RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
TNRC6B-208ENST00000489500 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 FYB1O15117 783 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 CTHP32929 405 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 QPCTQ16769 361 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 TXNRD1Q16881 649 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 ZNF511Q8NB15 262 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 RAPGEF4Q8WZA2 1011 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 ACSBG1Q96GR2 724 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
TNRC6B-208ENST00000489500 BTAF1O14981 1849 aa12.16□□□□□ -0.46
TNRC6B-208ENST00000489500 SNRPBP14678 240 aaKnown RBP12.16□□□□□ -0.46
TNRC6B-208ENST00000489500 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
TNRC6B-208ENST00000489500 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
TNRC6B-208ENST00000489500 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
TNRC6B-208ENST00000489500 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
TNRC6B-208ENST00000489500 EIF4G2P78344 907 aaKnown RBP eCLIP12.15□□□□□ -0.46
TNRC6B-208ENST00000489500 POLR3GLQ9BT43 218 aa12.15□□□□□ -0.46
TNRC6B-208ENST00000489500 MAP10Q9P2G4 905 aa12.15□□□□□ -0.46
TNRC6B-208ENST00000489500 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 F12P00748 615 aaPredicted RBP12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 SLC27A3Q5K4L6 730 aa12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 TLL2Q9Y6L7 1015 aa12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 WASF2Q9Y6W5 498 aa12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 FLT4P35916 1363 aa12.14□□□□□ -0.47
TNRC6B-208ENST00000489500 LCE2AQ5TA79 106 aaPredicted RBP12.13□□□□□ -0.47
TNRC6B-208ENST00000489500 INSRP06213 1382 aa12.13□□□□□ -0.47
TNRC6B-208ENST00000489500 NSD3Q9BZ95 1437 aa12.12□□□□□ -0.47
TNRC6B-208ENST00000489500 LILRB3O75022 631 aa12.12□□□□□ -0.47
TNRC6B-208ENST00000489500 PTF1AQ7RTS3 328 aa12.12□□□□□ -0.47
TNRC6B-208ENST00000489500 TSC1Q92574 1164 aa12.12□□□□□ -0.47
TNRC6B-208ENST00000489500 MYOM1P52179 1685 aa12.12□□□□□ -0.47
TNRC6B-208ENST00000489500 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
TNRC6B-208ENST00000489500 TUSC1Q2TAM9 212 aa12.11□□□□□ -0.47
TNRC6B-208ENST00000489500 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
TNRC6B-208ENST00000489500 CASZ1Q86V15 1759 aa12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 FBLN1P23142 703 aa12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 VARSP26640 1264 aaKnown RBP12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 RTL5Q5HYW3 569 aaPredicted RBP12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 FOXJ1Q92949 421 aa12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 MTFR1LQ9H019 292 aa12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 PCDH11XQ9BZA7 1347 aa12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 PCDH11YQ9BZA8 1340 aa12.1□□□□□ -0.47
TNRC6B-208ENST00000489500 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
TNRC6B-208ENST00000489500 HSP90AB2PQ58FF8 381 aa12.09□□□□□ -0.47
TNRC6B-208ENST00000489500 NBPF6Q5VWK0 638 aa12.09□□□□□ -0.47
TNRC6B-208ENST00000489500 NBPF4Q96M43 638 aa12.09□□□□□ -0.47
TNRC6B-208ENST00000489500 POLR3EQ9NVU0 708 aa12.09□□□□□ -0.47
TNRC6B-208ENST00000489500 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
TNRC6B-208ENST00000489500 ZBTB7AO95365 584 aa12.08□□□□□ -0.48
TNRC6B-208ENST00000489500 SLC16A10Q8TF71 515 aa12.08□□□□□ -0.48
TNRC6B-208ENST00000489500 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
TNRC6B-208ENST00000489500 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
TNRC6B-208ENST00000489500 SPG7Q9UQ90 795 aa12.08□□□□□ -0.48
TNRC6B-208ENST00000489500 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
TNRC6B-208ENST00000489500 CAPN5O15484 640 aaPredicted RBP12.07□□□□□ -0.48
TNRC6B-208ENST00000489500 BMP1P13497 986 aa12.07□□□□□ -0.48
TNRC6B-208ENST00000489500 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
TNRC6B-208ENST00000489500 USHBP1Q8N6Y0 703 aa12.07□□□□□ -0.48
TNRC6B-208ENST00000489500 LY75O60449 1722 aa12.06□□□□□ -0.48
TNRC6B-208ENST00000489500 SHANK3Q9BYB0 1731 aa12.06□□□□□ -0.48
TNRC6B-208ENST00000489500 HSPA5P11021 654 aaKnown RBP12.06□□□□□ -0.48
TNRC6B-208ENST00000489500 POLD1P28340 1107 aa12.06□□□□□ -0.48
TNRC6B-208ENST00000489500 TRIM46Q7Z4K8 759 aa12.06□□□□□ -0.48
TNRC6B-208ENST00000489500 TFCP2L1Q9NZI6 479 aa12.06□□□□□ -0.48
TNRC6B-208ENST00000489500 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
TNRC6B-208ENST00000489500 MEGF6O75095 1541 aa12.06□□□□□ -0.48
TNRC6B-208ENST00000489500 NSD2O96028 1365 aa12.05□□□□□ -0.48
TNRC6B-208ENST00000489500 MPNDQ8N594 471 aa12.05□□□□□ -0.48
TNRC6B-208ENST00000489500 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
TNRC6B-208ENST00000489500 CCNL1Q9UK58 526 aaPredicted RBP12.05□□□□□ -0.48
TNRC6B-208ENST00000489500 EMILIN1Q9Y6C2 1016 aa12.05□□□□□ -0.48
TNRC6B-208ENST00000489500 WFS1O76024 890 aa12.04□□□□□ -0.48
TNRC6B-208ENST00000489500 NFX1Q12986 1120 aaKnown RBP12.04□□□□□ -0.48
TNRC6B-208ENST00000489500 NNTQ13423 1086 aa12.04□□□□□ -0.48
TNRC6B-208ENST00000489500 C4orf48Q5BLP8 95 aa12.04□□□□□ -0.48
TNRC6B-208ENST00000489500 FLAD1Q8NFF5 587 aa12.04□□□□□ -0.48
TNRC6B-208ENST00000489500 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
TNRC6B-208ENST00000489500 ITGB4P16144 1822 aa12.04□□□□□ -0.48
TNRC6B-208ENST00000489500 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
TNRC6B-208ENST00000489500 YY1P25490 414 aa12.03□□□□□ -0.48
TNRC6B-208ENST00000489500 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
TNRC6B-208ENST00000489500 FAM174AQ8TBP5 190 aa12.03□□□□□ -0.48
TNRC6B-208ENST00000489500 ARXQ96QS3 562 aa12.03□□□□□ -0.48
TNRC6B-208ENST00000489500 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
TNRC6B-208ENST00000489500 PANK3Q9H999 370 aa12.03□□□□□ -0.48
TNRC6B-208ENST00000489500 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
TNRC6B-208ENST00000489500 PKD1L3Q7Z443 1732 aa12.03□□□□□ -0.48
TNRC6B-208ENST00000489500 TNNT2P45379 298 aaPredicted RBP12.02□□□□□ -0.49
TNRC6B-208ENST00000489500 MORC1Q86VD1 984 aa12.02□□□□□ -0.49
TNRC6B-208ENST00000489500 KIFC2Q96AC6 838 aa12.02□□□□□ -0.49
TNRC6B-208ENST00000489500 LRRC4BQ9NT99 713 aa12.02□□□□□ -0.49
TNRC6B-208ENST00000489500 POLKQ9UBT6 870 aa12.02□□□□□ -0.49
TNRC6B-208ENST00000489500 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms