RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 NIM1KQ8IY84 436 aa28.22■■■□□ 2.11
HLA-F-228ENST00000486194 MPNDQ8N594 471 aa28.22■■■□□ 2.11
HLA-F-228ENST00000486194 RTFDC1Q9BY42 306 aaPredicted RBP28.22■■■□□ 2.11
HLA-F-228ENST00000486194 CWC25Q9NXE8 425 aaPredicted RBP28.22■■■□□ 2.11
HLA-F-228ENST00000486194 PPIP5K2O43314 1243 aa28.21■■■□□ 2.11
HLA-F-228ENST00000486194 HACL1Q9UJ83 578 aa28.21■■■□□ 2.11
HLA-F-228ENST00000486194 MAP3K2Q9Y2U5 619 aa28.21■■■□□ 2.11
HLA-F-228ENST00000486194 PCCAP05165 728 aaPredicted RBP28.2■■■□□ 2.1
HLA-F-228ENST00000486194 NEXNQ0ZGT2 675 aa28.2■■■□□ 2.1
HLA-F-228ENST00000486194 TAF1DQ9H5J8 278 aaPredicted RBP28.2■■■□□ 2.1
HLA-F-228ENST00000486194 DDX60Q8IY21 1712 aaKnown RBP28.2■■■□□ 2.1
HLA-F-228ENST00000486194 SCN4AP35499 1836 aa28.2■■■□□ 2.1
HLA-F-228ENST00000486194 CHADLQ6NUI6 762 aa28.19■■■□□ 2.1
HLA-F-228ENST00000486194 PI4KAP2A4QPH2 592 aa28.18■■■□□ 2.1
HLA-F-228ENST00000486194 SLC4A2P04920 1241 aa28.18■■■□□ 2.1
HLA-F-228ENST00000486194 PI4KAP1Q8N8J0 262 aa28.18■■■□□ 2.1
HLA-F-228ENST00000486194 AOC3Q16853 763 aa28.17■■■□□ 2.1
HLA-F-228ENST00000486194 SLC51AQ86UW1 340 aa28.17■■■□□ 2.1
HLA-F-228ENST00000486194 LDHDQ86WU2 507 aa28.17■■■□□ 2.1
HLA-F-228ENST00000486194 MYH16Q9H6N6 1097 aa28.17■■■□□ 2.1
HLA-F-228ENST00000486194 PNMA8AQ86V59 439 aaPredicted RBP28.16■■■□□ 2.1
HLA-F-228ENST00000486194 DNAJC5GQ8N7S2 189 aa28.16■■■□□ 2.1
HLA-F-228ENST00000486194 PDE8AO60658 829 aa28.15■■■□□ 2.1
HLA-F-228ENST00000486194 EPHX2P34913 555 aa28.15■■■□□ 2.1
HLA-F-228ENST00000486194 CCDC152Q4G0S7 254 aa28.15■■■□□ 2.1
HLA-F-228ENST00000486194 GJA3Q9Y6H8 435 aa28.15■■■□□ 2.1
HLA-F-228ENST00000486194 COL4A5P29400 1685 aa28.14■■■□□ 2.1
HLA-F-228ENST00000486194 LMOD1P29536 600 aaPredicted RBP28.14■■■□□ 2.1
HLA-F-228ENST00000486194 KIAA2012Q0VF49 1180 aa28.14■■■□□ 2.1
HLA-F-228ENST00000486194 CELF1Q92879 486 aaKnown RBP28.14■■■□□ 2.1
HLA-F-228ENST00000486194 CEP350Q5VT06 3117 aa28.14■■■□□ 2.1
HLA-F-228ENST00000486194 VAMP4O75379 141 aa28.13■■■□□ 2.09
HLA-F-228ENST00000486194 RPS8P62241 208 aaKnown RBP28.13■■■□□ 2.09
HLA-F-228ENST00000486194 EXOSC9Q06265 439 aaKnown RBP28.13■■■□□ 2.09
HLA-F-228ENST00000486194 ZNRF3Q9ULT6 936 aa28.13■■■□□ 2.09
HLA-F-228ENST00000486194 CDHR2Q9BYE9 1310 aa28.13■■■□□ 2.09
HLA-F-228ENST00000486194 FLIIQ13045 1269 aa28.12■■■□□ 2.09
HLA-F-228ENST00000486194 EAPPQ56P03 285 aaPredicted RBP28.12■■■□□ 2.09
HLA-F-228ENST00000486194 IGKV5-2P06315 115 aa28.11■■■□□ 2.09
HLA-F-228ENST00000486194 POTEIP0CG38 1075 aa28.11■■■□□ 2.09
HLA-F-228ENST00000486194 POTEJP0CG39 1038 aa28.11■■■□□ 2.09
HLA-F-228ENST00000486194 G2E3Q7L622 706 aa28.11■■■□□ 2.09
HLA-F-228ENST00000486194 NSFL1CQ9UNZ2 370 aaKnown RBP28.11■■■□□ 2.09
HLA-F-228ENST00000486194 LRRC37AA6NMS7 1700 aa28.1■■■□□ 2.09
HLA-F-228ENST00000486194 HTRA3P83110 453 aa28.1■■■□□ 2.09
HLA-F-228ENST00000486194 FKBP5Q13451 457 aaPredicted RBP28.1■■■□□ 2.09
HLA-F-228ENST00000486194 KLRG1Q96E93 195 aa28.1■■■□□ 2.09
HLA-F-228ENST00000486194 CLEC11AQ9Y240 323 aa28.09■■■□□ 2.09
HLA-F-228ENST00000486194 NEURL1BA8MQ27 555 aa28.08■■■□□ 2.09
HLA-F-228ENST00000486194 WASHC4Q2M389 1173 aa28.07■■■□□ 2.08
HLA-F-228ENST00000486194 JARID2Q92833 1246 aaPredicted RBP28.07■■■□□ 2.08
HLA-F-228ENST00000486194 EYA3Q99504 573 aa28.07■■■□□ 2.08
HLA-F-228ENST00000486194 SPINK5Q9NQ38 1064 aaPredicted RBP28.07■■■□□ 2.08
HLA-F-228ENST00000486194 TAF1P21675 1872 aa28.06■■■□□ 2.08
HLA-F-228ENST00000486194 C6orf229H3BNL8 230 aa28.06■■■□□ 2.08
HLA-F-228ENST00000486194 SCNN1DP51172 638 aa28.06■■■□□ 2.08
HLA-F-228ENST00000486194 CXCL9Q07325 125 aa28.06■■■□□ 2.08
HLA-F-228ENST00000486194 TNIP1Q15025 636 aa28.06■■■□□ 2.08
HLA-F-228ENST00000486194 CWF19L2Q2TBE0 894 aaKnown RBP28.06■■■□□ 2.08
HLA-F-228ENST00000486194 DNAAF4Q8WXU2 420 aa28.06■■■□□ 2.08
HLA-F-228ENST00000486194 SEC31BQ9NQW1 1179 aa28.06■■■□□ 2.08
HLA-F-228ENST00000486194 CTSWP56202 376 aa28.05■■■□□ 2.08
HLA-F-228ENST00000486194 GPSM2P81274 684 aa28.05■■■□□ 2.08
HLA-F-228ENST00000486194 CIAPIN1Q6FI81 312 aa28.05■■■□□ 2.08
HLA-F-228ENST00000486194 DUOX1Q9NRD9 1551 aa28.04■■■□□ 2.08
HLA-F-228ENST00000486194 ANKRD18AQ8IVF6 992 aa28.04■■■□□ 2.08
HLA-F-228ENST00000486194 LINS1Q8NG48 757 aa28.04■■■□□ 2.08
HLA-F-228ENST00000486194 CDC5LQ99459 802 aaKnown RBP28.04■■■□□ 2.08
HLA-F-228ENST00000486194 PODXL2Q9NZ53 605 aa28.04■■■□□ 2.08
HLA-F-228ENST00000486194 CACNA1FO60840 1977 aa28.03■■■□□ 2.08
HLA-F-228ENST00000486194 USP50Q70EL3 339 aaPredicted RBP28.03■■■□□ 2.08
HLA-F-228ENST00000486194 CREBZFQ9NS37 354 aa28.03■■■□□ 2.08
HLA-F-228ENST00000486194 ZNF521Q96K83 1311 aa28.02■■■□□ 2.08
HLA-F-228ENST00000486194 H7C1W4 665 aa28.02■■■□□ 2.08
HLA-F-228ENST00000486194 EPS15P42566 896 aa28.02■■■□□ 2.08
HLA-F-228ENST00000486194 GCKRQ14397 625 aa28.02■■■□□ 2.08
HLA-F-228ENST00000486194 UBE3BQ7Z3V4 1068 aa28.02■■■□□ 2.08
HLA-F-228ENST00000486194 CCDC85AQ96PX6 553 aaPredicted RBP28.02■■■□□ 2.08
HLA-F-228ENST00000486194 GPRC5DQ9NZD1 345 aa28.02■■■□□ 2.08
HLA-F-228ENST00000486194 ANKIB1Q9P2G1 1089 aa28.02■■■□□ 2.08
HLA-F-228ENST00000486194 POLLQ9UGP5 575 aa28.02■■■□□ 2.08
HLA-F-228ENST00000486194 PASKQ96RG2 1323 aa28.01■■■□□ 2.07
HLA-F-228ENST00000486194 JMYQ8N9B5 988 aa28.01■■■□□ 2.07
HLA-F-228ENST00000486194 TTLL11Q8NHH1 800 aa28.01■■■□□ 2.07
HLA-F-228ENST00000486194 ADAMTSL1Q8N6G6 1762 aa28.01■■■□□ 2.07
HLA-F-228ENST00000486194 RAD17O75943 681 aa28■■■□□ 2.07
HLA-F-228ENST00000486194 CNTROBQ8N137 903 aa28■■■□□ 2.07
HLA-F-228ENST00000486194 TBC1D16Q8TBP0 767 aa28■■■□□ 2.07
HLA-F-228ENST00000486194 BCL2L13Q9BXK5 485 aa28■■■□□ 2.07
HLA-F-228ENST00000486194 ADARB2Q9NS39 739 aaKnown RBP28■■■□□ 2.07
HLA-F-228ENST00000486194 GGA1Q9UJY5 639 aa28■■■□□ 2.07
HLA-F-228ENST00000486194 RTL9Q8NET4 1388 aa27.99■■■□□ 2.07
HLA-F-228ENST00000486194 RIMBP2O15034 1052 aa27.99■■■□□ 2.07
HLA-F-228ENST00000486194 ITGBL1O95965 494 aaPredicted RBP27.99■■■□□ 2.07
HLA-F-228ENST00000486194 GMPSP49915 693 aaPredicted RBP27.99■■■□□ 2.07
HLA-F-228ENST00000486194 ZC3H12CQ9C0D7 883 aaKnown RBP27.99■■■□□ 2.07
HLA-F-228ENST00000486194 COL4A1P02462 1669 aa27.99■■■□□ 2.07
HLA-F-228ENST00000486194 PLA2G12BQ9BX93 195 aa27.98■■■□□ 2.07
HLA-F-228ENST00000486194 LTBP1Q14766 1721 aa27.98■■■□□ 2.07
HLA-F-228ENST00000486194 XDHP47989 1333 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms