RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 ATP6V1AP38606 617 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 EPHA10Q5JZY3 1008 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 KSR2Q6VAB6 950 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 TNNT1P13805 278 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
SMTN-218ENST00000489337 CCDC112Q8NEF3 446 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 ANAPC15P60006 121 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 NBPF14Q5TI25 921 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
SMTN-218ENST00000489337 NBPF15Q8N660 670 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
SMTN-218ENST00000489337 DDX21Q9NR30 783 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMTN-218ENST00000489337 DDX41Q9UJV9 622 aaKnown RBP13.91□□□□□ -0.18
SMTN-218ENST00000489337 AACSQ86V21 672 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 TMEM87AQ8NBN3 555 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 HELBQ8NG08 1087 aaPredicted RBP13.9□□□□□ -0.18
SMTN-218ENST00000489337 ZNF592Q92610 1267 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 DNAJC2Q99543 621 aaKnown RBP13.9□□□□□ -0.18
SMTN-218ENST00000489337 BOLA2Q9H3K6 86 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 ZBTB1Q9Y2K1 713 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 SMTNL1A8MU46 457 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 SLFN14P0C7P3 912 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 ZSCAN22P10073 491 aaPredicted RBP13.9□□□□□ -0.18
SMTN-218ENST00000489337 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 CAMTA1Q9Y6Y1 1673 aa13.9□□□□□ -0.18
SMTN-218ENST00000489337 MED1Q15648 1581 aaPredicted RBP13.9□□□□□ -0.18
SMTN-218ENST00000489337 SNAP23O00161 211 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 BEND3Q5T5X7 828 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 USP21Q9UK80 565 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 ATP6V1DQ9Y5K8 247 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 TOPAZ1Q8N9V7 1692 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMTN-218ENST00000489337 UNC5CLQ8IV45 518 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 SNRKQ9NRH2 765 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 ATP10DQ9P241 1426 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 LRMPQ12912 555 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 KIF24Q5T7B8 1368 aa13.89□□□□□ -0.19
SMTN-218ENST00000489337 ERICH4A6NGS2 130 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 GRM8O00222 908 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 STX6O43752 255 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 CHGBP05060 677 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
SMTN-218ENST00000489337 HYPKQ9NX55 129 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.88□□□□□ -0.19
SMTN-218ENST00000489337 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 KDM6AO15550 1401 aaPredicted RBP13.88□□□□□ -0.19
SMTN-218ENST00000489337 IGKV5-2P06315 115 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 FUCA2Q9BTY2 467 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 RGS12O14924 1447 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 NFAT5O94916 1531 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 CWC27Q6UX04 472 aaKnown RBP13.88□□□□□ -0.19
SMTN-218ENST00000489337 KRT222Q8N1A0 295 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
SMTN-218ENST00000489337 SYT1P21579 422 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 SYCP1Q15431 976 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 TERF2Q15554 542 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
SMTN-218ENST00000489337 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 IRX5P78411 483 aaPredicted RBP13.87□□□□□ -0.19
SMTN-218ENST00000489337 HLFQ16534 295 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 SLFNL1Q499Z3 407 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 HSP90AB3PQ58FF7 597 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 OSBPL3Q9H4L5 887 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 SMC3Q9UQE7 1217 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 PPFIA3O75145 1194 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 CHMLP26374 656 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 KIF18AQ8NI77 898 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 TIGD1Q96MW7 591 aa13.87□□□□□ -0.19
SMTN-218ENST00000489337 IQSEC3Q9UPP2 1182 aaPredicted RBP13.87□□□□□ -0.19
SMTN-218ENST00000489337 IPO4Q8TEX9 1081 aaKnown RBP13.86□□□□□ -0.19
SMTN-218ENST00000489337 TRIM5Q9C035 493 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 TLR7Q9NYK1 1049 aaKnown RBP13.86□□□□□ -0.19
SMTN-218ENST00000489337 MORC2Q9Y6X9 1032 aaPredicted RBP13.86□□□□□ -0.19
SMTN-218ENST00000489337 RPAP1Q9BWH6 1393 aaPredicted RBP13.86□□□□□ -0.19
SMTN-218ENST00000489337 F13A1P00488 732 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 PDIA6Q15084 440 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 GORABQ5T7V8 394 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 PAXBP1Q9Y5B6 917 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 ZNF142P52746 1687 aaPredicted RBP13.86□□□□□ -0.19
SMTN-218ENST00000489337 TIMM10P62072 90 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
SMTN-218ENST00000489337 LUZP1Q86V48 1076 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 FAM200AQ8TCP9 573 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 RHPN1Q8TCX5 695 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 ATG3Q9NT62 314 aa13.86□□□□□ -0.19
SMTN-218ENST00000489337 ADCY9O60503 1353 aa13.85□□□□□ -0.19
SMTN-218ENST00000489337 ATP8B2P98198 1209 aa13.85□□□□□ -0.19
SMTN-218ENST00000489337 MARCH10Q8NA82 808 aaPredicted RBP13.85□□□□□ -0.19
SMTN-218ENST00000489337 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
SMTN-218ENST00000489337 CAMK4Q16566 473 aa13.85□□□□□ -0.19
SMTN-218ENST00000489337 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMTN-218ENST00000489337 NRBP1Q9UHY1 535 aa13.85□□□□□ -0.19
SMTN-218ENST00000489337 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.85□□□□□ -0.19
SMTN-218ENST00000489337 V9GYY5 206 aaPredicted RBP13.85□□□□□ -0.19
SMTN-218ENST00000489337 TRMT112Q9UI30 125 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms