RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 VEGFAP15692 232 aaPredicted RBP30.63■■■□□ 2.49
PTPN18-213ENST00000489215 JDP2Q8WYK2 163 aa30.63■■■□□ 2.49
PTPN18-213ENST00000489215 ZNF428Q96B54 188 aa30.63■■■□□ 2.49
PTPN18-213ENST00000489215 RRAGCQ9HB90 399 aa30.63■■■□□ 2.49
PTPN18-213ENST00000489215 SNED1Q8TER0 1413 aa30.63■■■□□ 2.49
PTPN18-213ENST00000489215 DNAAF4Q8WXU2 420 aa30.62■■■□□ 2.49
PTPN18-213ENST00000489215 CDHR2Q9BYE9 1310 aa30.62■■■□□ 2.49
PTPN18-213ENST00000489215 IGKV5-2P06315 115 aa30.61■■■□□ 2.49
PTPN18-213ENST00000489215 NEURL1BA8MQ27 555 aa30.6■■■□□ 2.49
PTPN18-213ENST00000489215 SLFN5Q08AF3 891 aa30.6■■■□□ 2.49
PTPN18-213ENST00000489215 CCDC152Q4G0S7 254 aa30.6■■■□□ 2.49
PTPN18-213ENST00000489215 LINS1Q8NG48 757 aa30.59■■■□□ 2.49
PTPN18-213ENST00000489215 MPNDQ8N594 471 aa30.58■■■□□ 2.49
PTPN18-213ENST00000489215 RBM46Q8TBY0 533 aaKnown RBP30.58■■■□□ 2.49
PTPN18-213ENST00000489215 DPP8Q6V1X1 898 aaPredicted RBP30.57■■■□□ 2.48
PTPN18-213ENST00000489215 RTFDC1Q9BY42 306 aaPredicted RBP30.57■■■□□ 2.48
PTPN18-213ENST00000489215 WDR90Q96KV7 1748 aa30.56■■■□□ 2.48
PTPN18-213ENST00000489215 RPS8P62241 208 aaKnown RBP30.56■■■□□ 2.48
PTPN18-213ENST00000489215 CWF19L2Q2TBE0 894 aaKnown RBP30.56■■■□□ 2.48
PTPN18-213ENST00000489215 LARGE2Q8N3Y3 721 aa30.56■■■□□ 2.48
PTPN18-213ENST00000489215 FZD9O00144 591 aa30.55■■■□□ 2.48
PTPN18-213ENST00000489215 GCKRQ14397 625 aa30.55■■■□□ 2.48
PTPN18-213ENST00000489215 H7C1W4 665 aa30.54■■■□□ 2.48
PTPN18-213ENST00000489215 IQCA1LA6NCM1 817 aa30.53■■■□□ 2.48
PTPN18-213ENST00000489215 EIF6P56537 245 aaKnown RBP30.53■■■□□ 2.48
PTPN18-213ENST00000489215 FSTL1Q12841 308 aa30.53■■■□□ 2.48
PTPN18-213ENST00000489215 CELF1Q92879 486 aaKnown RBP30.53■■■□□ 2.48
PTPN18-213ENST00000489215 TAF1P21675 1872 aa30.53■■■□□ 2.48
PTPN18-213ENST00000489215 DDNO94850 711 aaPredicted RBP30.52■■■□□ 2.48
PTPN18-213ENST00000489215 MIER1Q8N108 512 aa30.52■■■□□ 2.48
PTPN18-213ENST00000489215 PPIP5K2O43314 1243 aa30.51■■■□□ 2.47
PTPN18-213ENST00000489215 CT47B1P0C2W7 299 aaPredicted RBP30.51■■■□□ 2.47
PTPN18-213ENST00000489215 NIM1KQ8IY84 436 aa30.51■■■□□ 2.47
PTPN18-213ENST00000489215 L3MBTL3Q96JM7 780 aaPredicted RBP30.51■■■□□ 2.47
PTPN18-213ENST00000489215 MYH3P11055 1940 aa30.5■■■□□ 2.47
PTPN18-213ENST00000489215 CTSWP56202 376 aa30.5■■■□□ 2.47
PTPN18-213ENST00000489215 UBE3BQ7Z3V4 1068 aa30.5■■■□□ 2.47
PTPN18-213ENST00000489215 TRMT2AQ8IZ69 625 aaKnown RBP30.5■■■□□ 2.47
PTPN18-213ENST00000489215 GPC2Q8N158 579 aa30.5■■■□□ 2.47
PTPN18-213ENST00000489215 JARID2Q92833 1246 aaPredicted RBP30.5■■■□□ 2.47
PTPN18-213ENST00000489215 HSPA6P17066 643 aa30.49■■■□□ 2.47
PTPN18-213ENST00000489215 SMC1BQ8NDV3 1235 aa30.49■■■□□ 2.47
PTPN18-213ENST00000489215 CDC5LQ99459 802 aaKnown RBP30.49■■■□□ 2.47
PTPN18-213ENST00000489215 PLA2G12BQ9BX93 195 aa30.49■■■□□ 2.47
PTPN18-213ENST00000489215 LRRC37AA6NMS7 1700 aa30.49■■■□□ 2.47
PTPN18-213ENST00000489215 ANKRD18AQ8IVF6 992 aa30.48■■■□□ 2.47
PTPN18-213ENST00000489215 TTLL11Q8NHH1 800 aa30.48■■■□□ 2.47
PTPN18-213ENST00000489215 NSFL1CQ9UNZ2 370 aaKnown RBP30.48■■■□□ 2.47
PTPN18-213ENST00000489215 SCN4AP35499 1836 aa30.47■■■□□ 2.47
PTPN18-213ENST00000489215 KIAA2012Q0VF49 1180 aa30.47■■■□□ 2.47
PTPN18-213ENST00000489215 ALDH1L2Q3SY69 923 aa30.47■■■□□ 2.47
PTPN18-213ENST00000489215 BEND3Q5T5X7 828 aa30.47■■■□□ 2.47
PTPN18-213ENST00000489215 CDCA7LQ96GN5 454 aa30.47■■■□□ 2.47
PTPN18-213ENST00000489215 PTPRCP08575 1304 aa30.47■■■□□ 2.47
PTPN18-213ENST00000489215 RTL9Q8NET4 1388 aa30.46■■■□□ 2.47
PTPN18-213ENST00000489215 POTECB2RU33 542 aa30.46■■■□□ 2.47
PTPN18-213ENST00000489215 F6X3S4 739 aa30.46■■■□□ 2.47
PTPN18-213ENST00000489215 AOC3Q16853 763 aa30.46■■■□□ 2.47
PTPN18-213ENST00000489215 SEC31BQ9NQW1 1179 aa30.46■■■□□ 2.47
PTPN18-213ENST00000489215 ALDH1L1O75891 902 aa30.45■■■□□ 2.47
PTPN18-213ENST00000489215 EYA3Q99504 573 aa30.45■■■□□ 2.47
PTPN18-213ENST00000489215 ZNRF3Q9ULT6 936 aa30.45■■■□□ 2.47
PTPN18-213ENST00000489215 ZNF541Q9H0D2 1346 aa30.45■■■□□ 2.46
PTPN18-213ENST00000489215 MRPL50Q8N5N7 158 aaKnown RBP30.44■■■□□ 2.46
PTPN18-213ENST00000489215 WASHC4Q2M389 1173 aa30.43■■■□□ 2.46
PTPN18-213ENST00000489215 SRCIN1Q9C0H9 1055 aa30.43■■■□□ 2.46
PTPN18-213ENST00000489215 PODXL2Q9NZ53 605 aa30.43■■■□□ 2.46
PTPN18-213ENST00000489215 CASP7P55210 303 aa30.42■■■□□ 2.46
PTPN18-213ENST00000489215 SLC4A10Q6U841 1118 aa30.42■■■□□ 2.46
PTPN18-213ENST00000489215 CCDC85AQ96PX6 553 aaPredicted RBP30.42■■■□□ 2.46
PTPN18-213ENST00000489215 HACL1Q9UJ83 578 aa30.42■■■□□ 2.46
PTPN18-213ENST00000489215 C6orf229H3BNL8 230 aa30.41■■■□□ 2.46
PTPN18-213ENST00000489215 SLC51AQ86UW1 340 aa30.41■■■□□ 2.46
PTPN18-213ENST00000489215 SSH1Q8WYL5 1049 aa30.41■■■□□ 2.46
PTPN18-213ENST00000489215 C9orf78Q9NZ63 289 aaPredicted RBP30.41■■■□□ 2.46
PTPN18-213ENST00000489215 ANKIB1Q9P2G1 1089 aa30.41■■■□□ 2.46
PTPN18-213ENST00000489215 CSF1RP07333 972 aa30.4■■■□□ 2.46
PTPN18-213ENST00000489215 APLP1P51693 650 aa30.4■■■□□ 2.46
PTPN18-213ENST00000489215 GPSM2P81274 684 aa30.4■■■□□ 2.46
PTPN18-213ENST00000489215 GREM2Q9H772 168 aa30.4■■■□□ 2.46
PTPN18-213ENST00000489215 BSDC1Q9NW68 430 aaPredicted RBP30.4■■■□□ 2.46
PTPN18-213ENST00000489215 GRM8O00222 908 aa30.39■■■□□ 2.46
PTPN18-213ENST00000489215 PNMA8AQ86V59 439 aaPredicted RBP30.39■■■□□ 2.46
PTPN18-213ENST00000489215 GJA3Q9Y6H8 435 aa30.39■■■□□ 2.46
PTPN18-213ENST00000489215 LMOD1P29536 600 aaPredicted RBP30.38■■■□□ 2.45
PTPN18-213ENST00000489215 IGHMBP2P38935 993 aaKnown RBP30.38■■■□□ 2.45
PTPN18-213ENST00000489215 TNIP1Q15025 636 aa30.38■■■□□ 2.45
PTPN18-213ENST00000489215 ZC3H12CQ9C0D7 883 aaKnown RBP30.38■■■□□ 2.45
PTPN18-213ENST00000489215 TAF1DQ9H5J8 278 aaPredicted RBP30.38■■■□□ 2.45
PTPN18-213ENST00000489215 COL4A5P29400 1685 aa30.38■■■□□ 2.45
PTPN18-213ENST00000489215 TBC1D16Q8TBP0 767 aa30.37■■■□□ 2.45
PTPN18-213ENST00000489215 POLLQ9UGP5 575 aa30.37■■■□□ 2.45
PTPN18-213ENST00000489215 GGA1Q9UJY5 639 aa30.37■■■□□ 2.45
PTPN18-213ENST00000489215 XDHP47989 1333 aa30.37■■■□□ 2.45
PTPN18-213ENST00000489215 SMC4Q9NTJ3 1288 aa30.36■■■□□ 2.45
PTPN18-213ENST00000489215 DUOX1Q9NRD9 1551 aa30.36■■■□□ 2.45
PTPN18-213ENST00000489215 ITGA6P23229 1130 aa30.35■■■□□ 2.45
PTPN18-213ENST00000489215 EPHX2P34913 555 aa30.35■■■□□ 2.45
PTPN18-213ENST00000489215 CIAPIN1Q6FI81 312 aa30.35■■■□□ 2.45
PTPN18-213ENST00000489215 ANKRD18BA2A2Z9 1011 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms