RNA–Protein interactions for RNA: ENST00000488044.5

SH3YL1-224, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 4

Gene SH3YL1, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-224ENST00000488044 UTYO14607 1347 aa20.37■□□□□ 0.85
SH3YL1-224ENST00000488044 ALDH1L1O75891 902 aa20.37■□□□□ 0.85
SH3YL1-224ENST00000488044 GRAPQ13588 217 aa20.37■□□□□ 0.85
SH3YL1-224ENST00000488044 UBE3BQ7Z3V4 1068 aa20.37■□□□□ 0.85
SH3YL1-224ENST00000488044 GRAPLQ8TC17 118 aaPredicted RBP20.37■□□□□ 0.85
SH3YL1-224ENST00000488044 ZNF219Q9P2Y4 722 aaPredicted RBP20.37■□□□□ 0.85
SH3YL1-224ENST00000488044 NOB1Q9ULX3 412 aaKnown RBP20.37■□□□□ 0.85
SH3YL1-224ENST00000488044 LTBP1Q14766 1721 aa20.36■□□□□ 0.85
SH3YL1-224ENST00000488044 RTL9Q8NET4 1388 aa20.36■□□□□ 0.85
SH3YL1-224ENST00000488044 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
SH3YL1-224ENST00000488044 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
SH3YL1-224ENST00000488044 CELF1Q92879 486 aaKnown RBP20.36■□□□□ 0.85
SH3YL1-224ENST00000488044 ATP6V0A2Q9Y487 856 aa20.36■□□□□ 0.85
SH3YL1-224ENST00000488044 DICER1Q9UPY3 1922 aaKnown RBP20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 CCDC88AQ3V6T2 1871 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 DUOX1Q9NRD9 1551 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 BCAR3O75815 825 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 BBOX1O75936 387 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 HSP90B1P14625 803 aaKnown RBP20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 CTSWP56202 376 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 C9orf131Q5VYM1 1079 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 DDX46Q7L014 1031 aaKnown RBP20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 TTLL11Q8NHH1 800 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 ARHGAP45Q92619 1136 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 SRCIN1Q9C0H9 1055 aa20.35■□□□□ 0.85
SH3YL1-224ENST00000488044 CSF1RP07333 972 aa20.34■□□□□ 0.85
SH3YL1-224ENST00000488044 CC2D2BQ6DHV5 1058 aa20.34■□□□□ 0.85
SH3YL1-224ENST00000488044 SLC4A10Q6U841 1118 aa20.34■□□□□ 0.85
SH3YL1-224ENST00000488044 SEC31BQ9NQW1 1179 aa20.34■□□□□ 0.85
SH3YL1-224ENST00000488044 TIAM2Q8IVF5 1701 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 GRM8O00222 908 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 LMNB1P20700 586 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 FOXO4P98177 505 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 FKBP4Q02790 459 aaKnown RBP eCLIP20.33■□□□□ 0.851e-6■■■□□ 17
SH3YL1-224ENST00000488044 SP8Q8IXZ3 490 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 RTKN2Q8IZC4 609 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 ZNF784Q8NCA9 323 aaPredicted RBP20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 KAZALD1Q96I82 304 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 PSMD1Q99460 953 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 TAOK3Q9H2K8 898 aa20.33■□□□□ 0.85
SH3YL1-224ENST00000488044 COL4A5P29400 1685 aa20.32■□□□□ 0.84
SH3YL1-224ENST00000488044 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
SH3YL1-224ENST00000488044 CCDC152Q4G0S7 254 aa20.32■□□□□ 0.84
SH3YL1-224ENST00000488044 NBPF7P0C2Y1 421 aaPredicted RBP20.31■□□□□ 0.84
SH3YL1-224ENST00000488044 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
SH3YL1-224ENST00000488044 GRIPAP1Q4V328 841 aa20.31■□□□□ 0.84
SH3YL1-224ENST00000488044 EPHA10Q5JZY3 1008 aa20.31■□□□□ 0.84
SH3YL1-224ENST00000488044 TMC4Q7Z404 712 aa20.31■□□□□ 0.84
SH3YL1-224ENST00000488044 RTFDC1Q9BY42 306 aaPredicted RBP20.31■□□□□ 0.84
SH3YL1-224ENST00000488044 GREM2Q9H772 168 aa20.31■□□□□ 0.84
SH3YL1-224ENST00000488044 RNF181Q9P0P0 153 aa20.31■□□□□ 0.84
SH3YL1-224ENST00000488044 ZC3H4Q9UPT8 1303 aaKnown RBP20.3■□□□□ 0.84
SH3YL1-224ENST00000488044 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
SH3YL1-224ENST00000488044 USP44Q9H0E7 712 aa20.3■□□□□ 0.84
SH3YL1-224ENST00000488044 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
SH3YL1-224ENST00000488044 TRIM27P14373 513 aa20.29■□□□□ 0.84
SH3YL1-224ENST00000488044 KCNA4P22459 653 aa20.29■□□□□ 0.84
SH3YL1-224ENST00000488044 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
SH3YL1-224ENST00000488044 CCDC85AQ96PX6 553 aaPredicted RBP20.29■□□□□ 0.84
SH3YL1-224ENST00000488044 TNNQ9UQP3 1299 aa20.29■□□□□ 0.84
SH3YL1-224ENST00000488044 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
SH3YL1-224ENST00000488044 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
SH3YL1-224ENST00000488044 ATF7IPQ6VMQ6 1270 aa20.27■□□□□ 0.84
SH3YL1-224ENST00000488044 SUCLG2Q96I99 432 aa20.27■□□□□ 0.84
SH3YL1-224ENST00000488044 ZNF277Q9NRM2 450 aaPredicted RBP20.27■□□□□ 0.84
SH3YL1-224ENST00000488044 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
SH3YL1-224ENST00000488044 RABL6Q3YEC7 729 aaPredicted RBP20.26■□□□□ 0.83
SH3YL1-224ENST00000488044 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
SH3YL1-224ENST00000488044 ITGA6P23229 1130 aa20.25■□□□□ 0.83
SH3YL1-224ENST00000488044 IARSP41252 1262 aaKnown RBP20.25■□□□□ 0.83
SH3YL1-224ENST00000488044 SPEF2Q9C093 1822 aa20.25■□□□□ 0.83
SH3YL1-224ENST00000488044 GPSM2P81274 684 aa20.24■□□□□ 0.83
SH3YL1-224ENST00000488044 ANKRD44Q8N8A2 993 aa20.24■□□□□ 0.83
SH3YL1-224ENST00000488044 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
SH3YL1-224ENST00000488044 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
SH3YL1-224ENST00000488044 IPO8O15397 1037 aaKnown RBP20.23■□□□□ 0.83
SH3YL1-224ENST00000488044 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
SH3YL1-224ENST00000488044 ANKRD18AQ8IVF6 992 aa20.23■□□□□ 0.83
SH3YL1-224ENST00000488044 MPNDQ8N594 471 aa20.23■□□□□ 0.83
SH3YL1-224ENST00000488044 CDC5LQ99459 802 aaKnown RBP20.23■□□□□ 0.83
SH3YL1-224ENST00000488044 VPS33BQ9H267 617 aa20.23■□□□□ 0.83
SH3YL1-224ENST00000488044 A0A1B0GUL6 1792 aa20.22■□□□□ 0.83
SH3YL1-224ENST00000488044 BICC1Q9H694 974 aaKnown RBP20.22■□□□□ 0.83
SH3YL1-224ENST00000488044 POLLQ9UGP5 575 aa20.22■□□□□ 0.83
SH3YL1-224ENST00000488044 FZD9O00144 591 aa20.21■□□□□ 0.83
SH3YL1-224ENST00000488044 NPM3O75607 178 aaKnown RBP20.21■□□□□ 0.83
SH3YL1-224ENST00000488044 ZKSCAN2Q63HK3 967 aa20.21■□□□□ 0.83
SH3YL1-224ENST00000488044 DPP8Q6V1X1 898 aaPredicted RBP20.21■□□□□ 0.83
SH3YL1-224ENST00000488044 FRAT1Q92837 279 aaPredicted RBP20.21■□□□□ 0.83
SH3YL1-224ENST00000488044 WDR90Q96KV7 1748 aa20.2■□□□□ 0.82
SH3YL1-224ENST00000488044 KIAA2012Q0VF49 1180 aa20.2■□□□□ 0.82
SH3YL1-224ENST00000488044 MINPP1Q9UNW1 487 aa20.2■□□□□ 0.82
SH3YL1-224ENST00000488044 GLTPD2A6NH11 291 aa20.19■□□□□ 0.82
SH3YL1-224ENST00000488044 RLBP1P12271 317 aa20.19■□□□□ 0.82
SH3YL1-224ENST00000488044 AOC3Q16853 763 aa20.19■□□□□ 0.82
SH3YL1-224ENST00000488044 SUPT20HQ8NEM7 779 aa20.19■□□□□ 0.82
SH3YL1-224ENST00000488044 TBC1D16Q8TBP0 767 aa20.19■□□□□ 0.82
SH3YL1-224ENST00000488044 MEIS3Q99687 375 aa20.19■□□□□ 0.82
SH3YL1-224ENST00000488044 NSFL1CQ9UNZ2 370 aaKnown RBP20.19■□□□□ 0.82
SH3YL1-224ENST00000488044 ANKRD18BA2A2Z9 1011 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms