RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 GMPSP49915 693 aaPredicted RBP24.94■■□□□ 1.58
GGPS1-206ENST00000488594 AIMP1Q12904 312 aaKnown RBP24.94■■□□□ 1.58
GGPS1-206ENST00000488594 TNIP1Q15025 636 aa24.94■■□□□ 1.58
GGPS1-206ENST00000488594 RALBP1Q15311 655 aa24.94■■□□□ 1.58
GGPS1-206ENST00000488594 CIAPIN1Q6FI81 312 aa24.94■■□□□ 1.58
GGPS1-206ENST00000488594 TMC4Q7Z404 712 aa24.94■■□□□ 1.58
GGPS1-206ENST00000488594 GRAPQ13588 217 aa24.93■■□□□ 1.58
GGPS1-206ENST00000488594 CYP4F22Q6NT55 531 aa24.93■■□□□ 1.58
GGPS1-206ENST00000488594 GRAPLQ8TC17 118 aaPredicted RBP24.93■■□□□ 1.58
GGPS1-206ENST00000488594 ZC3H15Q8WU90 426 aaKnown RBP24.93■■□□□ 1.58
GGPS1-206ENST00000488594 MAP2K2P36507 400 aa24.93■■□□□ 1.58
GGPS1-206ENST00000488594 PGAP2Q9UHJ9 254 aa24.93■■□□□ 1.58
GGPS1-206ENST00000488594 GRM1Q13255 1194 aa24.92■■□□□ 1.58
GGPS1-206ENST00000488594 NECTIN2Q92692 538 aa24.92■■□□□ 1.58
GGPS1-206ENST00000488594 ABHD8Q96I13 439 aa24.92■■□□□ 1.58
GGPS1-206ENST00000488594 BCL2L13Q9BXK5 485 aa24.92■■□□□ 1.58
GGPS1-206ENST00000488594 SAPCD2Q86UD0 394 aa24.91■■□□□ 1.58
GGPS1-206ENST00000488594 HHIPL1Q96JK4 782 aa24.91■■□□□ 1.58
GGPS1-206ENST00000488594 ANKRD36CQ5JPF3 1778 aa24.9■■□□□ 1.58
GGPS1-206ENST00000488594 CHL1O00533 1208 aa24.9■■□□□ 1.58
GGPS1-206ENST00000488594 CELF2O95319 508 aaKnown RBP24.9■■□□□ 1.58
GGPS1-206ENST00000488594 TRPM7Q96QT4 1865 aa24.89■■□□□ 1.58
GGPS1-206ENST00000488594 RAD17O75943 681 aa24.89■■□□□ 1.57
GGPS1-206ENST00000488594 GLIS2Q9BZE0 524 aaPredicted RBP24.88■■□□□ 1.57
GGPS1-206ENST00000488594 CA12O43570 354 aa24.87■■□□□ 1.57
GGPS1-206ENST00000488594 HOXB7P09629 217 aa24.87■■□□□ 1.57
GGPS1-206ENST00000488594 CDC37L1Q7L3B6 337 aa24.87■■□□□ 1.57
GGPS1-206ENST00000488594 PLBD2Q8NHP8 589 aa24.87■■□□□ 1.57
GGPS1-206ENST00000488594 H7C1D1 291 aa24.86■■□□□ 1.57
GGPS1-206ENST00000488594 CHPF2Q9P2E5 772 aa24.86■■□□□ 1.57
GGPS1-206ENST00000488594 CNOT7Q9UIV1 285 aaKnown RBP24.86■■□□□ 1.57
GGPS1-206ENST00000488594 LAMB2P55268 1798 aa24.86■■□□□ 1.57
GGPS1-206ENST00000488594 YDJCA8MPS7 323 aa24.84■■□□□ 1.57
GGPS1-206ENST00000488594 HIRAP54198 1017 aaPredicted RBP24.84■■□□□ 1.57
GGPS1-206ENST00000488594 NEUROD2Q15784 382 aa24.84■■□□□ 1.57
GGPS1-206ENST00000488594 KRT24Q2M2I5 525 aa24.84■■□□□ 1.57
GGPS1-206ENST00000488594 HDGFL1Q5TGJ6 251 aa24.84■■□□□ 1.57
GGPS1-206ENST00000488594 ANKRD13DQ6ZTN6 518 aa24.84■■□□□ 1.57
GGPS1-206ENST00000488594 DBF4Q9UBU7 674 aaPredicted RBP24.84■■□□□ 1.57
GGPS1-206ENST00000488594 AOC2O75106 756 aa24.83■■□□□ 1.57
GGPS1-206ENST00000488594 SF3B3Q15393 1217 aaKnown RBP24.83■■□□□ 1.57
GGPS1-206ENST00000488594 WASHC4Q2M389 1173 aa24.83■■□□□ 1.57
GGPS1-206ENST00000488594 TRPM4Q8TD43 1214 aa24.83■■□□□ 1.57
GGPS1-206ENST00000488594 DPF2Q92785 391 aa24.83■■□□□ 1.57
GGPS1-206ENST00000488594 LAS1LQ9Y4W2 734 aaKnown RBP24.83■■□□□ 1.57
GGPS1-206ENST00000488594 DUOX1Q9NRD9 1551 aa24.82■■□□□ 1.56
GGPS1-206ENST00000488594 BRPF1P55201 1214 aaPredicted RBP24.82■■□□□ 1.56
GGPS1-206ENST00000488594 MICALL2Q8IY33 904 aa24.82■■□□□ 1.56
GGPS1-206ENST00000488594 CCDC146Q8IYE0 955 aa24.82■■□□□ 1.56
GGPS1-206ENST00000488594 RUNDC1Q96C34 613 aa24.82■■□□□ 1.56
GGPS1-206ENST00000488594 ISCA1Q9BUE6 129 aa24.82■■□□□ 1.56
GGPS1-206ENST00000488594 ZNF408Q9H9D4 720 aa24.82■■□□□ 1.56
GGPS1-206ENST00000488594 NSFL1CQ9UNZ2 370 aaKnown RBP24.82■■□□□ 1.56
GGPS1-206ENST00000488594 MYBBP1AQ9BQG0 1328 aaKnown RBP24.81■■□□□ 1.56
GGPS1-206ENST00000488594 TRIM35Q9UPQ4 493 aa24.81■■□□□ 1.56
GGPS1-206ENST00000488594 LRRC37AA6NMS7 1700 aa24.81■■□□□ 1.56
GGPS1-206ENST00000488594 FAM89AQ96GI7 184 aa24.8■■□□□ 1.56
GGPS1-206ENST00000488594 HYPKQ9NX55 129 aa24.8■■□□□ 1.56
GGPS1-206ENST00000488594 CELF1Q92879 486 aaKnown RBP24.8■■□□□ 1.56
GGPS1-206ENST00000488594 RPS12P25398 132 aaKnown RBP24.79■■□□□ 1.56
GGPS1-206ENST00000488594 NOGQ13253 232 aa24.79■■□□□ 1.56
GGPS1-206ENST00000488594 TRIM28Q13263 835 aaKnown RBP24.79■■□□□ 1.56
GGPS1-206ENST00000488594 WDR43Q15061 677 aaKnown RBP eCLIP24.79■■□□□ 1.56
GGPS1-206ENST00000488594 EYA3Q99504 573 aa24.79■■□□□ 1.56
GGPS1-206ENST00000488594 ZBTB12Q9Y330 459 aaPredicted RBP24.79■■□□□ 1.56
GGPS1-206ENST00000488594 SHTN1A0MZ66 631 aa24.78■■□□□ 1.56
GGPS1-206ENST00000488594 ATP5J2-PTCD1G3V325 749 aa24.78■■□□□ 1.56
GGPS1-206ENST00000488594 C6orf229H3BNL8 230 aa24.78■■□□□ 1.56
GGPS1-206ENST00000488594 PSMD14O00487 310 aa24.78■■□□□ 1.56
GGPS1-206ENST00000488594 DBNDD1Q9H9R9 158 aa24.78■■□□□ 1.56
GGPS1-206ENST00000488594 TSKSQ9UJT2 592 aa24.78■■□□□ 1.56
GGPS1-206ENST00000488594 USP48Q86UV5 1035 aa24.77■■□□□ 1.56
GGPS1-206ENST00000488594 ZNF428Q96B54 188 aa24.77■■□□□ 1.56
GGPS1-206ENST00000488594 CFAP44Q96MT7 982 aa24.77■■□□□ 1.56
GGPS1-206ENST00000488594 POLLQ9UGP5 575 aa24.77■■□□□ 1.56
GGPS1-206ENST00000488594 CCDC85CA6NKD9 419 aa24.76■■□□□ 1.55
GGPS1-206ENST00000488594 HSP90B1P14625 803 aaKnown RBP24.76■■□□□ 1.55
GGPS1-206ENST00000488594 GPSM2P81274 684 aa24.76■■□□□ 1.55
GGPS1-206ENST00000488594 DDX60Q8IY21 1712 aaKnown RBP24.76■■□□□ 1.55
GGPS1-206ENST00000488594 IRS4O14654 1257 aaPredicted RBP24.75■■□□□ 1.55
GGPS1-206ENST00000488594 RIMBP2O15034 1052 aa24.75■■□□□ 1.55
GGPS1-206ENST00000488594 HUNKP57058 714 aa24.75■■□□□ 1.55
GGPS1-206ENST00000488594 RPS8P62241 208 aaKnown RBP24.75■■□□□ 1.55
GGPS1-206ENST00000488594 DUSP27Q5VZP5 1158 aa24.75■■□□□ 1.55
GGPS1-206ENST00000488594 SAMD7Q7Z3H4 446 aa24.75■■□□□ 1.55
GGPS1-206ENST00000488594 KRT26Q7Z3Y9 468 aa24.75■■□□□ 1.55
GGPS1-206ENST00000488594 ECE2O60344 883 aa24.74■■□□□ 1.55
GGPS1-206ENST00000488594 FAM161AQ3B820 660 aa24.74■■□□□ 1.55
GGPS1-206ENST00000488594 TAF1P21675 1872 aa24.74■■□□□ 1.55
GGPS1-206ENST00000488594 TBC1D10BQ4KMP7 808 aaPredicted RBP24.73■■□□□ 1.55
GGPS1-206ENST00000488594 TBC1D16Q8TBP0 767 aa24.73■■□□□ 1.55
GGPS1-206ENST00000488594 DCPSQ96C86 337 aaKnown RBP24.73■■□□□ 1.55
GGPS1-206ENST00000488594 GOLGA2Q08379 1002 aa24.72■■□□□ 1.55
GGPS1-206ENST00000488594 RTL5Q5HYW3 569 aaPredicted RBP24.72■■□□□ 1.55
GGPS1-206ENST00000488594 ZBTB38Q8NAP3 1195 aaPredicted RBP24.72■■□□□ 1.55
GGPS1-206ENST00000488594 RGS19P49795 217 aa24.71■■□□□ 1.55
GGPS1-206ENST00000488594 RIC3Q7Z5B4 369 aa24.71■■□□□ 1.55
GGPS1-206ENST00000488594 ZC3H12CQ9C0D7 883 aaKnown RBP24.71■■□□□ 1.55
GGPS1-206ENST00000488594 PODXL2Q9NZ53 605 aa24.71■■□□□ 1.55
GGPS1-206ENST00000488594 ADAMTS8Q9UP79 889 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms