RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 HFE2Q6ZVN8 426 aa7.58□□□□□ -1.2
HMGB1P36-201ENST00000487709 FRRS1LQ9P0K9 344 aa7.58□□□□□ -1.2
HMGB1P36-201ENST00000487709 SASH3O75995 380 aa7.57□□□□□ -1.2
HMGB1P36-201ENST00000487709 MAP3K6O95382 1288 aa7.57□□□□□ -1.2
HMGB1P36-201ENST00000487709 RARAP10276 462 aa7.57□□□□□ -1.2
HMGB1P36-201ENST00000487709 IGF2-ASQ6U949 168 aa7.57□□□□□ -1.2
HMGB1P36-201ENST00000487709 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
HMGB1P36-201ENST00000487709 TRPM4Q8TD43 1214 aa7.57□□□□□ -1.2
HMGB1P36-201ENST00000487709 SMG9Q9H0W8 520 aaKnown RBP7.57□□□□□ -1.2
HMGB1P36-201ENST00000487709 PCMTD2Q9NV79 361 aa7.57□□□□□ -1.2
HMGB1P36-201ENST00000487709 DEAF1O75398 565 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P36-201ENST00000487709 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
HMGB1P36-201ENST00000487709 INPP5BP32019 993 aa7.56□□□□□ -1.2
HMGB1P36-201ENST00000487709 IFT43Q96FT9 208 aa7.56□□□□□ -1.2
HMGB1P36-201ENST00000487709 ALX3O95076 343 aa7.55□□□□□ -1.2
HMGB1P36-201ENST00000487709 SSTR4P31391 388 aa7.55□□□□□ -1.2
HMGB1P36-201ENST00000487709 ARSDP51689 593 aa7.55□□□□□ -1.2
HMGB1P36-201ENST00000487709 GPLD1P80108 840 aa7.55□□□□□ -1.2
HMGB1P36-201ENST00000487709 DGKZQ13574 1117 aa7.55□□□□□ -1.2
HMGB1P36-201ENST00000487709 MCTP1Q6DN14 999 aa7.55□□□□□ -1.2
HMGB1P36-201ENST00000487709 GOLGA2P5Q9HBQ8 144 aa7.55□□□□□ -1.2
HMGB1P36-201ENST00000487709 BTBD11A6QL63 1104 aa7.54□□□□□ -1.2
HMGB1P36-201ENST00000487709 LARP1Q6PKG0 1096 aaKnown RBP7.54□□□□□ -1.2
HMGB1P36-201ENST00000487709 C14orf37Q86TY3 774 aa7.54□□□□□ -1.2
HMGB1P36-201ENST00000487709 AKTIPQ9H8T0 292 aa7.54□□□□□ -1.2
HMGB1P36-201ENST00000487709 USP20Q9Y2K6 914 aa7.54□□□□□ -1.2
HMGB1P36-201ENST00000487709 DLL1O00548 723 aa7.53□□□□□ -1.2
HMGB1P36-201ENST00000487709 FSTP19883 344 aa7.53□□□□□ -1.2
HMGB1P36-201ENST00000487709 KRTAP9-9Q9BYP9 154 aa7.53□□□□□ -1.2
HMGB1P36-201ENST00000487709 KRTAP9-4Q9BYQ2 154 aa7.53□□□□□ -1.2
HMGB1P36-201ENST00000487709 TFIP11Q9UBB9 837 aaKnown RBP7.53□□□□□ -1.2
HMGB1P36-201ENST00000487709 MAFBQ9Y5Q3 323 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P36-201ENST00000487709 IGFBP4P22692 258 aa7.52□□□□□ -1.21
HMGB1P36-201ENST00000487709 DPYDQ12882 1025 aa7.52□□□□□ -1.21
HMGB1P36-201ENST00000487709 CRTC2Q53ET0 693 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P36-201ENST00000487709 GDF6Q6KF10 455 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P36-201ENST00000487709 TTC9Q92623 222 aa7.52□□□□□ -1.21
HMGB1P36-201ENST00000487709 QTRT2Q9H974 415 aaKnown RBP7.52□□□□□ -1.21
HMGB1P36-201ENST00000487709 J3QW42 95 aa7.51□□□□□ -1.21
HMGB1P36-201ENST00000487709 MICAL2O94851 1124 aa7.51□□□□□ -1.21
HMGB1P36-201ENST00000487709 ARID4AP29374 1257 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P36-201ENST00000487709 GLMNQ92990 594 aa7.51□□□□□ -1.21
HMGB1P36-201ENST00000487709 PLD4Q96BZ4 506 aa7.51□□□□□ -1.21
HMGB1P36-201ENST00000487709 NRLP54845 237 aa7.5□□□□□ -1.21
HMGB1P36-201ENST00000487709 PTK7Q13308 1070 aa7.5□□□□□ -1.21
HMGB1P36-201ENST00000487709 DZIP1LQ8IYY4 767 aaKnown RBP7.5□□□□□ -1.21
HMGB1P36-201ENST00000487709 NSUN5Q96P11 429 aaKnown RBP7.5□□□□□ -1.21
HMGB1P36-201ENST00000487709 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
HMGB1P36-201ENST00000487709 F8W735 103 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P36-201ENST00000487709 FLIIQ13045 1269 aa7.49□□□□□ -1.21
HMGB1P36-201ENST00000487709 AGGF1Q8N302 714 aaeCLIP7.49□□□□□ -1.21
HMGB1P36-201ENST00000487709 VTI1AQ96AJ9 217 aa7.49□□□□□ -1.21
HMGB1P36-201ENST00000487709 TLR7Q9NYK1 1049 aaKnown RBP7.49□□□□□ -1.21
HMGB1P36-201ENST00000487709 RTCBQ9Y3I0 505 aaKnown RBP7.49□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L21D6R901 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L17D6RBQ6 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L19D6RCP7 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L20D6RJB6 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 XYLBO75191 536 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 GLB1P16278 677 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 USP17L24Q0WX57 530 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 RGL4Q8IZJ4 473 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 IL22RA1Q8N6P7 574 aa7.48□□□□□ -1.21
HMGB1P36-201ENST00000487709 LOC102724428A0A0B4J2F2 783 aa7.47□□□□□ -1.21
HMGB1P36-201ENST00000487709 PAX4O43316 350 aa7.47□□□□□ -1.21
HMGB1P36-201ENST00000487709 PTCD1O75127 700 aaKnown RBP7.47□□□□□ -1.21
HMGB1P36-201ENST00000487709 GHRHP01286 108 aa7.47□□□□□ -1.21
HMGB1P36-201ENST00000487709 SIK1P57059 783 aa7.47□□□□□ -1.21
HMGB1P36-201ENST00000487709 C11orf91Q3C1V1 193 aa7.47□□□□□ -1.21
HMGB1P36-201ENST00000487709 ANKMY2Q8IV38 441 aa7.47□□□□□ -1.21
HMGB1P36-201ENST00000487709 CMTR1Q8N1G2 835 aaKnown RBP7.47□□□□□ -1.21
HMGB1P36-201ENST00000487709 PSAPP07602 524 aa7.46□□□□□ -1.22
HMGB1P36-201ENST00000487709 CD97P48960 835 aa7.46□□□□□ -1.22
HMGB1P36-201ENST00000487709 TMEM130Q8N3G9 435 aa7.46□□□□□ -1.22
HMGB1P36-201ENST00000487709 C11orf16Q9NQ32 467 aa7.46□□□□□ -1.22
HMGB1P36-201ENST00000487709 COL17A1Q9UMD9 1497 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 OPLAHO14841 1288 aa7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 MMP20O60882 483 aa7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 TGFB1P01137 390 aa7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 IRAK1P51617 712 aa7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 SETDB1Q15047 1291 aa7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 KANK4Q5T7N3 995 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 RBSNQ9H1K0 784 aa7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 TRIM33Q9UPN9 1127 aa7.45□□□□□ -1.22
HMGB1P36-201ENST00000487709 FOXO3O43524 673 aa7.44□□□□□ -1.22
HMGB1P36-201ENST00000487709 SLC51AQ86UW1 340 aa7.44□□□□□ -1.22
HMGB1P36-201ENST00000487709 TREML1Q86YW5 311 aa7.44□□□□□ -1.22
HMGB1P36-201ENST00000487709 CLUAP1Q96AJ1 413 aa7.44□□□□□ -1.22
HMGB1P36-201ENST00000487709 MYO19Q96H55 970 aa7.44□□□□□ -1.22
HMGB1P36-201ENST00000487709 LRFN2Q9ULH4 789 aa7.44□□□□□ -1.22
HMGB1P36-201ENST00000487709 RAXQ9Y2V3 346 aa7.44□□□□□ -1.22
HMGB1P36-201ENST00000487709 FAM196BA6NMK8 535 aa7.43□□□□□ -1.22
HMGB1P36-201ENST00000487709 MED26O95402 600 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms