RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-208ENST00000486720 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
APH1A-208ENST00000486720 CENPBP07199 599 aaPredicted RBP18.41■□□□□ 0.54
APH1A-208ENST00000486720 MVPQ14764 893 aaKnown RBP18.41■□□□□ 0.54
APH1A-208ENST00000486720 TTLL6Q8N841 843 aa18.41■□□□□ 0.54
APH1A-208ENST00000486720 MEIS3Q99687 375 aa18.41■□□□□ 0.54
APH1A-208ENST00000486720 DDX19BQ9UMR2 479 aa18.41■□□□□ 0.54
APH1A-208ENST00000486720 COL11A2P13942 1736 aaPredicted RBP18.4■□□□□ 0.54
APH1A-208ENST00000486720 DLEC1Q9Y238 1755 aa18.4■□□□□ 0.54
APH1A-208ENST00000486720 DALRD3Q5D0E6 543 aaKnown RBP18.4■□□□□ 0.54
APH1A-208ENST00000486720 TTLL11Q8NHH1 800 aa18.4■□□□□ 0.54
APH1A-208ENST00000486720 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
APH1A-208ENST00000486720 RTL9Q8NET4 1388 aa18.4■□□□□ 0.54
APH1A-208ENST00000486720 CSF1RP07333 972 aa18.39■□□□□ 0.53
APH1A-208ENST00000486720 FOXO4P98177 505 aa18.39■□□□□ 0.53
APH1A-208ENST00000486720 COG6Q9Y2V7 657 aa18.39■□□□□ 0.53
APH1A-208ENST00000486720 GNAI2P04899 355 aa18.38■□□□□ 0.53
APH1A-208ENST00000486720 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
APH1A-208ENST00000486720 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
APH1A-208ENST00000486720 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
APH1A-208ENST00000486720 ZBTB7BO15156 539 aaPredicted RBP18.37■□□□□ 0.53
APH1A-208ENST00000486720 BBOX1O75936 387 aa18.37■□□□□ 0.53
APH1A-208ENST00000486720 GRAPQ13588 217 aa18.37■□□□□ 0.53
APH1A-208ENST00000486720 RABL6Q3YEC7 729 aaPredicted RBP18.37■□□□□ 0.53
APH1A-208ENST00000486720 PRPF40BQ6NWY9 871 aaKnown RBP18.37■□□□□ 0.53
APH1A-208ENST00000486720 LMBR1LQ6UX01 489 aa18.37■□□□□ 0.53
APH1A-208ENST00000486720 TMC4Q7Z404 712 aa18.37■□□□□ 0.53
APH1A-208ENST00000486720 GRAPLQ8TC17 118 aaPredicted RBP18.37■□□□□ 0.53
APH1A-208ENST00000486720 KAZALD1Q96I82 304 aa18.37■□□□□ 0.53
APH1A-208ENST00000486720 CDC5LQ99459 802 aaKnown RBP18.37■□□□□ 0.53
APH1A-208ENST00000486720 BICC1Q9H694 974 aaKnown RBP18.37■□□□□ 0.53
APH1A-208ENST00000486720 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
APH1A-208ENST00000486720 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
APH1A-208ENST00000486720 MYH3P11055 1940 aa18.36■□□□□ 0.53
APH1A-208ENST00000486720 EPHA10Q5JZY3 1008 aa18.36■□□□□ 0.53
APH1A-208ENST00000486720 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
APH1A-208ENST00000486720 GREM2Q9H772 168 aa18.36■□□□□ 0.53
APH1A-208ENST00000486720 LRRFIP2Q9Y608 721 aaKnown RBP18.36■□□□□ 0.53
APH1A-208ENST00000486720 ANKRD18BA2A2Z9 1011 aa18.35■□□□□ 0.53
APH1A-208ENST00000486720 IFIT5Q13325 482 aaKnown RBP18.35■□□□□ 0.53
APH1A-208ENST00000486720 CCDC57Q2TAC2 916 aa18.35■□□□□ 0.53
APH1A-208ENST00000486720 FAM161AQ3B820 660 aa18.35■□□□□ 0.53
APH1A-208ENST00000486720 SOGA3Q5TF21 947 aa18.35■□□□□ 0.53
APH1A-208ENST00000486720 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
APH1A-208ENST00000486720 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
APH1A-208ENST00000486720 BRCA1P38398 1863 aaKnown RBP18.35■□□□□ 0.53
APH1A-208ENST00000486720 PPEF1O14829 653 aaPredicted RBP18.34■□□□□ 0.53
APH1A-208ENST00000486720 ITGA6P23229 1130 aa18.34■□□□□ 0.53
APH1A-208ENST00000486720 RPS8P62241 208 aaKnown RBP18.34■□□□□ 0.53
APH1A-208ENST00000486720 GPR162Q16538 588 aa18.34■□□□□ 0.53
APH1A-208ENST00000486720 ANKRD18AQ8IVF6 992 aa18.34■□□□□ 0.53
APH1A-208ENST00000486720 ANKRD44Q8N8A2 993 aa18.34■□□□□ 0.53
APH1A-208ENST00000486720 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
APH1A-208ENST00000486720 IGHMBP2P38935 993 aaKnown RBP18.33■□□□□ 0.52
APH1A-208ENST00000486720 CC2D2BQ6DHV5 1058 aa18.33■□□□□ 0.52
APH1A-208ENST00000486720 CELF1Q92879 486 aaKnown RBP18.33■□□□□ 0.52
APH1A-208ENST00000486720 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
APH1A-208ENST00000486720 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
APH1A-208ENST00000486720 GRIPAP1Q4V328 841 aa18.32■□□□□ 0.52
APH1A-208ENST00000486720 TAF7LQ5H9L4 462 aa18.32■□□□□ 0.52
APH1A-208ENST00000486720 MTX1Q13505 466 aa18.31■□□□□ 0.52
APH1A-208ENST00000486720 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
APH1A-208ENST00000486720 ZBTB40Q9NUA8 1239 aa18.31■□□□□ 0.52
APH1A-208ENST00000486720 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
APH1A-208ENST00000486720 C21orf2O43822 256 aa18.3■□□□□ 0.52
APH1A-208ENST00000486720 YBX3P16989 372 aaKnown RBP eCLIP18.3■□□□□ 0.521e-9■■□□□ 11.9
APH1A-208ENST00000486720 CCDC93Q567U6 631 aa18.3■□□□□ 0.52
APH1A-208ENST00000486720 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
APH1A-208ENST00000486720 MPHOSPH8Q99549 860 aa18.3■□□□□ 0.52
APH1A-208ENST00000486720 SLX4Q8IY92 1834 aa18.29■□□□□ 0.52
APH1A-208ENST00000486720 ARFGEF1Q9Y6D6 1849 aa18.29■□□□□ 0.52
APH1A-208ENST00000486720 BSDC1Q9NW68 430 aaPredicted RBP18.29■□□□□ 0.52
APH1A-208ENST00000486720 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
APH1A-208ENST00000486720 SRGAP3O43295 1099 aa18.28■□□□□ 0.52
APH1A-208ENST00000486720 AAMPQ13685 434 aa18.28■□□□□ 0.52
APH1A-208ENST00000486720 RTKN2Q8IZC4 609 aa18.28■□□□□ 0.52
APH1A-208ENST00000486720 CRBNQ96SW2 442 aa18.28■□□□□ 0.52
APH1A-208ENST00000486720 C1orf115Q9H7X2 142 aa18.28■□□□□ 0.52
APH1A-208ENST00000486720 CACNA1SQ13698 1873 aa18.27■□□□□ 0.52
APH1A-208ENST00000486720 ATP8B2P98198 1209 aa18.27■□□□□ 0.52
APH1A-208ENST00000486720 LDHAL6AQ6ZMR3 332 aa18.27■□□□□ 0.52
APH1A-208ENST00000486720 RPAP2Q8IXW5 612 aaPredicted RBP18.27■□□□□ 0.52
APH1A-208ENST00000486720 FBXO3Q9UK99 471 aa18.26■□□□□ 0.51
APH1A-208ENST00000486720 RFX5P48382 616 aaPredicted RBP18.25■□□□□ 0.51
APH1A-208ENST00000486720 CEP85Q6P2H3 762 aa18.25■□□□□ 0.51
APH1A-208ENST00000486720 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
APH1A-208ENST00000486720 MPNDQ8N594 471 aa18.25■□□□□ 0.51
APH1A-208ENST00000486720 ZNF594Q96JF6 807 aaPredicted RBP18.25■□□□□ 0.51
APH1A-208ENST00000486720 CNNM1Q9NRU3 951 aa18.25■□□□□ 0.51
APH1A-208ENST00000486720 LRRC37AA6NMS7 1700 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 HMMRO75330 724 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 PTPN12Q05209 780 aaKnown RBP18.24■□□□□ 0.51
APH1A-208ENST00000486720 DPP8Q6V1X1 898 aaPredicted RBP18.24■□□□□ 0.51
APH1A-208ENST00000486720 SUPT20HQ8NEM7 779 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 SSH3Q8TE77 659 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 ANKRD2Q9GZV1 360 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 TAOK3Q9H2K8 898 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 COPRSQ9NQ92 184 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 MINPP1Q9UNW1 487 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 COL4A1P02462 1669 aa18.24■□□□□ 0.51
APH1A-208ENST00000486720 LTBP3Q9NS15 1303 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms