RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
TTC3-221ENST00000488522 TRAF5O00463 557 aa16.1■□□□□ 0.17
TTC3-221ENST00000488522 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
TTC3-221ENST00000488522 ZC3H15Q8WU90 426 aaKnown RBP16.1■□□□□ 0.17
TTC3-221ENST00000488522 MAP2K2P36507 400 aa16.09■□□□□ 0.17
TTC3-221ENST00000488522 TMPOP42166 694 aaKnown RBP16.09■□□□□ 0.17
TTC3-221ENST00000488522 RIPK4P57078 832 aa16.09■□□□□ 0.17
TTC3-221ENST00000488522 TCIRG1Q13488 830 aa16.09■□□□□ 0.17
TTC3-221ENST00000488522 GRAPQ13588 217 aa16.09■□□□□ 0.17
TTC3-221ENST00000488522 DPP8Q6V1X1 898 aaPredicted RBP16.09■□□□□ 0.17
TTC3-221ENST00000488522 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
TTC3-221ENST00000488522 SAPCD2Q86UD0 394 aa16.09■□□□□ 0.17
TTC3-221ENST00000488522 MPNDQ8N594 471 aa16.09■□□□□ 0.17
TTC3-221ENST00000488522 GRAPLQ8TC17 118 aaPredicted RBP16.09■□□□□ 0.17
TTC3-221ENST00000488522 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
TTC3-221ENST00000488522 ANXA1P04083 346 aa16.08■□□□□ 0.16
TTC3-221ENST00000488522 EIF2S2P20042 333 aaKnown RBP16.08■□□□□ 0.16
TTC3-221ENST00000488522 GMPSP49915 693 aaPredicted RBP16.08■□□□□ 0.16
TTC3-221ENST00000488522 CIAPIN1Q6FI81 312 aa16.08■□□□□ 0.16
TTC3-221ENST00000488522 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.16
TTC3-221ENST00000488522 COPS6Q7L5N1 327 aa16.08■□□□□ 0.16
TTC3-221ENST00000488522 ABHD8Q96I13 439 aa16.08■□□□□ 0.16
TTC3-221ENST00000488522 GPR101Q96P66 508 aaPredicted RBP16.08■□□□□ 0.16
TTC3-221ENST00000488522 SH3TC1Q8TE82 1336 aa16.08■□□□□ 0.16
TTC3-221ENST00000488522 CHL1O00533 1208 aa16.07■□□□□ 0.16
TTC3-221ENST00000488522 RALBP1Q15311 655 aa16.07■□□□□ 0.16
TTC3-221ENST00000488522 DDX46Q7L014 1031 aaKnown RBP16.07■□□□□ 0.16
TTC3-221ENST00000488522 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
TTC3-221ENST00000488522 TAF1P21675 1872 aa16.07■□□□□ 0.16
TTC3-221ENST00000488522 CA12O43570 354 aa16.06■□□□□ 0.16
TTC3-221ENST00000488522 HOXB7P09629 217 aa16.06■□□□□ 0.16
TTC3-221ENST00000488522 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
TTC3-221ENST00000488522 TNIP1Q15025 636 aa16.06■□□□□ 0.16
TTC3-221ENST00000488522 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
TTC3-221ENST00000488522 HIRAP54198 1017 aaPredicted RBP16.05■□□□□ 0.16
TTC3-221ENST00000488522 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
TTC3-221ENST00000488522 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
TTC3-221ENST00000488522 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
TTC3-221ENST00000488522 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
TTC3-221ENST00000488522 TRPM4Q8TD43 1214 aa16.04■□□□□ 0.16
TTC3-221ENST00000488522 DPF2Q92785 391 aa16.04■□□□□ 0.16
TTC3-221ENST00000488522 ISCA1Q9BUE6 129 aa16.04■□□□□ 0.16
TTC3-221ENST00000488522 BEGAINQ9BUH8 593 aa16.04■□□□□ 0.16
TTC3-221ENST00000488522 GLIS2Q9BZE0 524 aaPredicted RBP16.04■□□□□ 0.16
TTC3-221ENST00000488522 COL4A1P02462 1669 aa16.03■□□□□ 0.16
TTC3-221ENST00000488522 RAD17O75943 681 aa16.03■□□□□ 0.16
TTC3-221ENST00000488522 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
TTC3-221ENST00000488522 CDC37L1Q7L3B6 337 aa16.03■□□□□ 0.16
TTC3-221ENST00000488522 PLBD2Q8NHP8 589 aa16.03■□□□□ 0.16
TTC3-221ENST00000488522 ZNF609O15014 1411 aa16.02■□□□□ 0.16
TTC3-221ENST00000488522 AOC2O75106 756 aa16.02■□□□□ 0.16
TTC3-221ENST00000488522 RGS19P49795 217 aa16.02■□□□□ 0.16
TTC3-221ENST00000488522 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.16
TTC3-221ENST00000488522 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.16
TTC3-221ENST00000488522 CHPF2Q9P2E5 772 aa16.02■□□□□ 0.16
TTC3-221ENST00000488522 CNOT7Q9UIV1 285 aaKnown RBP16.02■□□□□ 0.16
TTC3-221ENST00000488522 TRIM35Q9UPQ4 493 aa16.02■□□□□ 0.16
TTC3-221ENST00000488522 KRT24Q2M2I5 525 aa16.01■□□□□ 0.15
TTC3-221ENST00000488522 BCL2L13Q9BXK5 485 aa16.01■□□□□ 0.15
TTC3-221ENST00000488522 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
TTC3-221ENST00000488522 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
TTC3-221ENST00000488522 HDGFL1Q5TGJ6 251 aa16■□□□□ 0.15
TTC3-221ENST00000488522 MICALL2Q8IY33 904 aa16■□□□□ 0.15
TTC3-221ENST00000488522 NECTIN2Q92692 538 aa16■□□□□ 0.15
TTC3-221ENST00000488522 DBF4Q9UBU7 674 aaPredicted RBP16■□□□□ 0.15
TTC3-221ENST00000488522 PSME4Q14997 1843 aa15.99■□□□□ 0.15
TTC3-221ENST00000488522 SHTN1A0MZ66 631 aa15.99■□□□□ 0.15
TTC3-221ENST00000488522 H7C1D1 291 aa15.99■□□□□ 0.15
TTC3-221ENST00000488522 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
TTC3-221ENST00000488522 NOGQ13253 232 aa15.99■□□□□ 0.15
TTC3-221ENST00000488522 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
TTC3-221ENST00000488522 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
TTC3-221ENST00000488522 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
TTC3-221ENST00000488522 RUNDC1Q96C34 613 aa15.99■□□□□ 0.15
TTC3-221ENST00000488522 SCN9AQ15858 1988 aa15.98■□□□□ 0.15
TTC3-221ENST00000488522 PSMD14O00487 310 aa15.98■□□□□ 0.15
TTC3-221ENST00000488522 GRM1Q13255 1194 aa15.98■□□□□ 0.15
TTC3-221ENST00000488522 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
TTC3-221ENST00000488522 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
TTC3-221ENST00000488522 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
TTC3-221ENST00000488522 RTL9Q8NET4 1388 aa15.98■□□□□ 0.15
TTC3-221ENST00000488522 CASP8AP2Q9UKL3 1982 aa15.97■□□□□ 0.15
TTC3-221ENST00000488522 CFAP44Q96MT7 982 aa15.97■□□□□ 0.15
TTC3-221ENST00000488522 POLLQ9UGP5 575 aa15.97■□□□□ 0.15
TTC3-221ENST00000488522 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
TTC3-221ENST00000488522 POLR2AP24928 1970 aaKnown RBP15.96■□□□□ 0.15
TTC3-221ENST00000488522 GPSM2P81274 684 aa15.96■□□□□ 0.15
TTC3-221ENST00000488522 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
TTC3-221ENST00000488522 EYA3Q99504 573 aa15.96■□□□□ 0.15
TTC3-221ENST00000488522 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
TTC3-221ENST00000488522 FAM155AB1AL88 458 aaPredicted RBP15.95■□□□□ 0.14
TTC3-221ENST00000488522 ECE2O60344 883 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 SLC34A2O95436 690 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 EGFRP00533 1210 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 ZNF853P0CG23 659 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 HUNKP57058 714 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 SAMD7Q7Z3H4 446 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 USP48Q86UV5 1035 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 CCDC146Q8IYE0 955 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 TBC1D16Q8TBP0 767 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms