RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 FOXO4P98177 505 aa8.34□□□□□ -1.07
PTPRD-212ENST00000488774 C9orf131Q5VYM1 1079 aa8.34□□□□□ -1.07
PTPRD-212ENST00000488774 UBE3BQ7Z3V4 1068 aa8.34□□□□□ -1.07
PTPRD-212ENST00000488774 ZBTB38Q8NAP3 1195 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-212ENST00000488774 ZNF784Q8NCA9 323 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-212ENST00000488774 CCDC191Q8NCU4 936 aa8.34□□□□□ -1.07
PTPRD-212ENST00000488774 NYXQ9GZU5 481 aa8.34□□□□□ -1.07
PTPRD-212ENST00000488774 CWC25Q9NXE8 425 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-212ENST00000488774 ADAMTSL1Q8N6G6 1762 aa8.34□□□□□ -1.07
PTPRD-212ENST00000488774 SNAP23O00161 211 aa8.33□□□□□ -1.08
PTPRD-212ENST00000488774 NPHP1O15259 732 aa8.33□□□□□ -1.08
PTPRD-212ENST00000488774 NBPF7P0C2Y1 421 aaPredicted RBP8.33□□□□□ -1.08
PTPRD-212ENST00000488774 RLBP1P12271 317 aa8.33□□□□□ -1.08
PTPRD-212ENST00000488774 GTF2E1P29083 439 aaPredicted RBP8.33□□□□□ -1.08
PTPRD-212ENST00000488774 SF3B3Q15393 1217 aaKnown RBP8.33□□□□□ -1.08
PTPRD-212ENST00000488774 HSP90AB3PQ58FF7 597 aa8.33□□□□□ -1.08
PTPRD-212ENST00000488774 SUCLG2Q96I99 432 aa8.33□□□□□ -1.08
PTPRD-212ENST00000488774 GREM2Q9H772 168 aa8.33□□□□□ -1.08
PTPRD-212ENST00000488774 ZNF277Q9NRM2 450 aaPredicted RBP8.33□□□□□ -1.08
PTPRD-212ENST00000488774 SMC4Q9NTJ3 1288 aa8.33□□□□□ -1.08
PTPRD-212ENST00000488774 MYO5AQ9Y4I1 1855 aaKnown RBP8.33□□□□□ -1.08
PTPRD-212ENST00000488774 WDR90Q96KV7 1748 aa8.32□□□□□ -1.08
PTPRD-212ENST00000488774 POTECB2RU33 542 aa8.32□□□□□ -1.08
PTPRD-212ENST00000488774 GRIN3BO60391 1043 aa8.32□□□□□ -1.08
PTPRD-212ENST00000488774 SLC4A10Q6U841 1118 aa8.32□□□□□ -1.08
PTPRD-212ENST00000488774 LINS1Q8NG48 757 aa8.32□□□□□ -1.08
PTPRD-212ENST00000488774 TTLL11Q8NHH1 800 aa8.32□□□□□ -1.08
PTPRD-212ENST00000488774 ZNF526Q8TF50 670 aaPredicted RBP8.32□□□□□ -1.08
PTPRD-212ENST00000488774 CRAMP1Q96RY5 1269 aa8.32□□□□□ -1.08
PTPRD-212ENST00000488774 MYH13Q9UKX3 1938 aa8.32□□□□□ -1.08
PTPRD-212ENST00000488774 CDHR2Q9BYE9 1310 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 ZNF541Q9H0D2 1346 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-212ENST00000488774 DDX58O95786 925 aaKnown RBP8.31□□□□□ -1.08
PTPRD-212ENST00000488774 TRIM27P14373 513 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 CTSWP56202 376 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 GPSM2P81274 684 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 FAM161AQ3B820 660 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 ALDH1L2Q3SY69 923 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 ANKRD44Q8N8A2 993 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 RPGRQ92834 1020 aaKnown RBP8.31□□□□□ -1.08
PTPRD-212ENST00000488774 CNKSR1Q969H4 720 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 ZNF594Q96JF6 807 aaPredicted RBP8.31□□□□□ -1.08
PTPRD-212ENST00000488774 YTHDC1Q96MU7 727 aaKnown RBP8.31□□□□□ -1.08
PTPRD-212ENST00000488774 NLRP3Q96P20 1036 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 USP44Q9H0E7 712 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 KCNQ5Q9NR82 932 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 RNF181Q9P0P0 153 aa8.31□□□□□ -1.08
PTPRD-212ENST00000488774 UTYO14607 1347 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 RNF123Q5XPI4 1314 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 PLIN1O60240 522 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 PDE8AO60658 829 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 CSF1RP07333 972 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 KLRK1P26718 216 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-212ENST00000488774 GRAPQ13588 217 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 GRAPLQ8TC17 118 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-212ENST00000488774 CLUAP1Q96AJ1 413 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 RBM17Q96I25 401 aaKnown RBP8.3□□□□□ -1.08
PTPRD-212ENST00000488774 PLA2G12BQ9BX93 195 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 NMRK2Q9NPI5 230 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 POLLQ9UGP5 575 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 ATP6V0A2Q9Y487 856 aa8.3□□□□□ -1.08
PTPRD-212ENST00000488774 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.3□□□□□ -1.08
PTPRD-212ENST00000488774 ARAP2Q8WZ64 1704 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 SCN4AP35499 1836 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 SHTN1A0MZ66 631 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 YDJCA8MPS7 323 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 GRM8O00222 908 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 C20orf194Q5TEA3 1177 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 TXNRD3Q86VQ6 643 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 KLHDC4Q8TBB5 520 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 MEIS3Q99687 375 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 PUS3Q9BZE2 481 aaKnown RBP8.29□□□□□ -1.08
PTPRD-212ENST00000488774 BICC1Q9H694 974 aaKnown RBP8.29□□□□□ -1.08
PTPRD-212ENST00000488774 PTPRCP08575 1304 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 LTBP3Q9NS15 1303 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 IRS2Q9Y4H2 1338 aa8.29□□□□□ -1.08
PTPRD-212ENST00000488774 KIF3CO14782 793 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 POTEIP0CG38 1075 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 POTEJP0CG39 1038 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 LMNB1P20700 586 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 ALDH1B1P30837 517 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 FKBP4Q02790 459 aaKnown RBP eCLIP8.28□□□□□ -1.08
PTPRD-212ENST00000488774 AOC3Q16853 763 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 LMBR1LQ6UX01 489 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 SRCIN1Q9C0H9 1055 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 TAOK3Q9H2K8 898 aa8.28□□□□□ -1.08
PTPRD-212ENST00000488774 RTL9Q8NET4 1388 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 ALDH1L1O75891 902 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 DDNO94850 711 aaPredicted RBP8.27□□□□□ -1.09
PTPRD-212ENST00000488774 ITGA6P23229 1130 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 RFX5P48382 616 aaPredicted RBP8.27□□□□□ -1.09
PTPRD-212ENST00000488774 RPS8P62241 208 aaKnown RBP8.27□□□□□ -1.09
PTPRD-212ENST00000488774 NEXNQ0ZGT2 675 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 DDX46Q7L014 1031 aaKnown RBP8.27□□□□□ -1.09
PTPRD-212ENST00000488774 SP8Q8IXZ3 490 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 TMEM57Q8N5G2 664 aa8.27□□□□□ -1.09
PTPRD-212ENST00000488774 HELBQ8NG08 1087 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms