RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CELF1Q92879 486 aaKnown RBP15.6■□□□□ 0.09
SMARCD3-213ENST00000489503 DICER1Q9UPY3 1922 aaKnown RBP15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 PDE8AO60658 829 aa15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 LMNB1P20700 586 aa15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 RARSP54136 660 aaKnown RBP15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 CASP7P55210 303 aa15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 GRAPQ13588 217 aa15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 SOGA3Q5TF21 947 aa15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 GRAPLQ8TC17 118 aaPredicted RBP15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
SMARCD3-213ENST00000489503 H7C1W4 665 aa15.58■□□□□ 0.08
SMARCD3-213ENST00000489503 CT47B1P0C2W7 299 aaPredicted RBP15.58■□□□□ 0.08
SMARCD3-213ENST00000489503 CTSWP56202 376 aa15.58■□□□□ 0.08
SMARCD3-213ENST00000489503 ZNF277Q9NRM2 450 aaPredicted RBP15.58■□□□□ 0.08
SMARCD3-213ENST00000489503 PTPRCP08575 1304 aa15.58■□□□□ 0.08
SMARCD3-213ENST00000489503 LTBP3Q9NS15 1303 aa15.58■□□□□ 0.08
SMARCD3-213ENST00000489503 DUOX1Q9NRD9 1551 aa15.58■□□□□ 0.08
SMARCD3-213ENST00000489503 COL4A5P29400 1685 aa15.57■□□□□ 0.08
SMARCD3-213ENST00000489503 FKBP4Q02790 459 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMARCD3-213ENST00000489503 SRCIN1Q9C0H9 1055 aa15.57■□□□□ 0.08
SMARCD3-213ENST00000489503 NOB1Q9ULX3 412 aaKnown RBP15.57■□□□□ 0.08
SMARCD3-213ENST00000489503 CCDC152Q4G0S7 254 aa15.56■□□□□ 0.08
SMARCD3-213ENST00000489503 GREM2Q9H772 168 aa15.56■□□□□ 0.08
SMARCD3-213ENST00000489503 ATP6V0A2Q9Y487 856 aa15.56■□□□□ 0.08
SMARCD3-213ENST00000489503 BCAR3O75815 825 aa15.55■□□□□ 0.08
SMARCD3-213ENST00000489503 FAM161AQ3B820 660 aa15.55■□□□□ 0.08
SMARCD3-213ENST00000489503 RTKN2Q8IZC4 609 aa15.55■□□□□ 0.08
SMARCD3-213ENST00000489503 TTLL11Q8NHH1 800 aa15.55■□□□□ 0.08
SMARCD3-213ENST00000489503 TNNQ9UQP3 1299 aa15.55■□□□□ 0.08
SMARCD3-213ENST00000489503 LTBP1Q14766 1721 aa15.54■□□□□ 0.08
SMARCD3-213ENST00000489503 GRM8O00222 908 aa15.54■□□□□ 0.08
SMARCD3-213ENST00000489503 ALDH1L1O75891 902 aa15.54■□□□□ 0.08
SMARCD3-213ENST00000489503 BBOX1O75936 387 aa15.54■□□□□ 0.08
SMARCD3-213ENST00000489503 HSP90B1P14625 803 aaKnown RBP15.54■□□□□ 0.08
SMARCD3-213ENST00000489503 EPHA10Q5JZY3 1008 aa15.54■□□□□ 0.08
SMARCD3-213ENST00000489503 IARSP41252 1262 aaKnown RBP15.53■□□□□ 0.08
SMARCD3-213ENST00000489503 CC2D2BQ6DHV5 1058 aa15.53■□□□□ 0.08
SMARCD3-213ENST00000489503 SP8Q8IXZ3 490 aa15.53■□□□□ 0.08
SMARCD3-213ENST00000489503 PLA2G12BQ9BX93 195 aa15.53■□□□□ 0.08
SMARCD3-213ENST00000489503 GPBP1L1Q9HC44 474 aaPredicted RBP15.53■□□□□ 0.08
SMARCD3-213ENST00000489503 C9orf78Q9NZ63 289 aaPredicted RBP15.53■□□□□ 0.08
SMARCD3-213ENST00000489503 KIF16BQ96L93 1317 aa15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 NBPF7P0C2Y1 421 aaPredicted RBP15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 RPS8P62241 208 aaKnown RBP15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 DPP8Q6V1X1 898 aaPredicted RBP15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 SUCLG2Q96I99 432 aa15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 GPR101Q96P66 508 aaPredicted RBP15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 PSMD1Q99460 953 aa15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 NMRK2Q9NPI5 230 aa15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 CHMP3Q9Y3E7 222 aa15.52■□□□□ 0.08
SMARCD3-213ENST00000489503 RTL9Q8NET4 1388 aa15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 ZNF541Q9H0D2 1346 aa15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 BRPF1P55201 1214 aaPredicted RBP15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 GPSM2P81274 684 aa15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 FOXO4P98177 505 aa15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 MPNDQ8N594 471 aa15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 FRAT1Q92837 279 aaPredicted RBP15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 YTHDC1Q96MU7 727 aaKnown RBP15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
SMARCD3-213ENST00000489503 PPIP5K2O43314 1243 aa15.5■□□□□ 0.07
SMARCD3-213ENST00000489503 ITGA6P23229 1130 aa15.5■□□□□ 0.07
SMARCD3-213ENST00000489503 AOC3Q16853 763 aa15.5■□□□□ 0.07
SMARCD3-213ENST00000489503 ANKRD18AQ8IVF6 992 aa15.5■□□□□ 0.07
SMARCD3-213ENST00000489503 KAZALD1Q96I82 304 aa15.5■□□□□ 0.07
SMARCD3-213ENST00000489503 API5Q9BZZ5 524 aaKnown RBP15.5■□□□□ 0.07
SMARCD3-213ENST00000489503 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
SMARCD3-213ENST00000489503 ZC3H4Q9UPT8 1303 aaKnown RBP15.49■□□□□ 0.07
SMARCD3-213ENST00000489503 CSF1RP07333 972 aa15.49■□□□□ 0.07
SMARCD3-213ENST00000489503 LMBR1LQ6UX01 489 aa15.49■□□□□ 0.07
SMARCD3-213ENST00000489503 TMC4Q7Z404 712 aa15.49■□□□□ 0.07
SMARCD3-213ENST00000489503 LARGE2Q8N3Y3 721 aa15.49■□□□□ 0.07
SMARCD3-213ENST00000489503 CDC5LQ99459 802 aaKnown RBP15.49■□□□□ 0.07
SMARCD3-213ENST00000489503 NSFL1CQ9UNZ2 370 aaKnown RBP15.49■□□□□ 0.07
SMARCD3-213ENST00000489503 UTYO14607 1347 aa15.48■□□□□ 0.07
SMARCD3-213ENST00000489503 TRIM27P14373 513 aa15.48■□□□□ 0.07
SMARCD3-213ENST00000489503 CLUAP1Q96AJ1 413 aa15.48■□□□□ 0.07
SMARCD3-213ENST00000489503 RTFDC1Q9BY42 306 aaPredicted RBP15.48■□□□□ 0.07
SMARCD3-213ENST00000489503 KIF3CO14782 793 aa15.47■□□□□ 0.07
SMARCD3-213ENST00000489503 CCT4P50991 539 aaKnown RBP15.47■□□□□ 0.07
SMARCD3-213ENST00000489503 ZNF594Q96JF6 807 aaPredicted RBP15.47■□□□□ 0.07
SMARCD3-213ENST00000489503 USP44Q9H0E7 712 aa15.47■□□□□ 0.07
SMARCD3-213ENST00000489503 BICC1Q9H694 974 aaKnown RBP15.47■□□□□ 0.07
SMARCD3-213ENST00000489503 POLLQ9UGP5 575 aa15.47■□□□□ 0.07
SMARCD3-213ENST00000489503 KDM2BQ8NHM5 1336 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 WDR90Q96KV7 1748 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 GLTPD2A6NH11 291 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 WTIPA6NIX2 430 aaPredicted RBP15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 C6orf229H3BNL8 230 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 RIMBP2O15034 1052 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 DDNO94850 711 aaPredicted RBP15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 UFL1O94874 794 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 GRIPAP1Q4V328 841 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 ATF7IPQ6VMQ6 1270 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 NIM1KQ8IY84 436 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 ANKRD44Q8N8A2 993 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 SUPT20HQ8NEM7 779 aa15.46■□□□□ 0.07
SMARCD3-213ENST00000489503 ANKRD18BA2A2Z9 1011 aa15.45■□□□□ 0.06
SMARCD3-213ENST00000489503 IGHMBP2P38935 993 aaKnown RBP15.45■□□□□ 0.06
SMARCD3-213ENST00000489503 KIAA2012Q0VF49 1180 aa15.45■□□□□ 0.06
SMARCD3-213ENST00000489503 TBC1D16Q8TBP0 767 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms