RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 MUM1L1Q5H9M0 696 aa18.92■□□□□ 0.62
MCF2L-229ENST00000488765 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-229ENST00000488765 LEO1Q8WVC0 666 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-229ENST00000488765 AK7Q96M32 723 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 ACEP12821 1306 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 A0A1B0GUL7 405 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 HSP90AA4PQ58FG1 418 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 SRRTQ9BXP5 876 aaKnown RBP18.91■□□□□ 0.62
MCF2L-229ENST00000488765 CLSTN2Q9H4D0 955 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 DEF6Q9H4E7 631 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 PTCH1Q13635 1447 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 PATL2C9JE40 543 aaKnown RBP18.91■□□□□ 0.62
MCF2L-229ENST00000488765 FANCGO15287 622 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 PTH1RQ03431 593 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 IQCB1Q15051 598 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 LEKR1Q6ZMV7 388 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 CNPY4Q8N129 248 aa18.91■□□□□ 0.62
MCF2L-229ENST00000488765 PTPRMP28827 1452 aa18.9■□□□□ 0.62
MCF2L-229ENST00000488765 EIF3CLB5ME19 914 aaKnown RBP18.9■□□□□ 0.62
MCF2L-229ENST00000488765 BRPF1P55201 1214 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-229ENST00000488765 TSGA10IPQ3SY00 556 aa18.9■□□□□ 0.62
MCF2L-229ENST00000488765 EIF3CQ99613 913 aaKnown RBP18.9■□□□□ 0.62
MCF2L-229ENST00000488765 TPCN1Q9ULQ1 816 aa18.9■□□□□ 0.62
MCF2L-229ENST00000488765 YY1AP1Q9H869 796 aa18.89■□□□□ 0.62
MCF2L-229ENST00000488765 RICTORQ6R327 1708 aa18.89■□□□□ 0.61
MCF2L-229ENST00000488765 PDE11AQ9HCR9 933 aa18.89■□□□□ 0.61
MCF2L-229ENST00000488765 IFNKQ9P0W0 207 aa18.89■□□□□ 0.61
MCF2L-229ENST00000488765 KIAA1210Q9ULL0 1709 aa18.89■□□□□ 0.61
MCF2L-229ENST00000488765 A2ML1A8K2U0 1454 aa18.89■□□□□ 0.61
MCF2L-229ENST00000488765 TNRQ92752 1358 aa18.89■□□□□ 0.61
MCF2L-229ENST00000488765 PIK3R4Q99570 1358 aa18.89■□□□□ 0.61
MCF2L-229ENST00000488765 ARMCX5Q6P1M9 558 aa18.89■□□□□ 0.61
MCF2L-229ENST00000488765 FOXO3O43524 673 aa18.88■□□□□ 0.61
MCF2L-229ENST00000488765 CC2D1AQ6P1N0 951 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-229ENST00000488765 GOLGA5Q8TBA6 731 aa18.88■□□□□ 0.61
MCF2L-229ENST00000488765 ALKQ9UM73 1620 aa18.88■□□□□ 0.61
MCF2L-229ENST00000488765 ACTN2P35609 894 aa18.88■□□□□ 0.61
MCF2L-229ENST00000488765 DHX8Q14562 1220 aaKnown RBP18.88■□□□□ 0.61
MCF2L-229ENST00000488765 L2HGDHQ9H9P8 463 aa18.88■□□□□ 0.61
MCF2L-229ENST00000488765 SETBP1Q9Y6X0 1596 aa18.88■□□□□ 0.61
MCF2L-229ENST00000488765 KNDC1Q76NI1 1749 aa18.87■□□□□ 0.61
MCF2L-229ENST00000488765 CCDC93Q567U6 631 aa18.87■□□□□ 0.61
MCF2L-229ENST00000488765 UTP14AQ9BVJ6 771 aaKnown RBP18.87■□□□□ 0.61
MCF2L-229ENST00000488765 XPO4Q9C0E2 1151 aaKnown RBP18.87■□□□□ 0.61
MCF2L-229ENST00000488765 SFPQP23246 707 aaKnown RBP eCLIP18.87■□□□□ 0.61
MCF2L-229ENST00000488765 PARD6BQ9BYG5 372 aa18.87■□□□□ 0.61
MCF2L-229ENST00000488765 ARFGAP3Q9NP61 516 aa18.87■□□□□ 0.61
MCF2L-229ENST00000488765 IFT172Q9UG01 1749 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 JAK2O60674 1132 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 AMPHP49418 695 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 RNF20Q5VTR2 975 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 NBPF6Q5VWK0 638 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 MICALL1Q8N3F8 863 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 NBPF4Q96M43 638 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 OSBPL3Q9H4L5 887 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 ROBO2Q9HCK4 1378 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 DDX19AQ9NUU7 478 aaKnown RBP18.86■□□□□ 0.61
MCF2L-229ENST00000488765 ARHGEF40Q8TER5 1519 aa18.86■□□□□ 0.61
MCF2L-229ENST00000488765 NLRP6P59044 892 aa18.85■□□□□ 0.61
MCF2L-229ENST00000488765 NBPF11Q86T75 865 aa18.85■□□□□ 0.61
MCF2L-229ENST00000488765 PUS7Q96PZ0 661 aaKnown RBP18.85■□□□□ 0.61
MCF2L-229ENST00000488765 NOM1Q5C9Z4 860 aaKnown RBP18.85■□□□□ 0.61
MCF2L-229ENST00000488765 SIL1Q9H173 461 aa18.85■□□□□ 0.61
MCF2L-229ENST00000488765 TFRCP02786 760 aaKnown RBP18.85■□□□□ 0.61
MCF2L-229ENST00000488765 CREBRFQ8IUR6 639 aa18.85■□□□□ 0.61
MCF2L-229ENST00000488765 DHX40Q8IX18 779 aaKnown RBP18.85■□□□□ 0.61
MCF2L-229ENST00000488765 CYP46A1Q9Y6A2 500 aa18.85■□□□□ 0.61
MCF2L-229ENST00000488765 SURF6O75683 361 aaKnown RBP18.84■□□□□ 0.61
MCF2L-229ENST00000488765 MMP14P50281 582 aa18.84■□□□□ 0.61
MCF2L-229ENST00000488765 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
MCF2L-229ENST00000488765 FAN1Q9Y2M0 1017 aa18.84■□□□□ 0.61
MCF2L-229ENST00000488765 TAF6LQ9Y6J9 622 aa18.84■□□□□ 0.61
MCF2L-229ENST00000488765 NSD2O96028 1365 aa18.84■□□□□ 0.61
MCF2L-229ENST00000488765 CLTCQ00610 1675 aaKnown RBP18.84■□□□□ 0.61
MCF2L-229ENST00000488765 GNAI2P04899 355 aa18.84■□□□□ 0.61
MCF2L-229ENST00000488765 LMOD1P29536 600 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-229ENST00000488765 IL13P35225 146 aa18.84■□□□□ 0.61
MCF2L-229ENST00000488765 ETF1P62495 437 aaKnown RBP18.84■□□□□ 0.61
MCF2L-229ENST00000488765 MRFAP1L1Q96HT8 127 aa18.84■□□□□ 0.61
MCF2L-229ENST00000488765 LSG1Q9H089 658 aaKnown RBP18.84■□□□□ 0.61
MCF2L-229ENST00000488765 SGSM2O43147 1006 aa18.83■□□□□ 0.61
MCF2L-229ENST00000488765 RAB11FIP3O75154 756 aa18.83■□□□□ 0.61
MCF2L-229ENST00000488765 ATP2B1P20020 1258 aa18.83■□□□□ 0.61
MCF2L-229ENST00000488765 PUF60Q9UHX1 559 aaKnown RBP18.83■□□□□ 0.61
MCF2L-229ENST00000488765 TADA3O75528 432 aa18.83■□□□□ 0.61
MCF2L-229ENST00000488765 CCDC102AQ96A19 550 aa18.83■□□□□ 0.61
MCF2L-229ENST00000488765 NPHP3Q7Z494 1330 aa18.83■□□□□ 0.6
MCF2L-229ENST00000488765 NEMFO60524 1076 aa18.83■□□□□ 0.6
MCF2L-229ENST00000488765 CCAR1Q8IX12 1150 aaKnown RBP18.83■□□□□ 0.6
MCF2L-229ENST00000488765 USHBP1Q8N6Y0 703 aa18.83■□□□□ 0.6
MCF2L-229ENST00000488765 TMEM131LA2VDJ0 1609 aa18.83■□□□□ 0.6
MCF2L-229ENST00000488765 PREX1Q8TCU6 1659 aa18.82■□□□□ 0.6
MCF2L-229ENST00000488765 CD163L1Q9NR16 1453 aa18.82■□□□□ 0.6
MCF2L-229ENST00000488765 CLGNO14967 610 aa18.82■□□□□ 0.6
MCF2L-229ENST00000488765 ECM2O94769 699 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-229ENST00000488765 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-229ENST00000488765 SCAND2PQ9GZW5 306 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-229ENST00000488765 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
MCF2L-229ENST00000488765 MNAT1P51948 309 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms