RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	ADAMTS8	Q9UP79	889 aa		10.12	□□□□□ -0.79
GARNL3-218	ENST00000487565	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.12	□□□□□ -0.79
GARNL3-218	ENST00000487565	AXIN1	O15169	862 aa		10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	SIAH2	O43255	324 aa		10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	HMOX1	P09601	288 aa		10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	CTDSPL2	Q05D32	466 aa		10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	CTC1	Q2NKJ3	1217 aa		10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	SULT6B1	Q6IMI4	303 aa		10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	TOM1L2	Q6ZVM7	507 aa		10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	AEBP1	Q8IUX7	1158 aa		10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	PNN	Q9H307	717 aa	Known RBP	10.11	□□□□□ -0.79
GARNL3-218	ENST00000487565	VARS	P26640	1264 aa	Known RBP	10.1	□□□□□ -0.79
GARNL3-218	ENST00000487565	PRKAR2B	P31323	418 aa		10.1	□□□□□ -0.79
GARNL3-218	ENST00000487565	NBPF6	Q5VWK0	638 aa		10.1	□□□□□ -0.79
GARNL3-218	ENST00000487565	PPP2R2D	Q66LE6	453 aa		10.1	□□□□□ -0.79
GARNL3-218	ENST00000487565	LARP1	Q6PKG0	1096 aa	Known RBP	10.1	□□□□□ -0.79
GARNL3-218	ENST00000487565	CCDC146	Q8IYE0	955 aa		10.1	□□□□□ -0.79
GARNL3-218	ENST00000487565	CRIPAK	Q8N1N5	446 aa		10.1	□□□□□ -0.79
GARNL3-218	ENST00000487565	NBPF4	Q96M43	638 aa		10.1	□□□□□ -0.79
GARNL3-218	ENST00000487565	AFF2	P51816	1311 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	MEGF6	O75095	1541 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	AGER	Q15109	404 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	UNC5CL	Q8IV45	518 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	ARMC2	Q8NEN0	867 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	RAPGEF4	Q8WZA2	1011 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	HPS1	Q92902	700 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	FOXJ1	Q92949	421 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	RUNDC1	Q96C34	613 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	YTHDC1	Q96MU7	727 aa	Known RBP	10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	CARD10	Q9BWT7	1032 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	CCDC9	Q9Y3X0	531 aa	Known RBP	10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	WASF2	Q9Y6W5	498 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	PARP4	Q9UKK3	1724 aa	Known RBP	10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	PLEKHG2	Q9H7P9	1386 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	BCL9L	Q86UU0	1499 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	RGPD2	P0DJD1	1756 aa		10.09	□□□□□ -0.79
GARNL3-218	ENST00000487565	WNK3	Q9BYP7	1800 aa		10.08	□□□□□ -0.8
GARNL3-218	ENST00000487565	AP1G2	O75843	785 aa		10.08	□□□□□ -0.8
GARNL3-218	ENST00000487565	SMCP	P49901	116 aa	Predicted RBP	10.08	□□□□□ -0.8
GARNL3-218	ENST00000487565	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.08	□□□□□ -0.8
GARNL3-218	ENST00000487565	USP21	Q9UK80	565 aa		10.08	□□□□□ -0.8
GARNL3-218	ENST00000487565	TLL2	Q9Y6L7	1015 aa		10.08	□□□□□ -0.8
GARNL3-218	ENST00000487565	OVOS2	A0A0G2JMS6	1433 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	TAT	P17735	454 aa	Predicted RBP	10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	VPS72	Q15906	364 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	LRRN4	Q8WUT4	740 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	GOPC	Q9HD26	462 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	DISP2	A7MBM2	1401 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	ATRN	O75882	1429 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	SPATA31A1	Q5TZJ5	1347 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	SPATA31A5	Q5VU36	1347 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	SPATA31A7	Q8IWB4	1347 aa		10.07	□□□□□ -0.8
GARNL3-218	ENST00000487565	NBPF14	Q5TI25	921 aa		10.06	□□□□□ -0.8
GARNL3-218	ENST00000487565	TCP11L2	Q8N4U5	519 aa		10.06	□□□□□ -0.8
GARNL3-218	ENST00000487565	FAM174A	Q8TBP5	190 aa		10.06	□□□□□ -0.8
GARNL3-218	ENST00000487565	PLEKHF1	Q96S99	279 aa		10.06	□□□□□ -0.8
GARNL3-218	ENST00000487565	USP35	Q9P2H5	1018 aa		10.06	□□□□□ -0.8
GARNL3-218	ENST00000487565	DACH1	Q9UI36	760 aa		10.06	□□□□□ -0.8
GARNL3-218	ENST00000487565	PKD1L3	Q7Z443	1732 aa		10.06	□□□□□ -0.8
GARNL3-218	ENST00000487565	TNS2	Q63HR2	1409 aa		10.06	□□□□□ -0.8
GARNL3-218	ENST00000487565	APAF1	O14727	1248 aa		10.05	□□□□□ -0.8
GARNL3-218	ENST00000487565	IL2RB	P14784	551 aa		10.05	□□□□□ -0.8
GARNL3-218	ENST00000487565	BPHL	Q86WA6	291 aa	Predicted RBP	10.05	□□□□□ -0.8
GARNL3-218	ENST00000487565	GAS2L2	Q8NHY3	880 aa		10.05	□□□□□ -0.8
GARNL3-218	ENST00000487565	TRPC5	Q9UL62	973 aa	Predicted RBP	10.05	□□□□□ -0.8
GARNL3-218	ENST00000487565	GLI3	P10071	1580 aa		10.05	□□□□□ -0.8
GARNL3-218	ENST00000487565	LRRC37A3	O60309	1634 aa		10.04	□□□□□ -0.8
GARNL3-218	ENST00000487565	MAP3K5	Q99683	1374 aa		10.04	□□□□□ -0.8
GARNL3-218	ENST00000487565	POTEC	B2RU33	542 aa		10.04	□□□□□ -0.8
GARNL3-218	ENST00000487565	NFE2L2	Q16236	605 aa		10.04	□□□□□ -0.8
GARNL3-218	ENST00000487565	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.04	□□□□□ -0.8
GARNL3-218	ENST00000487565	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.04	□□□□□ -0.8
GARNL3-218	ENST00000487565	THRAP3	Q9Y2W1	955 aa	Known RBP	10.04	□□□□□ -0.8
GARNL3-218	ENST00000487565	RRP7A	Q9Y3A4	280 aa	Known RBP	10.04	□□□□□ -0.8
GARNL3-218	ENST00000487565	SENP3-EIF4A1	A0A087X0R7	540 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	RFC5	P40937	340 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	LMOD3	Q0VAK6	560 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	AMOT	Q4VCS5	1084 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	ZNF772	Q68DY9	489 aa	Predicted RBP	10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	NGEF	Q8N5V2	710 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	PHACTR3	Q96KR7	559 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	SPG7	Q9UQ90	795 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	ZBED9	Q6R2W3	1325 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	PCDH11X	Q9BZA7	1347 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	PCDH11Y	Q9BZA8	1340 aa		10.03	□□□□□ -0.8
GARNL3-218	ENST00000487565	THSD7A	Q9UPZ6	1657 aa		10.02	□□□□□ -0.8
GARNL3-218	ENST00000487565	TMPO	P42166	694 aa	Known RBP	10.02	□□□□□ -0.81
GARNL3-218	ENST00000487565	ARID5B	Q14865	1188 aa		10.02	□□□□□ -0.81
GARNL3-218	ENST00000487565	NR6A1	Q15406	480 aa		10.02	□□□□□ -0.81
GARNL3-218	ENST00000487565	MTHFSD	Q2M296	383 aa	Known RBP	10.02	□□□□□ -0.81
GARNL3-218	ENST00000487565	C4orf48	Q5BLP8	95 aa		10.02	□□□□□ -0.81
GARNL3-218	ENST00000487565	C1orf141	Q5JVX7	400 aa		10.02	□□□□□ -0.81
GARNL3-218	ENST00000487565	MPND	Q8N594	471 aa		10.02	□□□□□ -0.81
GARNL3-218	ENST00000487565	USP17L8	P0C7I0	530 aa		10.01	□□□□□ -0.81
GARNL3-218	ENST00000487565	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.01	□□□□□ -0.81
GARNL3-218	ENST00000487565	SHANK3	Q9BYB0	1731 aa		10	□□□□□ -0.81
GARNL3-218	ENST00000487565	MAGEB6P1	A0A0J9YX57	407 aa		10	□□□□□ -0.81

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