENST00000489551 ZIC5Q96T25 663 aa13.13□□□□□ -0.31
CSF3R-213ENST00000489551 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
CSF3R-213ENST00000489551 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
CSF3R-213ENST00000489551 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
CSF3R-213ENST00000489551 MYH3P11055 1940 aa13.13□□□□□ -0.31
CSF3R-213ENST00000489551 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
CSF3R-213ENST00000489551 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
CSF3R-213ENST00000489551 TNIP1Q15025 636 aa13.12□□□□□ -0.31
CSF3R-213ENST00000489551 SAMD7Q7Z3H4 446 aa13.12□□□□□ -0.31
CSF3R-213ENST00000489551 TMC4Q7Z404 712 aa13.12□□□□□ -0.31
CSF3R-213ENST00000489551 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
CSF3R-213ENST00000489551 ABHD8Q96I13 439 aa13.12□□□□□ -0.31
CSF3R-213ENST00000489551 BCL2L13Q9BXK5 485 aa13.12□□□□□ -0.31
CSF3R-213ENST00000489551 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
CSF3R-213ENST00000489551 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
CSF3R-213ENST00000489551 IRS4O14654 1257 aaPredicted RBP13.11□□□□□ -0.31
CSF3R-213ENST00000489551 ECE1P42892 770 aa13.11□□□□□ -0.31
CSF3R-213ENST00000489551 WDR43Q15061 677 aaKnown RBP eCLIP13.11□□□□□ -0.31
CSF3R-213ENST00000489551 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
CSF3R-213ENST00000489551 WASHC4Q2M389 1173 aa13.11□□□□□ -0.31
CSF3R-213ENST00000489551 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
CSF3R-213ENST00000489551 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
CSF3R-213ENST00000489551 ELL2O00472 640 aaPredicted RBP13.1□□□□□ -0.31
CSF3R-213ENST00000489551 ECE2O60344 883 aa13.1□□□□□ -0.31
CSF3R-213ENST00000489551 MAP2K2P36507 400 aa13.1□□□□□ -0.31
CSF3R-213ENST00000489551 CDC37L1Q7L3B6 337 aa13.1□□□□□ -0.31
CSF3R-213ENST00000489551 USP48Q86UV5 1035 aa13.1□□□□□ -0.31
CSF3R-213ENST00000489551 TBC1D16Q8TBP0 767 aa13.1□□□□□ -0.31
CSF3R-213ENST00000489551 DPF2Q92785 391 aa13.1□□□□□ -0.31
CSF3R-213ENST00000489551 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
CSF3R-213ENST00000489551 PRKRIP1Q9H875 184 aaPredicted RBP13.1□□□□□ -0.31
CSF3R-213ENST00000489551 ZNF408Q9H9D4 720 aa13.1□□□□□ -0.31
CSF3R-213ENST00000489551 APAF1O14727 1248 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms