RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 ZNF142P52746 1687 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 STRCQ7RTU9 1775 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 SOX12O15370 315 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 ZSCAN12O43309 604 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 IFIT2P09913 472 aaKnown RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 CCDC158Q5M9N0 1113 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 G2E3Q7L622 706 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 FSIP1Q8NA03 581 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 FBXO18Q8NFZ0 1043 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 ACBD3Q9H3P7 528 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 YY1AP1Q9H869 796 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 STAP2Q9UGK3 403 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 SETBP1Q9Y6X0 1596 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 KNDC1Q76NI1 1749 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 ATP8B1O43520 1251 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 ETF1P62495 437 aaKnown RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 MCM6Q14566 821 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 LRRFIP1Q32MZ4 808 aaKnown RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 SRLQ86TD4 932 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 CCDC102AQ96A19 550 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 IL25Q9H293 177 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 IMPACTQ9P2X3 320 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 JRKLQ9Y4A0 524 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 SETD1BQ9UPS6 1966 aaKnown RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 LOC102724159A0A0B4J2E5 919 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 PSDA5PKW4 1024 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 ERLIN1O75477 346 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 GLRX3O76003 335 aaKnown RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 PWP2Q15269 919 aaKnown RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 SKIDA1Q1XH10 827 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 HSP90AB4PQ58FF6 505 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 SECISBP2LQ93073 1101 aaKnown RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 ZNF396Q96N95 335 aaPredicted RBP7.26□□□□□ -1.25
VPS13D-209ENST00000487188 BRMS1Q9HCU9 246 aa7.26□□□□□ -1.25
VPS13D-209ENST00000487188 TULP4Q9NRJ4 1543 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 A0A087WWV3 80 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 EFCAB8A8MWE9 144 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 SRGAP3O43295 1099 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 SERPINC1P01008 464 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 ACTN2P35609 894 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 GNG11P61952 73 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 CLASRPQ8N2M8 674 aaKnown RBP7.25□□□□□ -1.25
VPS13D-209ENST00000487188 PDILTQ8N807 584 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 LRRN4CLQ8ND94 238 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 RHPN1Q8TCX5 695 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 BRF1Q92994 677 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 EXOC4Q96A65 974 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 FAM53CQ9NYF3 392 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 HDAC5Q9UQL6 1122 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 RBM8AQ9Y5S9 174 aaKnown RBP7.25□□□□□ -1.25
VPS13D-209ENST00000487188 ZC3H13Q5T200 1668 aaKnown RBP7.25□□□□□ -1.25
VPS13D-209ENST00000487188 SOS1Q07889 1333 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-209ENST00000487188 SETQ01105 290 aaPredicted RBP7.25□□□□□ -1.25
VPS13D-209ENST00000487188 ADCK5Q3MIX3 580 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 ZSWIM4Q9H7M6 989 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 L2HGDHQ9H9P8 463 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 GEMIN8Q9NWZ8 242 aaKnown RBP7.25□□□□□ -1.25
VPS13D-209ENST00000487188 IL13P35225 146 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 PPP2R3AQ06190 1150 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 FLIIQ13045 1269 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 JAKMIP3Q5VZ66 844 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 PPM1EQ8WY54 764 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 GOLGA1Q92805 767 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 TAOK2Q9UL54 1235 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 TPCN1Q9ULQ1 816 aa7.25□□□□□ -1.25
VPS13D-209ENST00000487188 TTC21AQ8NDW8 1320 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 BIN1O00499 593 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CFAP100Q494V2 611 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CCDC30Q5VVM6 783 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 XPO4Q9C0E2 1151 aaKnown RBP7.24□□□□□ -1.25
VPS13D-209ENST00000487188 LCMT1Q9UIC8 334 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CFAP65Q6ZU64 1925 aaKnown RBP7.24□□□□□ -1.25
VPS13D-209ENST00000487188 VWDEQ8N2E2 1590 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 PHLPP2Q6ZVD8 1323 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CBFA2T2O43439 604 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 IQCB1Q15051 598 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CCDC91Q7Z6B0 441 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 NME9Q86XW9 330 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 GPR161Q8N6U8 529 aaKnown RBP7.24□□□□□ -1.25
VPS13D-209ENST00000487188 ERCC4Q92889 916 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-209ENST00000487188 TM6SF1Q9BZW5 370 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 PNPLA6Q8IY17 1366 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 NPATQ14207 1427 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 PTH1RQ03431 593 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 E4F1Q66K89 784 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CREB3L3Q68CJ9 461 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CC2D1AQ6P1N0 951 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-209ENST00000487188 PPP1R42Q7Z4L9 355 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 FSD1Q9BTV5 496 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 ZSCAN16Q9H4T2 348 aaPredicted RBP7.24□□□□□ -1.25
VPS13D-209ENST00000487188 ZSWIM6Q9HCJ5 1215 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 ADAM21Q9UKJ8 722 aa7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CPSF1Q10570 1443 aaKnown RBP7.24□□□□□ -1.25
VPS13D-209ENST00000487188 CHL1O00533 1208 aa7.23□□□□□ -1.25
VPS13D-209ENST00000487188 TADA3O75528 432 aa7.23□□□□□ -1.25
VPS13D-209ENST00000487188 PGBD1Q96JS3 809 aa7.23□□□□□ -1.25
VPS13D-209ENST00000487188 NCAPGQ9BPX3 1015 aa7.23□□□□□ -1.25
VPS13D-209ENST00000487188 EPC1Q9H2F5 836 aa7.23□□□□□ -1.25
VPS13D-209ENST00000487188 HIP1O00291 1037 aa7.23□□□□□ -1.25
VPS13D-209ENST00000487188 TOP1P11387 765 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms