RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 MYH3P11055 1940 aa20.35■□□□□ 0.85
ERGIC3-216ENST00000488384 LRRC37AA6NMS7 1700 aa20.34■□□□□ 0.85
ERGIC3-216ENST00000488384 PDE8AO60658 829 aa20.34■□□□□ 0.85
ERGIC3-216ENST00000488384 HSP90B1P14625 803 aaKnown RBP20.34■□□□□ 0.85
ERGIC3-216ENST00000488384 RARSP54136 660 aaKnown RBP20.34■□□□□ 0.85
ERGIC3-216ENST00000488384 CASP7P55210 303 aa20.34■□□□□ 0.85
ERGIC3-216ENST00000488384 DDX46Q7L014 1031 aaKnown RBP20.34■□□□□ 0.85
ERGIC3-216ENST00000488384 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
ERGIC3-216ENST00000488384 LMNB1P20700 586 aa20.33■□□□□ 0.85
ERGIC3-216ENST00000488384 BRPF1P55201 1214 aaPredicted RBP20.33■□□□□ 0.85
ERGIC3-216ENST00000488384 GRAPQ13588 217 aa20.33■□□□□ 0.85
ERGIC3-216ENST00000488384 SLC4A10Q6U841 1118 aa20.33■□□□□ 0.85
ERGIC3-216ENST00000488384 GRAPLQ8TC17 118 aaPredicted RBP20.33■□□□□ 0.85
ERGIC3-216ENST00000488384 RNF181Q9P0P0 153 aa20.33■□□□□ 0.85
ERGIC3-216ENST00000488384 DICER1Q9UPY3 1922 aaKnown RBP20.33■□□□□ 0.84
ERGIC3-216ENST00000488384 ALDH1L1O75891 902 aa20.31■□□□□ 0.84
ERGIC3-216ENST00000488384 CTSWP56202 376 aa20.31■□□□□ 0.84
ERGIC3-216ENST00000488384 CELF1Q92879 486 aaKnown RBP20.31■□□□□ 0.84
ERGIC3-216ENST00000488384 SRCIN1Q9C0H9 1055 aa20.31■□□□□ 0.84
ERGIC3-216ENST00000488384 CEP350Q5VT06 3117 aa20.31■□□□□ 0.84
ERGIC3-216ENST00000488384 BBOX1O75936 387 aa20.3■□□□□ 0.84
ERGIC3-216ENST00000488384 FKBP4Q02790 459 aaKnown RBP eCLIP20.3■□□□□ 0.84
ERGIC3-216ENST00000488384 CCDC152Q4G0S7 254 aa20.3■□□□□ 0.84
ERGIC3-216ENST00000488384 CC2D2BQ6DHV5 1058 aa20.3■□□□□ 0.84
ERGIC3-216ENST00000488384 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
ERGIC3-216ENST00000488384 PLA2G12BQ9BX93 195 aa20.3■□□□□ 0.84
ERGIC3-216ENST00000488384 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
ERGIC3-216ENST00000488384 CCDC85AQ96PX6 553 aaPredicted RBP20.29■□□□□ 0.84
ERGIC3-216ENST00000488384 SEC31BQ9NQW1 1179 aa20.29■□□□□ 0.84
ERGIC3-216ENST00000488384 NOB1Q9ULX3 412 aaKnown RBP20.29■□□□□ 0.84
ERGIC3-216ENST00000488384 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
ERGIC3-216ENST00000488384 GRM8O00222 908 aa20.28■□□□□ 0.84
ERGIC3-216ENST00000488384 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
ERGIC3-216ENST00000488384 NMRK2Q9NPI5 230 aa20.28■□□□□ 0.84
ERGIC3-216ENST00000488384 RTL9Q8NET4 1388 aa20.28■□□□□ 0.84
ERGIC3-216ENST00000488384 DUOX1Q9NRD9 1551 aa20.28■□□□□ 0.84
ERGIC3-216ENST00000488384 SP8Q8IXZ3 490 aa20.27■□□□□ 0.84
ERGIC3-216ENST00000488384 PSMD1Q99460 953 aa20.27■□□□□ 0.84
ERGIC3-216ENST00000488384 LTBP1Q14766 1721 aa20.27■□□□□ 0.83
ERGIC3-216ENST00000488384 ZC3H4Q9UPT8 1303 aaKnown RBP20.27■□□□□ 0.83
ERGIC3-216ENST00000488384 BCAR3O75815 825 aa20.26■□□□□ 0.83
ERGIC3-216ENST00000488384 GRIPAP1Q4V328 841 aa20.26■□□□□ 0.83
ERGIC3-216ENST00000488384 TMC4Q7Z404 712 aa20.26■□□□□ 0.83
ERGIC3-216ENST00000488384 GREM2Q9H772 168 aa20.26■□□□□ 0.83
ERGIC3-216ENST00000488384 ZNF277Q9NRM2 450 aaPredicted RBP20.26■□□□□ 0.83
ERGIC3-216ENST00000488384 SPEF2Q9C093 1822 aa20.25■□□□□ 0.83
ERGIC3-216ENST00000488384 API5Q9BZZ5 524 aaKnown RBP20.25■□□□□ 0.83
ERGIC3-216ENST00000488384 C9orf78Q9NZ63 289 aaPredicted RBP20.25■□□□□ 0.83
ERGIC3-216ENST00000488384 COL4A5P29400 1685 aa20.25■□□□□ 0.83
ERGIC3-216ENST00000488384 UTYO14607 1347 aa20.25■□□□□ 0.83
ERGIC3-216ENST00000488384 RPS8P62241 208 aaKnown RBP20.24■□□□□ 0.83
ERGIC3-216ENST00000488384 FAM161AQ3B820 660 aa20.24■□□□□ 0.83
ERGIC3-216ENST00000488384 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
ERGIC3-216ENST00000488384 CSF1RP07333 972 aa20.23■□□□□ 0.83
ERGIC3-216ENST00000488384 NBPF7P0C2Y1 421 aaPredicted RBP20.23■□□□□ 0.83
ERGIC3-216ENST00000488384 IARSP41252 1262 aaKnown RBP20.23■□□□□ 0.83
ERGIC3-216ENST00000488384 FOXO4P98177 505 aa20.23■□□□□ 0.83
ERGIC3-216ENST00000488384 EPHA10Q5JZY3 1008 aa20.23■□□□□ 0.83
ERGIC3-216ENST00000488384 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
ERGIC3-216ENST00000488384 TMX4Q9H1E5 349 aaPredicted RBP20.23■□□□□ 0.83
ERGIC3-216ENST00000488384 HSPA6P17066 643 aa20.22■□□□□ 0.83
ERGIC3-216ENST00000488384 RTFDC1Q9BY42 306 aaPredicted RBP20.22■□□□□ 0.83
ERGIC3-216ENST00000488384 TRIM27P14373 513 aa20.21■□□□□ 0.83
ERGIC3-216ENST00000488384 CCT4P50991 539 aaKnown RBP20.21■□□□□ 0.83
ERGIC3-216ENST00000488384 DPP8Q6V1X1 898 aaPredicted RBP20.21■□□□□ 0.83
ERGIC3-216ENST00000488384 ANKRD18AQ8IVF6 992 aa20.21■□□□□ 0.83
ERGIC3-216ENST00000488384 MPNDQ8N594 471 aa20.21■□□□□ 0.83
ERGIC3-216ENST00000488384 KAZALD1Q96I82 304 aa20.21■□□□□ 0.83
ERGIC3-216ENST00000488384 SUCLG2Q96I99 432 aa20.21■□□□□ 0.83
ERGIC3-216ENST00000488384 CDC5LQ99459 802 aaKnown RBP20.21■□□□□ 0.83
ERGIC3-216ENST00000488384 ITGA6P23229 1130 aa20.2■□□□□ 0.82
ERGIC3-216ENST00000488384 USP44Q9H0E7 712 aa20.2■□□□□ 0.82
ERGIC3-216ENST00000488384 TNNQ9UQP3 1299 aa20.2■□□□□ 0.82
ERGIC3-216ENST00000488384 GPSM2P81274 684 aa20.19■□□□□ 0.82
ERGIC3-216ENST00000488384 LMBR1LQ6UX01 489 aa20.19■□□□□ 0.82
ERGIC3-216ENST00000488384 FRAT1Q92837 279 aaPredicted RBP20.19■□□□□ 0.82
ERGIC3-216ENST00000488384 IPO8O15397 1037 aaKnown RBP20.18■□□□□ 0.82
ERGIC3-216ENST00000488384 ATF7IPQ6VMQ6 1270 aa20.18■□□□□ 0.82
ERGIC3-216ENST00000488384 SUPT20HQ8NEM7 779 aa20.18■□□□□ 0.82
ERGIC3-216ENST00000488384 PPIP5K2O43314 1243 aa20.17■□□□□ 0.82
ERGIC3-216ENST00000488384 TOMM70O94826 608 aa20.17■□□□□ 0.82
ERGIC3-216ENST00000488384 NSFL1CQ9UNZ2 370 aaKnown RBP20.17■□□□□ 0.82
ERGIC3-216ENST00000488384 CHMP3Q9Y3E7 222 aa20.17■□□□□ 0.82
ERGIC3-216ENST00000488384 GLTPD2A6NH11 291 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 AOC3Q16853 763 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 RABL6Q3YEC7 729 aaPredicted RBP20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 ZKSCAN2Q63HK3 967 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 LARGE2Q8N3Y3 721 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 ANKRD44Q8N8A2 993 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 BSDC1Q9NW68 430 aaPredicted RBP20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 PODXL2Q9NZ53 605 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 KDM2BQ8NHM5 1336 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 A0A1B0GUL6 1792 aa20.16■□□□□ 0.82
ERGIC3-216ENST00000488384 ANKRD18BA2A2Z9 1011 aa20.15■□□□□ 0.82
ERGIC3-216ENST00000488384 FZD9O00144 591 aa20.15■□□□□ 0.82
ERGIC3-216ENST00000488384 IGHMBP2P38935 993 aaKnown RBP20.15■□□□□ 0.82
ERGIC3-216ENST00000488384 KIAA2012Q0VF49 1180 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms