RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ADAMTSL1Q8N6G6 1762 aa29.03■■■□□ 2.24
SREBF1-214ENST00000486311 GOLGA2Q08379 1002 aa29.02■■■□□ 2.24
SREBF1-214ENST00000486311 CCDC184Q52MB2 194 aa29.02■■■□□ 2.24
SREBF1-214ENST00000486311 C8orf58Q8NAV2 365 aa29.02■■■□□ 2.24
SREBF1-214ENST00000486311 PHAXQ9H814 394 aaKnown RBP29.01■■■□□ 2.23
SREBF1-214ENST00000486311 ZNRF3Q9ULT6 936 aa29.01■■■□□ 2.23
SREBF1-214ENST00000486311 KIAA2012Q0VF49 1180 aa29■■■□□ 2.23
SREBF1-214ENST00000486311 MAP1SQ66K74 1059 aaPredicted RBP29■■■□□ 2.23
SREBF1-214ENST00000486311 RIC3Q7Z5B4 369 aa29■■■□□ 2.23
SREBF1-214ENST00000486311 CNTROBQ8N137 903 aa29■■■□□ 2.23
SREBF1-214ENST00000486311 MKRN1Q9UHC7 482 aaKnown RBP29■■■□□ 2.23
SREBF1-214ENST00000486311 LAMB2P55268 1798 aa28.99■■■□□ 2.23
SREBF1-214ENST00000486311 TMEM88BA6NKF7 163 aa28.99■■■□□ 2.23
SREBF1-214ENST00000486311 EPS15P42566 896 aa28.99■■■□□ 2.23
SREBF1-214ENST00000486311 CHMP4AQ9BY43 222 aa28.99■■■□□ 2.23
SREBF1-214ENST00000486311 HSPA1AP0DMV8 641 aaKnown RBP28.98■■■□□ 2.23
SREBF1-214ENST00000486311 HSPA1BP0DMV9 641 aaKnown RBP28.98■■■□□ 2.23
SREBF1-214ENST00000486311 CXCL9Q07325 125 aa28.98■■■□□ 2.23
SREBF1-214ENST00000486311 CNTNAP1P78357 1384 aa28.98■■■□□ 2.23
SREBF1-214ENST00000486311 IRS4O14654 1257 aaPredicted RBP28.97■■■□□ 2.23
SREBF1-214ENST00000486311 LTBP1Q14766 1721 aa28.97■■■□□ 2.23
SREBF1-214ENST00000486311 CCDC27Q2M243 656 aa28.96■■■□□ 2.23
SREBF1-214ENST00000486311 RTL5Q5HYW3 569 aaPredicted RBP28.96■■■□□ 2.23
SREBF1-214ENST00000486311 CCDC30Q5VVM6 783 aa28.96■■■□□ 2.23
SREBF1-214ENST00000486311 USP50Q70EL3 339 aaPredicted RBP28.96■■■□□ 2.23
SREBF1-214ENST00000486311 ZBTB38Q8NAP3 1195 aaPredicted RBP28.96■■■□□ 2.23
SREBF1-214ENST00000486311 CELF1Q92879 486 aaKnown RBP28.96■■■□□ 2.23
SREBF1-214ENST00000486311 MYD88Q99836 296 aa28.94■■■□□ 2.22
SREBF1-214ENST00000486311 GPRC5DQ9NZD1 345 aa28.94■■■□□ 2.22
SREBF1-214ENST00000486311 DDX60Q8IY21 1712 aaKnown RBP28.94■■■□□ 2.22
SREBF1-214ENST00000486311 CIAPIN1Q6FI81 312 aa28.93■■■□□ 2.22
SREBF1-214ENST00000486311 TSPYL6Q8N831 410 aa28.93■■■□□ 2.22
SREBF1-214ENST00000486311 CCDC191Q8NCU4 936 aa28.93■■■□□ 2.22
SREBF1-214ENST00000486311 HSP90B1P14625 803 aaKnown RBP28.92■■■□□ 2.22
SREBF1-214ENST00000486311 ADARB2Q9NS39 739 aaKnown RBP28.92■■■□□ 2.22
SREBF1-214ENST00000486311 DUOX1Q9NRD9 1551 aa28.92■■■□□ 2.22
SREBF1-214ENST00000486311 DDX58O95786 925 aaKnown RBP28.91■■■□□ 2.22
SREBF1-214ENST00000486311 GMPSP49915 693 aaPredicted RBP28.91■■■□□ 2.22
SREBF1-214ENST00000486311 WWC1Q8IX03 1113 aa28.91■■■□□ 2.22
SREBF1-214ENST00000486311 TNS4Q8IZW8 715 aa28.91■■■□□ 2.22
SREBF1-214ENST00000486311 TSR2Q969E8 191 aaKnown RBP28.91■■■□□ 2.22
SREBF1-214ENST00000486311 NSFL1CQ9UNZ2 370 aaKnown RBP28.91■■■□□ 2.22
SREBF1-214ENST00000486311 TNIP1Q15025 636 aa28.9■■■□□ 2.22
SREBF1-214ENST00000486311 METTL22Q9BUU2 404 aaPredicted RBP28.9■■■□□ 2.22
SREBF1-214ENST00000486311 CDHR2Q9BYE9 1310 aa28.9■■■□□ 2.22
SREBF1-214ENST00000486311 LRRC37AA6NMS7 1700 aa28.89■■■□□ 2.22
SREBF1-214ENST00000486311 RAD17O75943 681 aa28.89■■■□□ 2.22
SREBF1-214ENST00000486311 PCCAP05165 728 aaPredicted RBP28.89■■■□□ 2.22
SREBF1-214ENST00000486311 RPS8P62241 208 aaKnown RBP28.89■■■□□ 2.22
SREBF1-214ENST00000486311 NCBP3Q53F19 620 aaKnown RBP28.89■■■□□ 2.22
SREBF1-214ENST00000486311 CWC25Q9NXE8 425 aaPredicted RBP28.89■■■□□ 2.22
SREBF1-214ENST00000486311 YDJCA8MPS7 323 aa28.88■■■□□ 2.21
SREBF1-214ENST00000486311 VEGFBP49765 207 aa28.88■■■□□ 2.21
SREBF1-214ENST00000486311 GPSM2P81274 684 aa28.88■■■□□ 2.21
SREBF1-214ENST00000486311 WASHC4Q2M389 1173 aa28.88■■■□□ 2.21
SREBF1-214ENST00000486311 RASSF10A6NK89 507 aa28.87■■■□□ 2.21
SREBF1-214ENST00000486311 POLLQ9UGP5 575 aa28.87■■■□□ 2.21
SREBF1-214ENST00000486311 BCL2L13Q9BXK5 485 aa28.86■■■□□ 2.21
SREBF1-214ENST00000486311 MRS2Q9HD23 443 aa28.86■■■□□ 2.21
SREBF1-214ENST00000486311 MAP3K2Q9Y2U5 619 aa28.86■■■□□ 2.21
SREBF1-214ENST00000486311 IL16Q14005 1332 aa28.86■■■□□ 2.21
SREBF1-214ENST00000486311 COL4A1P02462 1669 aa28.86■■■□□ 2.21
SREBF1-214ENST00000486311 TAF1P21675 1872 aa28.85■■■□□ 2.21
SREBF1-214ENST00000486311 C6orf229H3BNL8 230 aa28.85■■■□□ 2.21
SREBF1-214ENST00000486311 KSR2Q6VAB6 950 aa28.85■■■□□ 2.21
SREBF1-214ENST00000486311 SEC31BQ9NQW1 1179 aa28.85■■■□□ 2.21
SREBF1-214ENST00000486311 PDE8AO60658 829 aa28.84■■■□□ 2.21
SREBF1-214ENST00000486311 DEFB115Q30KQ5 88 aa28.84■■■□□ 2.21
SREBF1-214ENST00000486311 CCDC152Q4G0S7 254 aa28.84■■■□□ 2.21
SREBF1-214ENST00000486311 STK31Q9BXU1 1019 aa28.84■■■□□ 2.21
SREBF1-214ENST00000486311 PI4KAP2A4QPH2 592 aa28.83■■■□□ 2.21
SREBF1-214ENST00000486311 TWISTNBQ3B726 338 aaPredicted RBP28.83■■■□□ 2.21
SREBF1-214ENST00000486311 PI4KAP1Q8N8J0 262 aa28.83■■■□□ 2.21
SREBF1-214ENST00000486311 TBC1D16Q8TBP0 767 aa28.83■■■□□ 2.21
SREBF1-214ENST00000486311 JARID2Q92833 1246 aaPredicted RBP28.83■■■□□ 2.21
SREBF1-214ENST00000486311 EYA3Q99504 573 aa28.83■■■□□ 2.21
SREBF1-214ENST00000486311 ZNF316A6NFI3 1004 aaPredicted RBP28.82■■■□□ 2.2
SREBF1-214ENST00000486311 RIMBP2O15034 1052 aa28.82■■■□□ 2.2
SREBF1-214ENST00000486311 ANP32CO43423 234 aa28.82■■■□□ 2.2
SREBF1-214ENST00000486311 FMR1Q06787 632 aaKnown RBP eCLIP28.82■■■□□ 2.2
SREBF1-214ENST00000486311 DBNDD1Q9H9R9 158 aa28.82■■■□□ 2.2
SREBF1-214ENST00000486311 PODXL2Q9NZ53 605 aa28.82■■■□□ 2.2
SREBF1-214ENST00000486311 PGAP2Q9UHJ9 254 aa28.82■■■□□ 2.2
SREBF1-214ENST00000486311 ABT1Q9ULW3 272 aaKnown RBP28.82■■■□□ 2.2
SREBF1-214ENST00000486311 TRAF5O00463 557 aa28.81■■■□□ 2.2
SREBF1-214ENST00000486311 CAPN15O75808 1086 aa28.81■■■□□ 2.2
SREBF1-214ENST00000486311 IGKV5-2P06315 115 aa28.81■■■□□ 2.2
SREBF1-214ENST00000486311 CNOT7Q9UIV1 285 aaKnown RBP28.81■■■□□ 2.2
SREBF1-214ENST00000486311 ZC3H15Q8WU90 426 aaKnown RBP28.8■■■□□ 2.2
SREBF1-214ENST00000486311 DPF2Q92785 391 aa28.8■■■□□ 2.2
SREBF1-214ENST00000486311 PSMD14O00487 310 aa28.79■■■□□ 2.2
SREBF1-214ENST00000486311 HIRAP54198 1017 aaPredicted RBP28.79■■■□□ 2.2
SREBF1-214ENST00000486311 CST9Q5W186 159 aa28.79■■■□□ 2.2
SREBF1-214ENST00000486311 H7C1D1 291 aa28.78■■■□□ 2.2
SREBF1-214ENST00000486311 ECE2O60344 883 aa28.78■■■□□ 2.2
SREBF1-214ENST00000486311 NEXNQ0ZGT2 675 aa28.78■■■□□ 2.2
SREBF1-214ENST00000486311 TRPM4Q8TD43 1214 aa28.78■■■□□ 2.2
SREBF1-214ENST00000486311 GPR101Q96P66 508 aaPredicted RBP28.78■■■□□ 2.2
SREBF1-214ENST00000486311 CCDC85AQ96PX6 553 aaPredicted RBP28.78■■■□□ 2.2
SREBF1-214ENST00000486311 ZBTB12Q9Y330 459 aaPredicted RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms