RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 INPP5BP32019 993 aa7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 ELMSAN1Q6PJG2 1045 aa7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 TRPM4Q8TD43 1214 aa7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 IFT43Q96FT9 208 aa7.39□□□□□ -1.23
SNRNP27-204ENST00000487029 MED26O95402 600 aa7.38□□□□□ -1.23
SNRNP27-204ENST00000487029 RTN1Q16799 776 aa7.38□□□□□ -1.23
SNRNP27-204ENST00000487029 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
SNRNP27-204ENST00000487029 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
SNRNP27-204ENST00000487029 KLK14Q9P0G3 267 aa7.38□□□□□ -1.23
SNRNP27-204ENST00000487029 GTF3C3Q9Y5Q9 886 aa7.38□□□□□ -1.23
SNRNP27-204ENST00000487029 SASH3O75995 380 aa7.37□□□□□ -1.23
SNRNP27-204ENST00000487029 HIF1AQ16665 826 aa7.37□□□□□ -1.23
SNRNP27-204ENST00000487029 TTC9Q92623 222 aa7.37□□□□□ -1.23
SNRNP27-204ENST00000487029 SMG9Q9H0W8 520 aaKnown RBP7.37□□□□□ -1.23
SNRNP27-204ENST00000487029 AKTIPQ9H8T0 292 aa7.37□□□□□ -1.23
SNRNP27-204ENST00000487029 CD97P48960 835 aa7.36□□□□□ -1.23
SNRNP27-204ENST00000487029 IDH3AP50213 366 aa7.36□□□□□ -1.23
SNRNP27-204ENST00000487029 PCSK7Q16549 785 aa7.36□□□□□ -1.23
SNRNP27-204ENST00000487029 RASA1P20936 1047 aa7.35□□□□□ -1.23
SNRNP27-204ENST00000487029 GPLD1P80108 840 aa7.35□□□□□ -1.23
SNRNP27-204ENST00000487029 F8W735 103 aaPredicted RBP7.34□□□□□ -1.23
SNRNP27-204ENST00000487029 RARAP10276 462 aa7.34□□□□□ -1.23
SNRNP27-204ENST00000487029 USP20Q9Y2K6 914 aa7.34□□□□□ -1.23
SNRNP27-204ENST00000487029 SEC13P55735 322 aa7.33□□□□□ -1.24
SNRNP27-204ENST00000487029 AGGF1Q8N302 714 aaeCLIP7.33□□□□□ -1.24
SNRNP27-204ENST00000487029 TMEM130Q8N3G9 435 aa7.33□□□□□ -1.24
SNRNP27-204ENST00000487029 FMNL2Q96PY5 1086 aa7.33□□□□□ -1.24
SNRNP27-204ENST00000487029 J3QW42 95 aa7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 PAX4O43316 350 aa7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 ADAMTS4O75173 837 aa7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 EPB42P16452 691 aa7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 DGKZQ13574 1117 aa7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 WWC1Q8IX03 1113 aa7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 HINFPQ9BQA5 517 aa7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 RBM19Q9Y4C8 960 aaKnown RBP7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 OAS3Q9Y6K5 1087 aaKnown RBP7.32□□□□□ -1.24
SNRNP27-204ENST00000487029 OPLAHO14841 1288 aa7.31□□□□□ -1.24
SNRNP27-204ENST00000487029 SETDB1Q15047 1291 aa7.31□□□□□ -1.24
SNRNP27-204ENST00000487029 MRPL18Q9H0U6 180 aaKnown RBP7.31□□□□□ -1.24
SNRNP27-204ENST00000487029 QTRT2Q9H974 415 aaKnown RBP7.31□□□□□ -1.24
SNRNP27-204ENST00000487029 MICAL2O94851 1124 aa7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 TGFB1P01137 390 aa7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 EIF2AK2P19525 551 aaKnown RBP7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 ARSDP51689 593 aa7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 NRLP54845 237 aa7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 GDF6Q6KF10 455 aaPredicted RBP7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 Q6ZS46 218 aa7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 SLC51AQ86UW1 340 aa7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 PLD4Q96BZ4 506 aa7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 TLR7Q9NYK1 1049 aaKnown RBP7.3□□□□□ -1.24
SNRNP27-204ENST00000487029 TAL1P17542 331 aaPredicted RBP7.29□□□□□ -1.24
SNRNP27-204ENST00000487029 IGFBP4P22692 258 aa7.29□□□□□ -1.24
SNRNP27-204ENST00000487029 CRTC2Q53ET0 693 aaPredicted RBP7.29□□□□□ -1.24
SNRNP27-204ENST00000487029 IL22RA1Q8N6P7 574 aa7.29□□□□□ -1.24
SNRNP27-204ENST00000487029 UBL7Q96S82 380 aaPredicted RBP7.29□□□□□ -1.24
SNRNP27-204ENST00000487029 TFIP11Q9UBB9 837 aaKnown RBP7.29□□□□□ -1.24
SNRNP27-204ENST00000487029 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
SNRNP27-204ENST00000487029 KIAA1324LA8MWY0 1029 aaPredicted RBP7.28□□□□□ -1.24
SNRNP27-204ENST00000487029 IRAK1P51617 712 aa7.28□□□□□ -1.24
SNRNP27-204ENST00000487029 SIK1P57059 783 aa7.28□□□□□ -1.24
SNRNP27-204ENST00000487029 DPYDQ12882 1025 aa7.28□□□□□ -1.24
SNRNP27-204ENST00000487029 ERICH6Q7L0X2 663 aa7.28□□□□□ -1.24
SNRNP27-204ENST00000487029 RAXQ9Y2V3 346 aa7.28□□□□□ -1.24
SNRNP27-204ENST00000487029 RAD21O60216 631 aa7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 IGLV1-40P01703 118 aa7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 TXKP42681 527 aa7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 GP2P55259 537 aaKnown RBP7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 PTK7Q13308 1070 aa7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 NSUN5Q96P11 429 aaKnown RBP7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 C11orf16Q9NQ32 467 aa7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 RTCBQ9Y3I0 505 aaKnown RBP7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 MAFBQ9Y5Q3 323 aaPredicted RBP7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 ARID1BQ8NFD5 2236 aaPredicted RBP7.27□□□□□ -1.25
SNRNP27-204ENST00000487029 MMP20O60882 483 aa7.26□□□□□ -1.25
SNRNP27-204ENST00000487029 EGFRP00533 1210 aa7.26□□□□□ -1.25
SNRNP27-204ENST00000487029 GLB1P16278 677 aa7.26□□□□□ -1.25
SNRNP27-204ENST00000487029 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.26□□□□□ -1.25
SNRNP27-204ENST00000487029 GALNT11Q8NCW6 608 aa7.26□□□□□ -1.25
SNRNP27-204ENST00000487029 LRFN2Q9ULH4 789 aa7.26□□□□□ -1.25
SNRNP27-204ENST00000487029 TIMELESSQ9UNS1 1208 aa7.26□□□□□ -1.25
SNRNP27-204ENST00000487029 TRIM33Q9UPN9 1127 aa7.26□□□□□ -1.25
SNRNP27-204ENST00000487029 COBLO75128 1261 aa7.25□□□□□ -1.25
SNRNP27-204ENST00000487029 XYLBO75191 536 aa7.25□□□□□ -1.25
SNRNP27-204ENST00000487029 WISP1O95388 367 aa7.25□□□□□ -1.25
SNRNP27-204ENST00000487029 C11orf91Q3C1V1 193 aa7.25□□□□□ -1.25
SNRNP27-204ENST00000487029 KANK4Q5T7N3 995 aaPredicted RBP7.25□□□□□ -1.25
SNRNP27-204ENST00000487029 ARMC10Q8N2F6 343 aa7.25□□□□□ -1.25
SNRNP27-204ENST00000487029 KCNMB2Q9Y691 235 aa7.25□□□□□ -1.25
SNRNP27-204ENST00000487029 YBX3P16989 372 aaKnown RBP eCLIP7.24□□□□□ -1.25
SNRNP27-204ENST00000487029 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
SNRNP27-204ENST00000487029 ZDHHC13Q8IUH4 622 aa7.24□□□□□ -1.25
SNRNP27-204ENST00000487029 RGL4Q8IZJ4 473 aa7.24□□□□□ -1.25
SNRNP27-204ENST00000487029 CMTR1Q8N1G2 835 aaKnown RBP7.24□□□□□ -1.25
SNRNP27-204ENST00000487029 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
SNRNP27-204ENST00000487029 KCNK4Q9NYG8 393 aa7.24□□□□□ -1.25
SNRNP27-204ENST00000487029 STOML1Q9UBI4 398 aa7.24□□□□□ -1.25
SNRNP27-204ENST00000487029 TM4SF5O14894 197 aa7.23□□□□□ -1.25
SNRNP27-204ENST00000487029 PTCD1O75127 700 aaKnown RBP7.23□□□□□ -1.25
SNRNP27-204ENST00000487029 UBTFP17480 764 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms