RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
RNF220-215ENST00000487332 DIEXFQ68CQ4 756 aaKnown RBP13.12□□□□□ -0.31
RNF220-215ENST00000487332 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
RNF220-215ENST00000487332 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
RNF220-215ENST00000487332 SUPT20HQ8NEM7 779 aa13.12□□□□□ -0.31
RNF220-215ENST00000487332 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
RNF220-215ENST00000487332 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
RNF220-215ENST00000487332 NMRK2Q9NPI5 230 aa13.12□□□□□ -0.31
RNF220-215ENST00000487332 PDE8AO60658 829 aa13.11□□□□□ -0.31
RNF220-215ENST00000487332 OLFM4Q6UX06 510 aa13.11□□□□□ -0.31
RNF220-215ENST00000487332 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
RNF220-215ENST00000487332 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
RNF220-215ENST00000487332 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
RNF220-215ENST00000487332 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
RNF220-215ENST00000487332 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
RNF220-215ENST00000487332 COL4A5P29400 1685 aa13.1□□□□□ -0.31
RNF220-215ENST00000487332 FZD9O00144 591 aa13.1□□□□□ -0.31
RNF220-215ENST00000487332 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
RNF220-215ENST00000487332 CCDC152Q4G0S7 254 aa13.1□□□□□ -0.31
RNF220-215ENST00000487332 ZNF277Q9NRM2 450 aaPredicted RBP13.1□□□□□ -0.31
RNF220-215ENST00000487332 COL4A1P02462 1669 aa13.09□□□□□ -0.31
RNF220-215ENST00000487332 H7C1W4 665 aa13.09□□□□□ -0.31
RNF220-215ENST00000487332 VEGFAP15692 232 aaPredicted RBP13.09□□□□□ -0.31
RNF220-215ENST00000487332 CTSWP56202 376 aa13.09□□□□□ -0.31
RNF220-215ENST00000487332 GCKRQ14397 625 aa13.09□□□□□ -0.31
RNF220-215ENST00000487332 ALDH1L2Q3SY69 923 aa13.09□□□□□ -0.31
RNF220-215ENST00000487332 PTPRCP08575 1304 aa13.09□□□□□ -0.31
RNF220-215ENST00000487332 CASP7P55210 303 aa13.08□□□□□ -0.32
RNF220-215ENST00000487332 FSTL1Q12841 308 aa13.08□□□□□ -0.32
RNF220-215ENST00000487332 CWF19L2Q2TBE0 894 aaKnown RBP13.08□□□□□ -0.32
RNF220-215ENST00000487332 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.32
RNF220-215ENST00000487332 MPNDQ8N594 471 aa13.08□□□□□ -0.32
RNF220-215ENST00000487332 JDP2Q8WYK2 163 aa13.08□□□□□ -0.32
RNF220-215ENST00000487332 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
RNF220-215ENST00000487332 SCN4AP35499 1836 aa13.08□□□□□ -0.32
RNF220-215ENST00000487332 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
RNF220-215ENST00000487332 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
RNF220-215ENST00000487332 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
RNF220-215ENST00000487332 BEND3Q5T5X7 828 aa13.07□□□□□ -0.32
RNF220-215ENST00000487332 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
RNF220-215ENST00000487332 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
RNF220-215ENST00000487332 PODXL2Q9NZ53 605 aa13.07□□□□□ -0.32
RNF220-215ENST00000487332 MYH3P11055 1940 aa13.07□□□□□ -0.32
RNF220-215ENST00000487332 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
RNF220-215ENST00000487332 POTECB2RU33 542 aa13.06□□□□□ -0.32
RNF220-215ENST00000487332 ALDH1L1O75891 902 aa13.06□□□□□ -0.32
RNF220-215ENST00000487332 RPS8P62241 208 aaKnown RBP13.06□□□□□ -0.32
RNF220-215ENST00000487332 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
RNF220-215ENST00000487332 GPC2Q8N158 579 aa13.06□□□□□ -0.32
RNF220-215ENST00000487332 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
RNF220-215ENST00000487332 CDC5LQ99459 802 aaKnown RBP13.06□□□□□ -0.32
RNF220-215ENST00000487332 ADAMTSL1Q8N6G6 1762 aa13.06□□□□□ -0.32
RNF220-215ENST00000487332 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 HSPA6P17066 643 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
RNF220-215ENST00000487332 UBE3BQ7Z3V4 1068 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 SLC51AQ86UW1 340 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 NIM1KQ8IY84 436 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 MIER1Q8N108 512 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 SMC1BQ8NDV3 1235 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 TTLL11Q8NHH1 800 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 ZNF609O15014 1411 aa13.05□□□□□ -0.32
RNF220-215ENST00000487332 DDNO94850 711 aaPredicted RBP13.04□□□□□ -0.32
RNF220-215ENST00000487332 CSF1RP07333 972 aa13.04□□□□□ -0.32
RNF220-215ENST00000487332 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
RNF220-215ENST00000487332 UTYO14607 1347 aa13.04□□□□□ -0.32
RNF220-215ENST00000487332 F6X3S4 739 aa13.03□□□□□ -0.32
RNF220-215ENST00000487332 GRM8O00222 908 aa13.03□□□□□ -0.32
RNF220-215ENST00000487332 AOC3Q16853 763 aa13.03□□□□□ -0.32
RNF220-215ENST00000487332 SSH1Q8WYL5 1049 aa13.03□□□□□ -0.32
RNF220-215ENST00000487332 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
RNF220-215ENST00000487332 EYA3Q99504 573 aa13.03□□□□□ -0.32
RNF220-215ENST00000487332 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
RNF220-215ENST00000487332 SEC31BQ9NQW1 1179 aa13.03□□□□□ -0.32
RNF220-215ENST00000487332 BSDC1Q9NW68 430 aaPredicted RBP13.03□□□□□ -0.32
RNF220-215ENST00000487332 TAF1P21675 1872 aa13.02□□□□□ -0.32
RNF220-215ENST00000487332 GREM2Q9H772 168 aa13.02□□□□□ -0.33
RNF220-215ENST00000487332 ZNRF3Q9ULT6 936 aa13.02□□□□□ -0.33
RNF220-215ENST00000487332 XDHP47989 1333 aa13.02□□□□□ -0.33
RNF220-215ENST00000487332 GPSM2P81274 684 aa13.01□□□□□ -0.33
RNF220-215ENST00000487332 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
RNF220-215ENST00000487332 JARID2Q92833 1246 aaPredicted RBP13.01□□□□□ -0.33
RNF220-215ENST00000487332 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
RNF220-215ENST00000487332 HACL1Q9UJ83 578 aa13.01□□□□□ -0.33
RNF220-215ENST00000487332 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
RNF220-215ENST00000487332 MED23Q9ULK4 1368 aa13□□□□□ -0.33
RNF220-215ENST00000487332 KIF16BQ96L93 1317 aa13□□□□□ -0.33
RNF220-215ENST00000487332 ITGA6P23229 1130 aa13□□□□□ -0.33
RNF220-215ENST00000487332 IGHMBP2P38935 993 aaKnown RBP13□□□□□ -0.33
RNF220-215ENST00000487332 APLP1P51693 650 aa13□□□□□ -0.33
RNF220-215ENST00000487332 FOXO4P98177 505 aa13□□□□□ -0.33
RNF220-215ENST00000487332 WASHC4Q2M389 1173 aa13□□□□□ -0.33
RNF220-215ENST00000487332 PNMA8AQ86V59 439 aaPredicted RBP13□□□□□ -0.33
RNF220-215ENST00000487332 LDHDQ86WU2 507 aa13□□□□□ -0.33
RNF220-215ENST00000487332 SMC4Q9NTJ3 1288 aa13□□□□□ -0.33
RNF220-215ENST00000487332 POLLQ9UGP5 575 aa13□□□□□ -0.33
RNF220-215ENST00000487332 GGA1Q9UJY5 639 aa13□□□□□ -0.33
RNF220-215ENST00000487332 ZBED9Q6R2W3 1325 aa12.99□□□□□ -0.33
RNF220-215ENST00000487332 ATP2B4P23634 1241 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms