RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 ZNF541Q9H0D2 1346 aa23.43■■□□□ 1.34
CLDN11-206ENST00000486429 HSPA6P17066 643 aa23.43■■□□□ 1.34
CLDN11-206ENST00000486429 FKBP5Q13451 457 aaPredicted RBP23.43■■□□□ 1.34
CLDN11-206ENST00000486429 TMC4Q7Z404 712 aa23.43■■□□□ 1.34
CLDN11-206ENST00000486429 JDP2Q8WYK2 163 aa23.43■■□□□ 1.34
CLDN11-206ENST00000486429 TAF1P21675 1872 aa23.43■■□□□ 1.34
CLDN11-206ENST00000486429 COL4A5P29400 1685 aa23.42■■□□□ 1.34
CLDN11-206ENST00000486429 DDNO94850 711 aaPredicted RBP23.42■■□□□ 1.34
CLDN11-206ENST00000486429 IGKV5-2P06315 115 aa23.42■■□□□ 1.34
CLDN11-206ENST00000486429 SP8Q8IXZ3 490 aa23.42■■□□□ 1.34
CLDN11-206ENST00000486429 DPP8Q6V1X1 898 aaPredicted RBP23.41■■□□□ 1.34
CLDN11-206ENST00000486429 LARGE2Q8N3Y3 721 aa23.41■■□□□ 1.34
CLDN11-206ENST00000486429 CDHR2Q9BYE9 1310 aa23.4■■□□□ 1.34
CLDN11-206ENST00000486429 SUPT20HQ8NEM7 779 aa23.4■■□□□ 1.34
CLDN11-206ENST00000486429 COL4A1P02462 1669 aa23.4■■□□□ 1.34
CLDN11-206ENST00000486429 NEURL1BA8MQ27 555 aa23.39■■□□□ 1.33
CLDN11-206ENST00000486429 PPIP5K2O43314 1243 aa23.39■■□□□ 1.33
CLDN11-206ENST00000486429 PDE8AO60658 829 aa23.39■■□□□ 1.33
CLDN11-206ENST00000486429 FSTL1Q12841 308 aa23.39■■□□□ 1.33
CLDN11-206ENST00000486429 CWF19L2Q2TBE0 894 aaKnown RBP23.39■■□□□ 1.33
CLDN11-206ENST00000486429 MPNDQ8N594 471 aa23.39■■□□□ 1.33
CLDN11-206ENST00000486429 DNAAF4Q8WXU2 420 aa23.39■■□□□ 1.33
CLDN11-206ENST00000486429 JARID2Q92833 1246 aaPredicted RBP23.39■■□□□ 1.33
CLDN11-206ENST00000486429 CELF1Q92879 486 aaKnown RBP23.39■■□□□ 1.33
CLDN11-206ENST00000486429 DUOX1Q9NRD9 1551 aa23.39■■□□□ 1.33
CLDN11-206ENST00000486429 POTECB2RU33 542 aa23.38■■□□□ 1.33
CLDN11-206ENST00000486429 E9PSI1 815 aa23.38■■□□□ 1.33
CLDN11-206ENST00000486429 FZD9O00144 591 aa23.38■■□□□ 1.33
CLDN11-206ENST00000486429 CCDC152Q4G0S7 254 aa23.38■■□□□ 1.33
CLDN11-206ENST00000486429 SMC1BQ8NDV3 1235 aa23.38■■□□□ 1.33
CLDN11-206ENST00000486429 L3MBTL3Q96JM7 780 aaPredicted RBP23.38■■□□□ 1.33
CLDN11-206ENST00000486429 RTFDC1Q9BY42 306 aaPredicted RBP23.38■■□□□ 1.33
CLDN11-206ENST00000486429 NIM1KQ8IY84 436 aa23.37■■□□□ 1.33
CLDN11-206ENST00000486429 SCN4AP35499 1836 aa23.37■■□□□ 1.33
CLDN11-206ENST00000486429 IQCA1LA6NCM1 817 aa23.36■■□□□ 1.33
CLDN11-206ENST00000486429 EIF6P56537 245 aaKnown RBP23.36■■□□□ 1.33
CLDN11-206ENST00000486429 AOC3Q16853 763 aa23.36■■□□□ 1.33
CLDN11-206ENST00000486429 VPS33BQ9H267 617 aa23.36■■□□□ 1.33
CLDN11-206ENST00000486429 MYH3P11055 1940 aa23.35■■□□□ 1.33
CLDN11-206ENST00000486429 GPC2Q8N158 579 aa23.35■■□□□ 1.33
CLDN11-206ENST00000486429 LINS1Q8NG48 757 aa23.35■■□□□ 1.33
CLDN11-206ENST00000486429 CTSWP56202 376 aa23.34■■□□□ 1.33
CLDN11-206ENST00000486429 RPS8P62241 208 aaKnown RBP23.34■■□□□ 1.33
CLDN11-206ENST00000486429 UBE3BQ7Z3V4 1068 aa23.34■■□□□ 1.33
CLDN11-206ENST00000486429 CCDC85AQ96PX6 553 aaPredicted RBP23.34■■□□□ 1.33
CLDN11-206ENST00000486429 SEC31BQ9NQW1 1179 aa23.34■■□□□ 1.33
CLDN11-206ENST00000486429 LTBP1Q14766 1721 aa23.33■■□□□ 1.33
CLDN11-206ENST00000486429 GCKRQ14397 625 aa23.33■■□□□ 1.33
CLDN11-206ENST00000486429 APLP1P51693 650 aa23.32■■□□□ 1.32
CLDN11-206ENST00000486429 SLFN5Q08AF3 891 aa23.32■■□□□ 1.32
CLDN11-206ENST00000486429 KIAA2012Q0VF49 1180 aa23.32■■□□□ 1.32
CLDN11-206ENST00000486429 NSFL1CQ9UNZ2 370 aaKnown RBP23.32■■□□□ 1.32
CLDN11-206ENST00000486429 F6X3S4 739 aa23.31■■□□□ 1.32
CLDN11-206ENST00000486429 H7C1W4 665 aa23.31■■□□□ 1.32
CLDN11-206ENST00000486429 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
CLDN11-206ENST00000486429 HACL1Q9UJ83 578 aa23.31■■□□□ 1.32
CLDN11-206ENST00000486429 GJA3Q9Y6H8 435 aa23.31■■□□□ 1.32
CLDN11-206ENST00000486429 RTL9Q8NET4 1388 aa23.3■■□□□ 1.32
CLDN11-206ENST00000486429 TAF1DQ9H5J8 278 aaPredicted RBP23.3■■□□□ 1.32
CLDN11-206ENST00000486429 ZNRF3Q9ULT6 936 aa23.3■■□□□ 1.32
CLDN11-206ENST00000486429 GPSM2P81274 684 aa23.29■■□□□ 1.32
CLDN11-206ENST00000486429 ANKRD18AQ8IVF6 992 aa23.29■■□□□ 1.32
CLDN11-206ENST00000486429 CDC5LQ99459 802 aaKnown RBP23.29■■□□□ 1.32
CLDN11-206ENST00000486429 CEP350Q5VT06 3117 aa23.29■■□□□ 1.32
CLDN11-206ENST00000486429 BEND3Q5T5X7 828 aa23.28■■□□□ 1.32
CLDN11-206ENST00000486429 TTLL11Q8NHH1 800 aa23.28■■□□□ 1.32
CLDN11-206ENST00000486429 SPEF2Q9C093 1822 aa23.27■■□□□ 1.32
CLDN11-206ENST00000486429 C6orf229H3BNL8 230 aa23.27■■□□□ 1.32
CLDN11-206ENST00000486429 LMOD1P29536 600 aaPredicted RBP23.27■■□□□ 1.32
CLDN11-206ENST00000486429 EPHX2P34913 555 aa23.27■■□□□ 1.32
CLDN11-206ENST00000486429 CASP7P55210 303 aa23.27■■□□□ 1.32
CLDN11-206ENST00000486429 CHADLQ6NUI6 762 aa23.27■■□□□ 1.32
CLDN11-206ENST00000486429 CDCA7LQ96GN5 454 aa23.27■■□□□ 1.32
CLDN11-206ENST00000486429 PLA2G12BQ9BX93 195 aa23.27■■□□□ 1.32
CLDN11-206ENST00000486429 GREM2Q9H772 168 aa23.27■■□□□ 1.32
CLDN11-206ENST00000486429 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
CLDN11-206ENST00000486429 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
CLDN11-206ENST00000486429 WASHC4Q2M389 1173 aa23.26■■□□□ 1.31
CLDN11-206ENST00000486429 LDHDQ86WU2 507 aa23.26■■□□□ 1.31
CLDN11-206ENST00000486429 EYA3Q99504 573 aa23.26■■□□□ 1.31
CLDN11-206ENST00000486429 ADAMTSL1Q8N6G6 1762 aa23.25■■□□□ 1.31
CLDN11-206ENST00000486429 EAPPQ56P03 285 aaPredicted RBP23.25■■□□□ 1.31
CLDN11-206ENST00000486429 TBC1D16Q8TBP0 767 aa23.25■■□□□ 1.31
CLDN11-206ENST00000486429 PODXL2Q9NZ53 605 aa23.25■■□□□ 1.31
CLDN11-206ENST00000486429 ANKIB1Q9P2G1 1089 aa23.25■■□□□ 1.31
CLDN11-206ENST00000486429 POLLQ9UGP5 575 aa23.25■■□□□ 1.31
CLDN11-206ENST00000486429 UFL1O94874 794 aa23.24■■□□□ 1.31
CLDN11-206ENST00000486429 SCNN1DP51172 638 aa23.24■■□□□ 1.31
CLDN11-206ENST00000486429 CXCL9Q07325 125 aa23.24■■□□□ 1.31
CLDN11-206ENST00000486429 SLC4A10Q6U841 1118 aa23.24■■□□□ 1.31
CLDN11-206ENST00000486429 PNMA8AQ86V59 439 aaPredicted RBP23.24■■□□□ 1.31
CLDN11-206ENST00000486429 MIER1Q8N108 512 aa23.24■■□□□ 1.31
CLDN11-206ENST00000486429 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
CLDN11-206ENST00000486429 FAM161AQ3B820 660 aa23.23■■□□□ 1.31
CLDN11-206ENST00000486429 CIAPIN1Q6FI81 312 aa23.23■■□□□ 1.31
CLDN11-206ENST00000486429 SSH1Q8WYL5 1049 aa23.23■■□□□ 1.31
CLDN11-206ENST00000486429 GGA1Q9UJY5 639 aa23.23■■□□□ 1.31
CLDN11-206ENST00000486429 XDHP47989 1333 aa23.23■■□□□ 1.31
CLDN11-206ENST00000486429 RIMBP2O15034 1052 aa23.22■■□□□ 1.31
CLDN11-206ENST00000486429 ALDH1L1O75891 902 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms