RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 IQCA1LA6NCM1 817 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 TULP1O00294 542 aaPredicted RBP6.6□□□□□ -1.35
PRDM1-207ENST00000489365 C21orf2O43822 256 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 CAMTA2O94983 1202 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 NPR1P16066 1061 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 ALDH1B1P30837 517 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 FOSBP53539 338 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 WDR43Q15061 677 aaKnown RBP eCLIP6.6□□□□□ -1.35
PRDM1-207ENST00000489365 PRR5LQ6MZQ0 368 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 EPAS1Q99814 870 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 BCL2L12Q9HB09 334 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 RRAGCQ9HB90 399 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 PCDHGA10Q9Y5H3 936 aa6.6□□□□□ -1.35
PRDM1-207ENST00000489365 SCN7AQ01118 1682 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 GLTPD2A6NH11 291 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 RASSF7Q02833 373 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 NFE2L2Q16236 605 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 GRIPAP1Q4V328 841 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 CCDC93Q567U6 631 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 PRPF40BQ6NWY9 871 aaKnown RBP6.59□□□□□ -1.35
PRDM1-207ENST00000489365 RTKN2Q8IZC4 609 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 NGEFQ8N5V2 710 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 ZNF454Q8N9F8 522 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 RPGRQ92834 1020 aaKnown RBP6.59□□□□□ -1.35
PRDM1-207ENST00000489365 TSPYL4Q9UJ04 414 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 USP16Q9Y5T5 823 aa6.59□□□□□ -1.35
PRDM1-207ENST00000489365 KIAA1551Q9HCM1 1747 aa6.59□□□□□ -1.36
PRDM1-207ENST00000489365 TNRC6CQ9HCJ0 1690 aaKnown RBP6.58□□□□□ -1.36
PRDM1-207ENST00000489365 ERBB4Q15303 1308 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 AFDNP55196 1824 aaKnown RBP6.58□□□□□ -1.36
PRDM1-207ENST00000489365 FAM205CA6NFA0 338 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 FAM177BA6PVY3 158 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 ERVV-1B6SEH8 477 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 SRGNP10124 158 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 DCTN1Q14203 1278 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 TYW1BQ6NUM6 668 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 PPP1R42Q7Z4L9 355 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 RRP7AQ9Y3A4 280 aaKnown RBP6.58□□□□□ -1.36
PRDM1-207ENST00000489365 SIPA1L3O60292 1781 aaPredicted RBP6.58□□□□□ -1.36
PRDM1-207ENST00000489365 NRXN2Q9P2S2 1712 aa6.58□□□□□ -1.36
PRDM1-207ENST00000489365 DLEC1Q9Y238 1755 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 LTBP3Q9NS15 1303 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 KCNQ3O43525 872 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 MYL6BP14649 208 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 PIP4K2AP48426 406 aaPredicted RBP6.57□□□□□ -1.36
PRDM1-207ENST00000489365 RIPK4P57078 832 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 CALD1Q05682 793 aaKnown RBP6.57□□□□□ -1.36
PRDM1-207ENST00000489365 HSP90AB3PQ58FF7 597 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 RBM26Q5T8P6 1007 aaKnown RBP6.57□□□□□ -1.36
PRDM1-207ENST00000489365 CC2D2BQ6DHV5 1058 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 CCDC24Q8N4L8 307 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 JDP2Q8WYK2 163 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 CHMP4AQ9BY43 222 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 BABAM1Q9NWV8 329 aa6.57□□□□□ -1.36
PRDM1-207ENST00000489365 MAP3K15Q6ZN16 1313 aa6.56□□□□□ -1.36
PRDM1-207ENST00000489365 MYBBP1AQ9BQG0 1328 aaKnown RBP6.56□□□□□ -1.36
PRDM1-207ENST00000489365 NFKBIEO00221 500 aa6.56□□□□□ -1.36
PRDM1-207ENST00000489365 LMOD1P29536 600 aaPredicted RBP6.56□□□□□ -1.36
PRDM1-207ENST00000489365 FKBP4Q02790 459 aaKnown RBP eCLIP6.56□□□□□ -1.36
PRDM1-207ENST00000489365 PARP10Q53GL7 1025 aa6.56□□□□□ -1.36
PRDM1-207ENST00000489365 FBXW7Q969H0 707 aa6.56□□□□□ -1.36
PRDM1-207ENST00000489365 ZDHHC16Q969W1 377 aa6.56□□□□□ -1.36
PRDM1-207ENST00000489365 RBM17Q96I25 401 aaKnown RBP6.56□□□□□ -1.36
PRDM1-207ENST00000489365 MIS18AQ9NYP9 233 aa6.56□□□□□ -1.36
PRDM1-207ENST00000489365 BCORQ6W2J9 1755 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 PRAMEF22A3QJZ6 481 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 NBPF26B4DH59 902 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 HSP90B1P14625 803 aaKnown RBP6.55□□□□□ -1.36
PRDM1-207ENST00000489365 EIF2S2P20042 333 aaKnown RBP6.55□□□□□ -1.36
PRDM1-207ENST00000489365 EIF6P56537 245 aaKnown RBP6.55□□□□□ -1.36
PRDM1-207ENST00000489365 EIF4A1P60842 406 aaKnown RBP6.55□□□□□ -1.36
PRDM1-207ENST00000489365 PPP4R3BQ5MIZ7 849 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 NBPF10Q6P3W6 841 aaKnown RBP6.55□□□□□ -1.36
PRDM1-207ENST00000489365 PNMA8AQ86V59 439 aaPredicted RBP6.55□□□□□ -1.36
PRDM1-207ENST00000489365 NBPF15Q8N660 670 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 KLRG1Q96E93 195 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 NLRP3Q96P20 1036 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 ZBTB3Q9H5J0 574 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 LAS1LQ9Y4W2 734 aaKnown RBP6.55□□□□□ -1.36
PRDM1-207ENST00000489365 TIAM2Q8IVF5 1701 aa6.55□□□□□ -1.36
PRDM1-207ENST00000489365 IBTKQ9P2D0 1353 aaPredicted RBP6.55□□□□□ -1.36
PRDM1-207ENST00000489365 LAMB4A4D0S4 1761 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 RNF123Q5XPI4 1314 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 SBF1O95248 1867 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 POTEB3A0JP26 581 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 GPTP24298 496 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
PRDM1-207ENST00000489365 NEUROD2Q15784 382 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 VARS2Q5ST30 1063 aaKnown RBP6.54□□□□□ -1.36
PRDM1-207ENST00000489365 IFFO2Q5TF58 517 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 POTEBQ6S5H4 581 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 LDHDQ86WU2 507 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 SUPT20HQ8NEM7 779 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 RUNDC1Q96C34 613 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 PLEKHF1Q96S99 279 aa6.54□□□□□ -1.36
PRDM1-207ENST00000489365 THUMPD2Q9BTF0 503 aaKnown RBP6.54□□□□□ -1.36
PRDM1-207ENST00000489365 UTP14AQ9BVJ6 771 aaKnown RBP6.54□□□□□ -1.36
PRDM1-207ENST00000489365 ADAM33Q9BZ11 813 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms