RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 DPYDQ12882 1025 aa8.23□□□□□ -1.09
UBR3-211ENST00000487689 BTLAQ7Z6A9 289 aa8.23□□□□□ -1.09
UBR3-211ENST00000487689 FAM35AQ86V20 835 aa8.23□□□□□ -1.09
UBR3-211ENST00000487689 C2orf49Q9BVC5 232 aaPredicted RBP8.23□□□□□ -1.09
UBR3-211ENST00000487689 GSX2Q9BZM3 304 aa8.23□□□□□ -1.09
UBR3-211ENST00000487689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.09
UBR3-211ENST00000487689 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.23□□□□□ -1.09
UBR3-211ENST00000487689 ARID1BQ8NFD5 2236 aaPredicted RBP8.22□□□□□ -1.09
UBR3-211ENST00000487689 FAM196BA6NMK8 535 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L10C9JJH3 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L11C9JVI0 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L21D6R901 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L18D6R9N7 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L22D6RA61 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L17D6RBQ6 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L19D6RCP7 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L20D6RJB6 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 CPB1P15086 417 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 TAL1P17542 331 aaPredicted RBP8.22□□□□□ -1.09
UBR3-211ENST00000487689 NFKB1P19838 968 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 USP17L24Q0WX57 530 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 GRIK5Q16478 980 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 RTN1Q16799 776 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 POTEAQ6S8J7 498 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 SLC51AQ86UW1 340 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 ANKMY2Q8IV38 441 aa8.22□□□□□ -1.09
UBR3-211ENST00000487689 IGFBP4P22692 258 aa8.21□□□□□ -1.1
UBR3-211ENST00000487689 PTK7Q13308 1070 aa8.21□□□□□ -1.1
UBR3-211ENST00000487689 WFDC8Q8IUA0 241 aa8.21□□□□□ -1.1
UBR3-211ENST00000487689 RFX1P22670 979 aa8.2□□□□□ -1.1
UBR3-211ENST00000487689 PLAURQ03405 335 aa8.2□□□□□ -1.1
UBR3-211ENST00000487689 CCINQ13939 588 aa8.2□□□□□ -1.1
UBR3-211ENST00000487689 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
UBR3-211ENST00000487689 DZIP1LQ8IYY4 767 aaKnown RBP8.2□□□□□ -1.1
UBR3-211ENST00000487689 LPIN3Q9BQK8 851 aa8.2□□□□□ -1.1
UBR3-211ENST00000487689 RNF114Q9Y508 228 aa8.2□□□□□ -1.1
UBR3-211ENST00000487689 OAS3Q9Y6K5 1087 aaKnown RBP8.2□□□□□ -1.1
UBR3-211ENST00000487689 C21orf2O43822 256 aa8.19□□□□□ -1.1
UBR3-211ENST00000487689 IER5Q5VY09 327 aa8.19□□□□□ -1.1
UBR3-211ENST00000487689 FAM200AQ8TCP9 573 aa8.19□□□□□ -1.1
UBR3-211ENST00000487689 AKTIPQ9H8T0 292 aa8.19□□□□□ -1.1
UBR3-211ENST00000487689 FRRS1LQ9P0K9 344 aa8.19□□□□□ -1.1
UBR3-211ENST00000487689 TGFBR3LH3BV60 316 aa8.18□□□□□ -1.1
UBR3-211ENST00000487689 DEAF1O75398 565 aaPredicted RBP8.18□□□□□ -1.1
UBR3-211ENST00000487689 DKK1O94907 266 aa8.18□□□□□ -1.1
UBR3-211ENST00000487689 MED26O95402 600 aa8.18□□□□□ -1.1
UBR3-211ENST00000487689 PCSK7Q16549 785 aa8.18□□□□□ -1.1
UBR3-211ENST00000487689 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
UBR3-211ENST00000487689 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
UBR3-211ENST00000487689 ALX3O95076 343 aa8.17□□□□□ -1.1
UBR3-211ENST00000487689 ARID4AP29374 1257 aaPredicted RBP8.17□□□□□ -1.1
UBR3-211ENST00000487689 GP2P55259 537 aaKnown RBP8.17□□□□□ -1.1
UBR3-211ENST00000487689 FZD5Q13467 585 aa8.17□□□□□ -1.1
UBR3-211ENST00000487689 ELMSAN1Q6PJG2 1045 aa8.17□□□□□ -1.1
UBR3-211ENST00000487689 ZNF777Q9ULD5 760 aaPredicted RBP8.17□□□□□ -1.1
UBR3-211ENST00000487689 DLL1O00548 723 aa8.16□□□□□ -1.1
UBR3-211ENST00000487689 FOXO3O43524 673 aa8.16□□□□□ -1.1
UBR3-211ENST00000487689 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.1
UBR3-211ENST00000487689 ZBTB42B2RXF5 422 aa8.15□□□□□ -1.1
UBR3-211ENST00000487689 LGR5O75473 907 aa8.15□□□□□ -1.1
UBR3-211ENST00000487689 MLLT1Q03111 559 aaPredicted RBP8.15□□□□□ -1.1
UBR3-211ENST00000487689 PTCD1O75127 700 aaKnown RBP8.14□□□□□ -1.11
UBR3-211ENST00000487689 TTC9Q92623 222 aa8.14□□□□□ -1.11
UBR3-211ENST00000487689 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
UBR3-211ENST00000487689 MAP3K6O95382 1288 aa8.13□□□□□ -1.11
UBR3-211ENST00000487689 TGFB1P01137 390 aa8.13□□□□□ -1.11
UBR3-211ENST00000487689 IDH3AP50213 366 aa8.13□□□□□ -1.11
UBR3-211ENST00000487689 ARSDP51689 593 aa8.13□□□□□ -1.11
UBR3-211ENST00000487689 DGKZQ13574 1117 aa8.13□□□□□ -1.11
UBR3-211ENST00000487689 MRPL18Q9H0U6 180 aaKnown RBP8.13□□□□□ -1.11
UBR3-211ENST00000487689 IGLV1-40P01703 118 aa8.12□□□□□ -1.11
UBR3-211ENST00000487689 GRNP28799 593 aaKnown RBP8.12□□□□□ -1.11
UBR3-211ENST00000487689 DHX32Q7L7V1 743 aaKnown RBP8.12□□□□□ -1.11
UBR3-211ENST00000487689 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
UBR3-211ENST00000487689 TMEM130Q8N3G9 435 aa8.12□□□□□ -1.11
UBR3-211ENST00000487689 TRPM4Q8TD43 1214 aa8.12□□□□□ -1.11
UBR3-211ENST00000487689 SMG9Q9H0W8 520 aaKnown RBP8.12□□□□□ -1.11
UBR3-211ENST00000487689 KLK14Q9P0G3 267 aa8.12□□□□□ -1.11
UBR3-211ENST00000487689 ZFATQ9P243 1243 aa8.12□□□□□ -1.11
UBR3-211ENST00000487689 RAXQ9Y2V3 346 aa8.12□□□□□ -1.11
UBR3-211ENST00000487689 GSC2O15499 205 aa8.11□□□□□ -1.11
UBR3-211ENST00000487689 C11orf91Q3C1V1 193 aa8.11□□□□□ -1.11
UBR3-211ENST00000487689 CDCA8Q53HL2 280 aa8.11□□□□□ -1.11
UBR3-211ENST00000487689 NOVA2Q9UNW9 492 aaKnown RBP8.11□□□□□ -1.11
UBR3-211ENST00000487689 ADAMTS4O75173 837 aa8.1□□□□□ -1.11
UBR3-211ENST00000487689 WEE1P30291 646 aa8.1□□□□□ -1.11
UBR3-211ENST00000487689 CFAP70Q5T0N1 1121 aa8.1□□□□□ -1.11
UBR3-211ENST00000487689 C11orf16Q9NQ32 467 aa8.1□□□□□ -1.11
UBR3-211ENST00000487689 DMGDHQ9UI17 866 aaKnown RBP8.1□□□□□ -1.11
UBR3-211ENST00000487689 MICAL2O94851 1124 aa8.09□□□□□ -1.11
UBR3-211ENST00000487689 GPLD1P80108 840 aa8.09□□□□□ -1.11
UBR3-211ENST00000487689 SWI5Q1ZZU3 235 aa8.09□□□□□ -1.11
UBR3-211ENST00000487689 Q6ZS46 218 aa8.09□□□□□ -1.11
UBR3-211ENST00000487689 HFE2Q6ZVN8 426 aa8.09□□□□□ -1.11
UBR3-211ENST00000487689 BCS1LQ9Y276 419 aa8.09□□□□□ -1.11
UBR3-211ENST00000487689 RARAP10276 462 aa8.08□□□□□ -1.12
UBR3-211ENST00000487689 GLB1P16278 677 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms