RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 CDHR2Q9BYE9 1310 aa15.54■□□□□ 0.08
SFXN3-207ENST00000489434 LBX1P52954 281 aa15.54■□□□□ 0.08
SFXN3-207ENST00000489434 GRAPQ13588 217 aa15.54■□□□□ 0.08
SFXN3-207ENST00000489434 CIAPIN1Q6FI81 312 aa15.54■□□□□ 0.08
SFXN3-207ENST00000489434 CCDC146Q8IYE0 955 aa15.54■□□□□ 0.08
SFXN3-207ENST00000489434 GRAPLQ8TC17 118 aaPredicted RBP15.54■□□□□ 0.08
SFXN3-207ENST00000489434 LTBP1Q14766 1721 aa15.54■□□□□ 0.08
SFXN3-207ENST00000489434 HOXB7P09629 217 aa15.53■□□□□ 0.08
SFXN3-207ENST00000489434 GMPSP49915 693 aaPredicted RBP15.53■□□□□ 0.08
SFXN3-207ENST00000489434 KIAA2012Q0VF49 1180 aa15.53■□□□□ 0.08
SFXN3-207ENST00000489434 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
SFXN3-207ENST00000489434 SLC51AQ86UW1 340 aa15.53■□□□□ 0.08
SFXN3-207ENST00000489434 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
SFXN3-207ENST00000489434 CAPNS2Q96L46 248 aa15.53■□□□□ 0.08
SFXN3-207ENST00000489434 CHPF2Q9P2E5 772 aa15.53■□□□□ 0.08
SFXN3-207ENST00000489434 LAMB2P55268 1798 aa15.53■□□□□ 0.08
SFXN3-207ENST00000489434 TRAF5O00463 557 aa15.52■□□□□ 0.08
SFXN3-207ENST00000489434 GRM1Q13255 1194 aa15.52■□□□□ 0.08
SFXN3-207ENST00000489434 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.08
SFXN3-207ENST00000489434 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.08
SFXN3-207ENST00000489434 DBF4Q9UBU7 674 aaPredicted RBP15.52■□□□□ 0.08
SFXN3-207ENST00000489434 RAD17O75943 681 aa15.51■□□□□ 0.07
SFXN3-207ENST00000489434 DDX10Q13206 875 aaKnown RBP15.51■□□□□ 0.07
SFXN3-207ENST00000489434 ZC3H15Q8WU90 426 aaKnown RBP15.51■□□□□ 0.07
SFXN3-207ENST00000489434 GPR101Q96P66 508 aaPredicted RBP15.51■□□□□ 0.07
SFXN3-207ENST00000489434 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
SFXN3-207ENST00000489434 H7C1D1 291 aa15.5■□□□□ 0.07
SFXN3-207ENST00000489434 HSPA8P11142 646 aaKnown RBP15.5■□□□□ 0.07
SFXN3-207ENST00000489434 HSP90B1P14625 803 aaKnown RBP15.5■□□□□ 0.07
SFXN3-207ENST00000489434 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
SFXN3-207ENST00000489434 CST9Q5W186 159 aa15.5■□□□□ 0.07
SFXN3-207ENST00000489434 TRIM35Q9UPQ4 493 aa15.5■□□□□ 0.07
SFXN3-207ENST00000489434 TLL2Q9Y6L7 1015 aa15.5■□□□□ 0.07
SFXN3-207ENST00000489434 CELF2O95319 508 aaKnown RBP15.49■□□□□ 0.07
SFXN3-207ENST00000489434 FMR1Q06787 632 aaKnown RBP eCLIP15.49■□□□□ 0.07
SFXN3-207ENST00000489434 WASHC4Q2M389 1173 aa15.49■□□□□ 0.07
SFXN3-207ENST00000489434 CYP4F22Q6NT55 531 aa15.49■□□□□ 0.07
SFXN3-207ENST00000489434 CFAP44Q96MT7 982 aa15.49■□□□□ 0.07
SFXN3-207ENST00000489434 CNOT7Q9UIV1 285 aaKnown RBP15.49■□□□□ 0.07
SFXN3-207ENST00000489434 MAP2K2P36507 400 aa15.48■□□□□ 0.07
SFXN3-207ENST00000489434 CDC37L1Q7L3B6 337 aa15.48■□□□□ 0.07
SFXN3-207ENST00000489434 FAM89AQ96GI7 184 aa15.48■□□□□ 0.07
SFXN3-207ENST00000489434 PGAP2Q9UHJ9 254 aa15.48■□□□□ 0.07
SFXN3-207ENST00000489434 NSFL1CQ9UNZ2 370 aaKnown RBP15.48■□□□□ 0.07
SFXN3-207ENST00000489434 TAF1P21675 1872 aa15.48■□□□□ 0.07
SFXN3-207ENST00000489434 ATP5J2-PTCD1G3V325 749 aa15.47■□□□□ 0.07
SFXN3-207ENST00000489434 C6orf229H3BNL8 230 aa15.47■□□□□ 0.07
SFXN3-207ENST00000489434 CALD1Q05682 793 aaKnown RBP15.47■□□□□ 0.07
SFXN3-207ENST00000489434 SF3B3Q15393 1217 aaKnown RBP15.47■□□□□ 0.07
SFXN3-207ENST00000489434 DUSP27Q5VZP5 1158 aa15.47■□□□□ 0.07
SFXN3-207ENST00000489434 ZNF428Q96B54 188 aa15.47■□□□□ 0.07
SFXN3-207ENST00000489434 ISCA1Q9BUE6 129 aa15.47■□□□□ 0.07
SFXN3-207ENST00000489434 GLIS2Q9BZE0 524 aaPredicted RBP15.47■□□□□ 0.07
SFXN3-207ENST00000489434 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
SFXN3-207ENST00000489434 CA12O43570 354 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 TRIM28Q13263 835 aaKnown RBP15.46■□□□□ 0.07
SFXN3-207ENST00000489434 RIC3Q7Z5B4 369 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 SAPCD2Q86UD0 394 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 MICALL2Q8IY33 904 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 DPF2Q92785 391 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 HHIPL1Q96JK4 782 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 EYA3Q99504 573 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 CHMP4AQ9BY43 222 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 ZNF408Q9H9D4 720 aa15.46■□□□□ 0.07
SFXN3-207ENST00000489434 LRRC37AA6NMS7 1700 aa15.46■□□□□ 0.06
SFXN3-207ENST00000489434 YDJCA8MPS7 323 aa15.45■□□□□ 0.06
SFXN3-207ENST00000489434 IRS4O14654 1257 aaPredicted RBP15.45■□□□□ 0.06
SFXN3-207ENST00000489434 RTL5Q5HYW3 569 aaPredicted RBP15.45■□□□□ 0.06
SFXN3-207ENST00000489434 CELF1Q92879 486 aaKnown RBP15.45■□□□□ 0.06
SFXN3-207ENST00000489434 THSD7BQ9C0I4 1608 aa15.45■□□□□ 0.06
SFXN3-207ENST00000489434 DDX60Q8IY21 1712 aaKnown RBP15.45■□□□□ 0.06
SFXN3-207ENST00000489434 G3V3G9 751 aa15.44■□□□□ 0.06
SFXN3-207ENST00000489434 RIMBP2O15034 1052 aa15.44■□□□□ 0.06
SFXN3-207ENST00000489434 RPS12P25398 132 aaKnown RBP15.44■□□□□ 0.06
SFXN3-207ENST00000489434 RPS8P62241 208 aaKnown RBP15.44■□□□□ 0.06
SFXN3-207ENST00000489434 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
SFXN3-207ENST00000489434 TRPM4Q8TD43 1214 aa15.44■□□□□ 0.06
SFXN3-207ENST00000489434 ABHD8Q96I13 439 aa15.44■□□□□ 0.06
SFXN3-207ENST00000489434 DBNDD1Q9H9R9 158 aa15.44■□□□□ 0.06
SFXN3-207ENST00000489434 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
SFXN3-207ENST00000489434 PSMD14O00487 310 aa15.43■□□□□ 0.06
SFXN3-207ENST00000489434 AOC2O75106 756 aa15.43■□□□□ 0.06
SFXN3-207ENST00000489434 HIRAP54198 1017 aaPredicted RBP15.43■□□□□ 0.06
SFXN3-207ENST00000489434 GNAI1P63096 354 aa15.43■□□□□ 0.06
SFXN3-207ENST00000489434 GPSM2P81274 684 aa15.43■□□□□ 0.06
SFXN3-207ENST00000489434 ZC3H12CQ9C0D7 883 aaKnown RBP15.43■□□□□ 0.06
SFXN3-207ENST00000489434 DUOX1Q9NRD9 1551 aa15.43■□□□□ 0.06
SFXN3-207ENST00000489434 ECE2O60344 883 aa15.42■□□□□ 0.06
SFXN3-207ENST00000489434 BRPF1P55201 1214 aaPredicted RBP15.42■□□□□ 0.06
SFXN3-207ENST00000489434 KRT26Q7Z3Y9 468 aa15.42■□□□□ 0.06
SFXN3-207ENST00000489434 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
SFXN3-207ENST00000489434 ZBTB38Q8NAP3 1195 aaPredicted RBP15.42■□□□□ 0.06
SFXN3-207ENST00000489434 DCPSQ96C86 337 aaKnown RBP15.42■□□□□ 0.06
SFXN3-207ENST00000489434 IFT57Q9NWB7 429 aa15.42■□□□□ 0.06
SFXN3-207ENST00000489434 ANKIB1Q9P2G1 1089 aa15.42■□□□□ 0.06
SFXN3-207ENST00000489434 POLLQ9UGP5 575 aa15.42■□□□□ 0.06
SFXN3-207ENST00000489434 ZBTB12Q9Y330 459 aaPredicted RBP15.42■□□□□ 0.06
SFXN3-207ENST00000489434 DDX58O95786 925 aaKnown RBP15.41■□□□□ 0.06
SFXN3-207ENST00000489434 HUNKP57058 714 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms