RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 CIAO1O76071 339 aa24.64■■□□□ 1.54
NECAB3-213ENST00000488489 IL25Q9H293 177 aa24.64■■□□□ 1.54
NECAB3-213ENST00000488489 GREM2Q9H772 168 aa24.64■■□□□ 1.54
NECAB3-213ENST00000488489 NIP7Q9Y221 180 aaKnown RBP eCLIP24.64■■□□□ 1.54
NECAB3-213ENST00000488489 IFIT5Q13325 482 aaKnown RBP24.64■■□□□ 1.53
NECAB3-213ENST00000488489 TBC1D2Q9BYX2 928 aa24.64■■□□□ 1.53
NECAB3-213ENST00000488489 BCL11BQ9C0K0 894 aaPredicted RBP24.64■■□□□ 1.53
NECAB3-213ENST00000488489 PDE8AO60658 829 aa24.63■■□□□ 1.53
NECAB3-213ENST00000488489 REC8O95072 547 aa24.63■■□□□ 1.53
NECAB3-213ENST00000488489 BCORQ6W2J9 1755 aa24.63■■□□□ 1.53
NECAB3-213ENST00000488489 AMIGO3Q86WK7 504 aa24.62■■□□□ 1.53
NECAB3-213ENST00000488489 DBNDD2Q9BQY9 259 aa24.62■■□□□ 1.53
NECAB3-213ENST00000488489 UTP14AQ9BVJ6 771 aaKnown RBP24.62■■□□□ 1.53
NECAB3-213ENST00000488489 BOLA2Q9H3K6 86 aa24.62■■□□□ 1.53
NECAB3-213ENST00000488489 SH3TC1Q8TE82 1336 aa24.62■■□□□ 1.53
NECAB3-213ENST00000488489 RPS6KA4O75676 772 aa24.62■■□□□ 1.53
NECAB3-213ENST00000488489 ITGA6P23229 1130 aa24.62■■□□□ 1.53
NECAB3-213ENST00000488489 PARP10Q53GL7 1025 aa24.62■■□□□ 1.53
NECAB3-213ENST00000488489 KRT27Q7Z3Y8 459 aa24.62■■□□□ 1.53
NECAB3-213ENST00000488489 BECN1Q14457 450 aa24.61■■□□□ 1.53
NECAB3-213ENST00000488489 CLEC4GQ6UXB4 293 aa24.61■■□□□ 1.53
NECAB3-213ENST00000488489 TAF1LQ8IZX4 1826 aa24.61■■□□□ 1.53
NECAB3-213ENST00000488489 HCLS1P14317 486 aaPredicted RBP24.61■■□□□ 1.53
NECAB3-213ENST00000488489 GSE1Q14687 1217 aa24.61■■□□□ 1.53
NECAB3-213ENST00000488489 GNPATO15228 680 aa24.6■■□□□ 1.53
NECAB3-213ENST00000488489 NTSR2O95665 410 aa24.6■■□□□ 1.53
NECAB3-213ENST00000488489 TIMM10P62072 90 aa24.6■■□□□ 1.53
NECAB3-213ENST00000488489 GPR108Q9NPR9 543 aa24.6■■□□□ 1.53
NECAB3-213ENST00000488489 ZNF652Q9Y2D9 606 aa24.6■■□□□ 1.53
NECAB3-213ENST00000488489 BCL2L12Q9HB09 334 aa24.59■■□□□ 1.53
NECAB3-213ENST00000488489 FAM196AQ6ZSG2 479 aa24.59■■□□□ 1.53
NECAB3-213ENST00000488489 EVI5LQ96CN4 794 aa24.59■■□□□ 1.53
NECAB3-213ENST00000488489 LRRC4BQ9NT99 713 aa24.59■■□□□ 1.53
NECAB3-213ENST00000488489 FBXO3Q9UK99 471 aa24.59■■□□□ 1.53
NECAB3-213ENST00000488489 ATP5JP18859 108 aa24.58■■□□□ 1.53
NECAB3-213ENST00000488489 TAF7LQ5H9L4 462 aa24.58■■□□□ 1.53
NECAB3-213ENST00000488489 AK7Q96M32 723 aa24.58■■□□□ 1.52
NECAB3-213ENST00000488489 NEUROD6Q96NK8 337 aa24.58■■□□□ 1.52
NECAB3-213ENST00000488489 ANKRD18BA2A2Z9 1011 aa24.57■■□□□ 1.52
NECAB3-213ENST00000488489 SRP68Q9UHB9 627 aaKnown RBP24.57■■□□□ 1.52
NECAB3-213ENST00000488489 USPL1Q5W0Q7 1092 aa24.56■■□□□ 1.52
NECAB3-213ENST00000488489 CEP126Q9P2H0 1117 aa24.56■■□□□ 1.52
NECAB3-213ENST00000488489 NARFQ9UHQ1 456 aa24.56■■□□□ 1.52
NECAB3-213ENST00000488489 RIPOR2Q9Y4F9 1068 aa24.56■■□□□ 1.52
NECAB3-213ENST00000488489 ZNF609O15014 1411 aa24.56■■□□□ 1.52
NECAB3-213ENST00000488489 SGSM2O43147 1006 aa24.56■■□□□ 1.52
NECAB3-213ENST00000488489 ANO2Q9NQ90 1003 aa24.56■■□□□ 1.52
NECAB3-213ENST00000488489 RTCBQ9Y3I0 505 aaKnown RBP24.56■■□□□ 1.52
NECAB3-213ENST00000488489 A0A1B0GUL7 405 aa24.55■■□□□ 1.52
NECAB3-213ENST00000488489 ZNF772Q68DY9 489 aaPredicted RBP24.55■■□□□ 1.52
NECAB3-213ENST00000488489 CWC27Q6UX04 472 aaKnown RBP24.55■■□□□ 1.52
NECAB3-213ENST00000488489 LDHAL6AQ6ZMR3 332 aa24.55■■□□□ 1.52
NECAB3-213ENST00000488489 EDC3Q96F86 508 aaKnown RBP24.55■■□□□ 1.52
NECAB3-213ENST00000488489 NDUFB9Q9Y6M9 179 aa24.55■■□□□ 1.52
NECAB3-213ENST00000488489 DDX60Q8IY21 1712 aaKnown RBP24.55■■□□□ 1.52
NECAB3-213ENST00000488489 TRIM37O94972 964 aa24.55■■□□□ 1.52
NECAB3-213ENST00000488489 RBM6P78332 1123 aaKnown RBP24.55■■□□□ 1.52
NECAB3-213ENST00000488489 TBC1D9BQ66K14 1250 aa24.55■■□□□ 1.52
NECAB3-213ENST00000488489 SCN7AQ01118 1682 aa24.54■■□□□ 1.52
NECAB3-213ENST00000488489 C4BP0C0L5 1744 aa24.54■■□□□ 1.52
NECAB3-213ENST00000488489 ARHGEF1Q92888 912 aaKnown RBP24.54■■□□□ 1.52
NECAB3-213ENST00000488489 BICDL1Q6ZP65 573 aa24.53■■□□□ 1.52
NECAB3-213ENST00000488489 IL27Q8NEV9 243 aa24.53■■□□□ 1.52
NECAB3-213ENST00000488489 RIC1Q4ADV7 1423 aa24.53■■□□□ 1.52
NECAB3-213ENST00000488489 RGL2O15211 777 aa24.53■■□□□ 1.52
NECAB3-213ENST00000488489 CD2BP2O95400 341 aaKnown RBP24.53■■□□□ 1.52
NECAB3-213ENST00000488489 SNX21Q969T3 373 aa24.52■■□□□ 1.52
NECAB3-213ENST00000488489 DIAPH3Q9NSV4 1193 aa24.52■■□□□ 1.52
NECAB3-213ENST00000488489 HAUS7Q99871 368 aa24.51■■□□□ 1.51
NECAB3-213ENST00000488489 SEC31BQ9NQW1 1179 aa24.51■■□□□ 1.51
NECAB3-213ENST00000488489 CNNM1Q9NRU3 951 aa24.51■■□□□ 1.51
NECAB3-213ENST00000488489 ZPR1O75312 459 aa24.5■■□□□ 1.51
NECAB3-213ENST00000488489 ERFEQ4G0M1 354 aa24.5■■□□□ 1.51
NECAB3-213ENST00000488489 METTL24Q5JXM2 366 aa24.5■■□□□ 1.51
NECAB3-213ENST00000488489 PHF14O94880 888 aa24.49■■□□□ 1.51
NECAB3-213ENST00000488489 ADORA1P30542 326 aa24.49■■□□□ 1.51
NECAB3-213ENST00000488489 VGLL2Q8N8G2 317 aa24.49■■□□□ 1.51
NECAB3-213ENST00000488489 FAM227BQ96M60 508 aa24.49■■□□□ 1.51
NECAB3-213ENST00000488489 DNAJC2Q99543 621 aaKnown RBP24.49■■□□□ 1.51
NECAB3-213ENST00000488489 FSD1Q9BTV5 496 aa24.49■■□□□ 1.51
NECAB3-213ENST00000488489 PALD1Q9ULE6 856 aa24.49■■□□□ 1.51
NECAB3-213ENST00000488489 AKAP2Q9Y2D5 859 aa24.49■■□□□ 1.51
NECAB3-213ENST00000488489 LAMB2P55268 1798 aa24.49■■□□□ 1.51
NECAB3-213ENST00000488489 LSG1Q9H089 658 aaKnown RBP24.49■■□□□ 1.51
NECAB3-213ENST00000488489 FRAT2O75474 233 aaPredicted RBP24.48■■□□□ 1.51
NECAB3-213ENST00000488489 RABEP1Q15276 862 aa24.48■■□□□ 1.51
NECAB3-213ENST00000488489 HSCBQ8IWL3 235 aa24.48■■□□□ 1.51
NECAB3-213ENST00000488489 XAGE2Q96GT9 111 aa24.48■■□□□ 1.51
NECAB3-213ENST00000488489 CCDC152Q4G0S7 254 aa24.47■■□□□ 1.51
NECAB3-213ENST00000488489 TRAPPC3LQ5T215 181 aa24.47■■□□□ 1.51
NECAB3-213ENST00000488489 C3orf67Q6ZVT6 689 aa24.47■■□□□ 1.51
NECAB3-213ENST00000488489 C4AP0C0L4 1744 aa24.47■■□□□ 1.51
NECAB3-213ENST00000488489 LRP5O75197 1615 aa24.47■■□□□ 1.51
NECAB3-213ENST00000488489 NMIQ13287 307 aaPredicted RBP24.47■■□□□ 1.51
NECAB3-213ENST00000488489 RUFY2Q8WXA3 655 aa24.47■■□□□ 1.51
NECAB3-213ENST00000488489 HSP90B1P14625 803 aaKnown RBP24.46■■□□□ 1.51
NECAB3-213ENST00000488489 SETDB2Q96T68 719 aa24.46■■□□□ 1.51
NECAB3-213ENST00000488489 RAD50Q92878 1312 aa24.46■■□□□ 1.51
NECAB3-213ENST00000488489 EPB41L2O43491 1005 aaKnown RBP24.46■■□□□ 1.51
NECAB3-213ENST00000488489 RFC4P35249 363 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms