RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 SLC30A3Q99726 388 aa8.43□□□□□ -1.06
LMBR1-218ENST00000486837 DNAJC25Q9H1X3 360 aa8.43□□□□□ -1.06
LMBR1-218ENST00000486837 NSFL1CQ9UNZ2 370 aaKnown RBP8.43□□□□□ -1.06
LMBR1-218ENST00000486837 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.43□□□□□ -1.06
LMBR1-218ENST00000486837 MAP3K6O95382 1288 aa8.42□□□□□ -1.06
LMBR1-218ENST00000486837 P4HBP07237 508 aaKnown RBP8.42□□□□□ -1.06
LMBR1-218ENST00000486837 BMP4P12644 408 aa8.42□□□□□ -1.06
LMBR1-218ENST00000486837 NFX1Q12986 1120 aaKnown RBP8.42□□□□□ -1.06
LMBR1-218ENST00000486837 TTC39BQ5VTQ0 682 aaPredicted RBP8.42□□□□□ -1.06
LMBR1-218ENST00000486837 IRF7Q92985 503 aa8.42□□□□□ -1.06
LMBR1-218ENST00000486837 PMEPA1Q969W9 287 aa8.42□□□□□ -1.06
LMBR1-218ENST00000486837 MBIPQ9NS73 344 aa8.42□□□□□ -1.06
LMBR1-218ENST00000486837 TMEM63CQ9P1W3 806 aa8.42□□□□□ -1.06
LMBR1-218ENST00000486837 RARAP10276 462 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 NFKB1P19838 968 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 TARSP26639 723 aaKnown RBP8.41□□□□□ -1.06
LMBR1-218ENST00000486837 MAP2K3P46734 347 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 ZNF468Q5VIY5 522 aaPredicted RBP8.41□□□□□ -1.06
LMBR1-218ENST00000486837 KRT25Q7Z3Z0 450 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 FOXD4L4Q8WXT5 416 aaPredicted RBP8.41□□□□□ -1.06
LMBR1-218ENST00000486837 BHMTQ93088 406 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 CSRNP1Q96S65 589 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 PRR12Q9ULL5 1215 aa8.41□□□□□ -1.06
LMBR1-218ENST00000486837 RBM47A0AV96 593 aaKnown RBP8.4□□□□□ -1.06
LMBR1-218ENST00000486837 C2CD2LO14523 706 aa8.4□□□□□ -1.06
LMBR1-218ENST00000486837 CPNE3O75131 537 aaKnown RBP8.4□□□□□ -1.06
LMBR1-218ENST00000486837 PHACTR2O75167 634 aa8.4□□□□□ -1.06
LMBR1-218ENST00000486837 HOXD8P13378 290 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-218ENST00000486837 SOX18P35713 384 aa8.4□□□□□ -1.06
LMBR1-218ENST00000486837 MAPK8P45983 427 aa8.4□□□□□ -1.06
LMBR1-218ENST00000486837 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
LMBR1-218ENST00000486837 TLR7Q9NYK1 1049 aaKnown RBP8.4□□□□□ -1.06
LMBR1-218ENST00000486837 ZFATQ9P243 1243 aa8.4□□□□□ -1.06
LMBR1-218ENST00000486837 FOXD3Q9UJU5 478 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-218ENST00000486837 ERBB4Q15303 1308 aa8.39□□□□□ -1.07
LMBR1-218ENST00000486837 EIF1AYO14602 144 aaKnown RBP8.39□□□□□ -1.07
LMBR1-218ENST00000486837 MMP20O60882 483 aa8.39□□□□□ -1.07
LMBR1-218ENST00000486837 SIN3BO75182 1162 aa8.39□□□□□ -1.07
LMBR1-218ENST00000486837 ARAFP10398 606 aa8.39□□□□□ -1.07
LMBR1-218ENST00000486837 ATP2B2Q01814 1243 aa8.39□□□□□ -1.07
LMBR1-218ENST00000486837 ORC1Q13415 861 aa8.39□□□□□ -1.07
LMBR1-218ENST00000486837 ZNF326Q5BKZ1 582 aaKnown RBP8.39□□□□□ -1.07
LMBR1-218ENST00000486837 OR13H1Q8NG92 308 aa8.39□□□□□ -1.07
LMBR1-218ENST00000486837 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-218ENST00000486837 ZFYVE28Q9HCC9 887 aa8.39□□□□□ -1.07
LMBR1-218ENST00000486837 PNMA6FA0A0J9YX94 578 aa8.38□□□□□ -1.07
LMBR1-218ENST00000486837 PSAPP07602 524 aa8.38□□□□□ -1.07
LMBR1-218ENST00000486837 ALG1LQ6GMV1 187 aa8.38□□□□□ -1.07
LMBR1-218ENST00000486837 DHX32Q7L7V1 743 aaKnown RBP8.38□□□□□ -1.07
LMBR1-218ENST00000486837 SYT9Q86SS6 491 aa8.38□□□□□ -1.07
LMBR1-218ENST00000486837 C1orf127Q8N9H9 656 aa8.38□□□□□ -1.07
LMBR1-218ENST00000486837 FBF1Q8TES7 1133 aa8.38□□□□□ -1.07
LMBR1-218ENST00000486837 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
LMBR1-218ENST00000486837 CNTN3Q9P232 1028 aa8.38□□□□□ -1.07
LMBR1-218ENST00000486837 PHF20L1A8MW92 1017 aa8.37□□□□□ -1.07
LMBR1-218ENST00000486837 PRPF40AO75400 957 aaKnown RBP8.37□□□□□ -1.07
LMBR1-218ENST00000486837 LDHBP07195 334 aaKnown RBP8.37□□□□□ -1.07
LMBR1-218ENST00000486837 CES1P23141 567 aa8.37□□□□□ -1.07
LMBR1-218ENST00000486837 NRLP54845 237 aa8.37□□□□□ -1.07
LMBR1-218ENST00000486837 PLAURQ03405 335 aa8.37□□□□□ -1.07
LMBR1-218ENST00000486837 PCSK7Q16549 785 aa8.37□□□□□ -1.07
LMBR1-218ENST00000486837 RAB44Q7Z6P3 723 aaPredicted RBP8.37□□□□□ -1.07
LMBR1-218ENST00000486837 GIPC2Q8TF65 315 aa8.37□□□□□ -1.07
LMBR1-218ENST00000486837 IGF1RP08069 1367 aa8.36□□□□□ -1.07
LMBR1-218ENST00000486837 ZNF16P17020 682 aaPredicted RBP8.36□□□□□ -1.07
LMBR1-218ENST00000486837 ADH6P28332 368 aa8.36□□□□□ -1.07
LMBR1-218ENST00000486837 SRSF11Q05519 484 aaKnown RBP8.36□□□□□ -1.07
LMBR1-218ENST00000486837 RNFT1Q5M7Z0 435 aa8.36□□□□□ -1.07
LMBR1-218ENST00000486837 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
LMBR1-218ENST00000486837 TNFRSF25Q93038 417 aa8.36□□□□□ -1.07
LMBR1-218ENST00000486837 EREGO14944 169 aa8.35□□□□□ -1.07
LMBR1-218ENST00000486837 KIF4AO95239 1232 aa8.35□□□□□ -1.07
LMBR1-218ENST00000486837 GPLD1P80108 840 aa8.35□□□□□ -1.07
LMBR1-218ENST00000486837 GALNT12Q8IXK2 581 aa8.35□□□□□ -1.07
LMBR1-218ENST00000486837 ADARB2-AS1A8MUL3 147 aa8.34□□□□□ -1.07
LMBR1-218ENST00000486837 CYP2E1P05181 493 aaPredicted RBP8.34□□□□□ -1.07
LMBR1-218ENST00000486837 PCBP4P57723 403 aaKnown RBP8.34□□□□□ -1.07
LMBR1-218ENST00000486837 HYAL2Q12891 473 aa8.34□□□□□ -1.07
LMBR1-218ENST00000486837 CCDC74AQ96AQ1 378 aa8.34□□□□□ -1.07
LMBR1-218ENST00000486837 BCL11AQ9H165 835 aa8.34□□□□□ -1.07
LMBR1-218ENST00000486837 SALL4Q9UJQ4 1053 aa8.34□□□□□ -1.07
LMBR1-218ENST00000486837 GDF2Q9UK05 429 aaPredicted RBP8.34□□□□□ -1.07
LMBR1-218ENST00000486837 WFS1O76024 890 aa8.33□□□□□ -1.08
LMBR1-218ENST00000486837 EDN3P14138 238 aa8.33□□□□□ -1.08
LMBR1-218ENST00000486837 KRT76Q01546 638 aa8.33□□□□□ -1.08
LMBR1-218ENST00000486837 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
LMBR1-218ENST00000486837 GOLGA6L1Q8N7Z2 621 aa8.33□□□□□ -1.08
LMBR1-218ENST00000486837 FRMD6Q96NE9 622 aa8.33□□□□□ -1.08
LMBR1-218ENST00000486837 UBE2OQ9C0C9 1292 aaKnown RBP8.33□□□□□ -1.08
LMBR1-218ENST00000486837 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
LMBR1-218ENST00000486837 WWC3Q9ULE0 1092 aa8.33□□□□□ -1.08
LMBR1-218ENST00000486837 ITGAEP38570 1179 aa8.32□□□□□ -1.08
LMBR1-218ENST00000486837 CNTNAP3BQ96NU0 1288 aa8.32□□□□□ -1.08
LMBR1-218ENST00000486837 MDFIQ99750 246 aa8.32□□□□□ -1.08
LMBR1-218ENST00000486837 OXCT2Q9BYC2 517 aaPredicted RBP8.32□□□□□ -1.08
LMBR1-218ENST00000486837 CNTNAP3Q9BZ76 1288 aa8.32□□□□□ -1.08
LMBR1-218ENST00000486837 DNAJB12Q9NXW2 375 aaKnown RBP8.32□□□□□ -1.08
LMBR1-218ENST00000486837 KANSL3Q9P2N6 904 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms