RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 FER1L6Q2WGJ9 1857 aa9.43□□□□□ -0.9
APH1A-207ENST00000486308 LTBP3Q9NS15 1303 aa9.43□□□□□ -0.9
APH1A-207ENST00000486308 GRM8O00222 908 aa9.43□□□□□ -0.9
APH1A-207ENST00000486308 CTSWP56202 376 aa9.43□□□□□ -0.9
APH1A-207ENST00000486308 GRAPQ13588 217 aa9.43□□□□□ -0.9
APH1A-207ENST00000486308 SOGA3Q5TF21 947 aa9.43□□□□□ -0.9
APH1A-207ENST00000486308 GRAPLQ8TC17 118 aaPredicted RBP9.43□□□□□ -0.9
APH1A-207ENST00000486308 PLA2G12BQ9BX93 195 aa9.43□□□□□ -0.9
APH1A-207ENST00000486308 UTYO14607 1347 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 BBOX1O75936 387 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 CCDC152Q4G0S7 254 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 TTLL11Q8NHH1 800 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 ARHGAP45Q92619 1136 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 CELF1Q92879 486 aaKnown RBP9.42□□□□□ -0.9
APH1A-207ENST00000486308 API5Q9BZZ5 524 aaKnown RBP9.42□□□□□ -0.9
APH1A-207ENST00000486308 TAOK3Q9H2K8 898 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 SEC31BQ9NQW1 1179 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 ATP6V0A2Q9Y487 856 aa9.42□□□□□ -0.9
APH1A-207ENST00000486308 RTL9Q8NET4 1388 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 TAF1P21675 1872 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 CSF1RP07333 972 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 LMNB1P20700 586 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 FOXO4P98177 505 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 FKBP4Q02790 459 aaKnown RBP eCLIP9.41□□□□□ -0.9
APH1A-207ENST00000486308 CC2D2BQ6DHV5 1058 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 RTKN2Q8IZC4 609 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
APH1A-207ENST00000486308 GREM2Q9H772 168 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 RNF181Q9P0P0 153 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 TNNQ9UQP3 1299 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 LRRC37AA6NMS7 1700 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 MYH3P11055 1940 aa9.41□□□□□ -0.9
APH1A-207ENST00000486308 SBF1O95248 1867 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 NBPF7P0C2Y1 421 aaPredicted RBP9.4□□□□□ -0.9
APH1A-207ENST00000486308 TRIM27P14373 513 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 CCT4P50991 539 aaKnown RBP9.4□□□□□ -0.9
APH1A-207ENST00000486308 RPS8P62241 208 aaKnown RBP9.4□□□□□ -0.9
APH1A-207ENST00000486308 EPHA10Q5JZY3 1008 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 ATF7IPQ6VMQ6 1270 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 TMC4Q7Z404 712 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 SP8Q8IXZ3 490 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.9
APH1A-207ENST00000486308 KAZALD1Q96I82 304 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 SUCLG2Q96I99 432 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 PSMD1Q99460 953 aa9.4□□□□□ -0.9
APH1A-207ENST00000486308 C9orf78Q9NZ63 289 aaPredicted RBP9.4□□□□□ -0.9
APH1A-207ENST00000486308 DUOX1Q9NRD9 1551 aa9.39□□□□□ -0.91
APH1A-207ENST00000486308 IPO8O15397 1037 aaKnown RBP9.39□□□□□ -0.91
APH1A-207ENST00000486308 FAM161AQ3B820 660 aa9.39□□□□□ -0.91
APH1A-207ENST00000486308 GRIPAP1Q4V328 841 aa9.39□□□□□ -0.91
APH1A-207ENST00000486308 ZKSCAN2Q63HK3 967 aa9.39□□□□□ -0.91
APH1A-207ENST00000486308 INTS3Q68E01 1043 aaKnown RBP9.39□□□□□ -0.91
APH1A-207ENST00000486308 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
APH1A-207ENST00000486308 YTHDC1Q96MU7 727 aaKnown RBP9.39□□□□□ -0.91
APH1A-207ENST00000486308 CDC5LQ99459 802 aaKnown RBP9.39□□□□□ -0.91
APH1A-207ENST00000486308 USP44Q9H0E7 712 aa9.39□□□□□ -0.91
APH1A-207ENST00000486308 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
APH1A-207ENST00000486308 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
APH1A-207ENST00000486308 ITGA6P23229 1130 aa9.38□□□□□ -0.91
APH1A-207ENST00000486308 LMBR1LQ6UX01 489 aa9.38□□□□□ -0.91
APH1A-207ENST00000486308 ANKRD18AQ8IVF6 992 aa9.38□□□□□ -0.91
APH1A-207ENST00000486308 RTFDC1Q9BY42 306 aaPredicted RBP9.38□□□□□ -0.91
APH1A-207ENST00000486308 BICC1Q9H694 974 aaKnown RBP9.38□□□□□ -0.91
APH1A-207ENST00000486308 LTBP1Q14766 1721 aa9.38□□□□□ -0.91
APH1A-207ENST00000486308 TIAM2Q8IVF5 1701 aa9.38□□□□□ -0.91
APH1A-207ENST00000486308 COL4A5P29400 1685 aa9.38□□□□□ -0.91
APH1A-207ENST00000486308 IARSP41252 1262 aaKnown RBP9.37□□□□□ -0.91
APH1A-207ENST00000486308 GPSM2P81274 684 aa9.37□□□□□ -0.91
APH1A-207ENST00000486308 RABL6Q3YEC7 729 aaPredicted RBP9.37□□□□□ -0.91
APH1A-207ENST00000486308 DPP8Q6V1X1 898 aaPredicted RBP9.37□□□□□ -0.91
APH1A-207ENST00000486308 MPNDQ8N594 471 aa9.37□□□□□ -0.91
APH1A-207ENST00000486308 ANKRD44Q8N8A2 993 aa9.37□□□□□ -0.91
APH1A-207ENST00000486308 CLUAP1Q96AJ1 413 aa9.37□□□□□ -0.91
APH1A-207ENST00000486308 TMX4Q9H1E5 349 aaPredicted RBP9.37□□□□□ -0.91
APH1A-207ENST00000486308 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
APH1A-207ENST00000486308 DICER1Q9UPY3 1922 aaKnown RBP9.37□□□□□ -0.91
APH1A-207ENST00000486308 ANKRD18BA2A2Z9 1011 aa9.36□□□□□ -0.91
APH1A-207ENST00000486308 RLBP1P12271 317 aa9.36□□□□□ -0.91
APH1A-207ENST00000486308 MEIS3Q99687 375 aa9.36□□□□□ -0.91
APH1A-207ENST00000486308 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
APH1A-207ENST00000486308 RCAN3Q9UKA8 241 aa9.36□□□□□ -0.91
APH1A-207ENST00000486308 CHMP3Q9Y3E7 222 aa9.36□□□□□ -0.91
APH1A-207ENST00000486308 CCDC88AQ3V6T2 1871 aa9.36□□□□□ -0.91
APH1A-207ENST00000486308 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 UBTFL1P0CB47 393 aaPredicted RBP9.35□□□□□ -0.91
APH1A-207ENST00000486308 IGHMBP2P38935 993 aaKnown RBP9.35□□□□□ -0.91
APH1A-207ENST00000486308 KIAA2012Q0VF49 1180 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 IFIT5Q13325 482 aaKnown RBP9.35□□□□□ -0.91
APH1A-207ENST00000486308 AOC3Q16853 763 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 TMEM57Q8N5G2 664 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 SUPT20HQ8NEM7 779 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 TBC1D16Q8TBP0 767 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 ZNF526Q8TF50 670 aaPredicted RBP9.35□□□□□ -0.91
APH1A-207ENST00000486308 VPS33BQ9H267 617 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 POLLQ9UGP5 575 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 MINPP1Q9UNW1 487 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 NSFL1CQ9UNZ2 370 aaKnown RBP9.35□□□□□ -0.91
APH1A-207ENST00000486308 SPEF2Q9C093 1822 aa9.35□□□□□ -0.91
APH1A-207ENST00000486308 XDHP47989 1333 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms