RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 ZNF609O15014 1411 aa19.27■□□□□ 0.67
RAPGEF3-211ENST00000488250 A0A0D9SFI3 127 aa19.26■□□□□ 0.67
RAPGEF3-211ENST00000488250 ZBTB1Q9Y2K1 713 aa19.26■□□□□ 0.67
RAPGEF3-211ENST00000488250 GOLGA6L22H0YM25 854 aa19.25■□□□□ 0.67
RAPGEF3-211ENST00000488250 CCDC57Q2TAC2 916 aa19.25■□□□□ 0.67
RAPGEF3-211ENST00000488250 NLRP10Q86W26 655 aa19.25■□□□□ 0.67
RAPGEF3-211ENST00000488250 SYTL4Q96C24 671 aaPredicted RBP19.25■□□□□ 0.67
RAPGEF3-211ENST00000488250 ZSWIM6Q9HCJ5 1215 aa19.25■□□□□ 0.67
RAPGEF3-211ENST00000488250 RBM8AQ9Y5S9 174 aaKnown RBP19.25■□□□□ 0.67
RAPGEF3-211ENST00000488250 ZKSCAN1P17029 563 aaPredicted RBP19.24■□□□□ 0.67
RAPGEF3-211ENST00000488250 HLFQ16534 295 aa19.24■□□□□ 0.67
RAPGEF3-211ENST00000488250 LRRC24Q50LG9 513 aa19.24■□□□□ 0.67
RAPGEF3-211ENST00000488250 PRPF40BQ6NWY9 871 aaKnown RBP19.24■□□□□ 0.67
RAPGEF3-211ENST00000488250 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.24■□□□□ 0.67
RAPGEF3-211ENST00000488250 ZDHHC9Q9Y397 364 aa19.24■□□□□ 0.67
RAPGEF3-211ENST00000488250 PKP1Q13835 747 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 FAM89AQ96GI7 184 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 PALLDQ8WX93 1383 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 RREB1Q92766 1687 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 VPS53Q5VIR6 699 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 CREB3L3Q68CJ9 461 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 MARCH10Q8NA82 808 aaPredicted RBP19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 KBTBD3Q8NAB2 608 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 ZNF594Q96JF6 807 aaPredicted RBP19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 LIMCH1Q9UPQ0 1083 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 SPEF2Q9C093 1822 aa19.23■□□□□ 0.67
RAPGEF3-211ENST00000488250 RPAP1Q9BWH6 1393 aaPredicted RBP19.22■□□□□ 0.67
RAPGEF3-211ENST00000488250 TSGA10IPQ3SY00 556 aa19.22■□□□□ 0.67
RAPGEF3-211ENST00000488250 EDC3Q96F86 508 aaKnown RBP19.22■□□□□ 0.67
RAPGEF3-211ENST00000488250 CEP126Q9P2H0 1117 aa19.22■□□□□ 0.67
RAPGEF3-211ENST00000488250 CASTP20810 708 aaKnown RBP19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 AK2P54819 239 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 RNF20Q5VTR2 975 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 USPL1Q5W0Q7 1092 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 HMG20BQ9P0W2 317 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 AKAP2Q9Y2D5 859 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 NUP98P52948 1817 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 A0A1B0GUL7 405 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 SLC27A2O14975 620 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 TAF5LO75529 589 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 BRD1O95696 1058 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 EIF5P55010 431 aaKnown RBP19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 TIMM10P62072 90 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 IFIT5Q13325 482 aaKnown RBP19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 RUFY3Q7L099 469 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 JAKMIP1Q96N16 626 aaKnown RBP19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 NEUROD6Q96NK8 337 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 PUS3Q9BZE2 481 aaKnown RBP19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 CYP46A1Q9Y6A2 500 aa19.21■□□□□ 0.67
RAPGEF3-211ENST00000488250 ADCK5Q3MIX3 580 aa19.2■□□□□ 0.66
RAPGEF3-211ENST00000488250 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
RAPGEF3-211ENST00000488250 DZIP3Q86Y13 1208 aaKnown RBP19.2■□□□□ 0.66
RAPGEF3-211ENST00000488250 ZNF34Q8IZ26 560 aa19.2■□□□□ 0.66
RAPGEF3-211ENST00000488250 DNAJC2Q99543 621 aaKnown RBP19.2■□□□□ 0.66
RAPGEF3-211ENST00000488250 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
RAPGEF3-211ENST00000488250 PSMA5P28066 241 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 KCNJ4P48050 445 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 INTS5Q6P9B9 1019 aaKnown RBP19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 FSD2A1L4K1 749 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 NUTM2BA6NNL0 878 aaPredicted RBP19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 NUTM2EB1AL46 878 aaPredicted RBP19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 MCMDC2Q4G0Z9 681 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 NOL8Q76FK4 1167 aaKnown RBP19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 NUTM2AQ8IVF1 878 aaPredicted RBP19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 TTLL11Q8NHH1 800 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 ZSCAN31Q96LW9 406 aaPredicted RBP19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 AK7Q96M32 723 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 ARXQ96QS3 562 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 ALDH8A1Q9H2A2 487 aaPredicted RBP19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 PDRG1Q9NUG6 133 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 CCDC87Q9NVE4 849 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 PAG1Q9NWQ8 432 aa19.19■□□□□ 0.66
RAPGEF3-211ENST00000488250 GPTP24298 496 aa19.18■□□□□ 0.66
RAPGEF3-211ENST00000488250 CTSWP56202 376 aa19.18■□□□□ 0.66
RAPGEF3-211ENST00000488250 L1TD1Q5T7N2 865 aaKnown RBP19.18■□□□□ 0.66
RAPGEF3-211ENST00000488250 KAT6BQ8WYB5 2073 aa19.18■□□□□ 0.66
RAPGEF3-211ENST00000488250 DDX46Q7L014 1031 aaKnown RBP19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 SH2B1Q9NRF2 756 aaPredicted RBP19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 ISY1Q9ULR0 285 aaKnown RBP19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 ZNF831Q5JPB2 1677 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 MYH3P11055 1940 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 ABCC12Q96J65 1359 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 LOC102724428A0A0B4J2F2 783 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 IRS4O14654 1257 aaPredicted RBP19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 SIK1P57059 783 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 HELLSQ9NRZ9 838 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 TRMT112Q9UI30 125 aaKnown RBP19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 RIPOR2Q9Y4F9 1068 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 NDUFB9Q9Y6M9 179 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 RIC1Q4ADV7 1423 aa19.17■□□□□ 0.66
RAPGEF3-211ENST00000488250 PDE8AO60658 829 aa19.16■□□□□ 0.66
RAPGEF3-211ENST00000488250 IFIT1P09914 478 aaKnown RBP19.16■□□□□ 0.66
RAPGEF3-211ENST00000488250 KLHL40Q2TBA0 621 aa19.16■□□□□ 0.66
RAPGEF3-211ENST00000488250 SMARCC1Q92922 1105 aaPredicted RBP19.16■□□□□ 0.66
RAPGEF3-211ENST00000488250 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.16■□□□□ 0.66
RAPGEF3-211ENST00000488250 U3KPZ7 1027 aaPredicted RBP19.16■□□□□ 0.66
RAPGEF3-211ENST00000488250 UBN2Q6ZU65 1347 aa19.16■□□□□ 0.66
RAPGEF3-211ENST00000488250 ATP6V1AP38606 617 aa19.15■□□□□ 0.66
RAPGEF3-211ENST00000488250 CRKLP46109 303 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms