RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ERFEQ4G0M1 354 aa17.8■□□□□ 0.44
COL9A1-207ENST00000486080 ERC1Q8IUD2 1116 aa17.8■□□□□ 0.44
COL9A1-207ENST00000486080 GREM2Q9H772 168 aa17.8■□□□□ 0.44
COL9A1-207ENST00000486080 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
COL9A1-207ENST00000486080 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
COL9A1-207ENST00000486080 GYS1P13807 737 aa17.79■□□□□ 0.44
COL9A1-207ENST00000486080 CCDC57Q2TAC2 916 aa17.79■□□□□ 0.44
COL9A1-207ENST00000486080 NFIXQ14938 502 aa17.79■□□□□ 0.44
COL9A1-207ENST00000486080 C8orf34Q49A92 452 aa17.79■□□□□ 0.44
COL9A1-207ENST00000486080 BACH2Q9BYV9 841 aa17.79■□□□□ 0.44
COL9A1-207ENST00000486080 ITGA6P23229 1130 aa17.78■□□□□ 0.44
COL9A1-207ENST00000486080 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
COL9A1-207ENST00000486080 TSHZ3Q63HK5 1081 aa17.78■□□□□ 0.44
COL9A1-207ENST00000486080 ATG9AQ7Z3C6 839 aa17.78■□□□□ 0.44
COL9A1-207ENST00000486080 NBPF5PQ86XG9 351 aaPredicted RBP17.78■□□□□ 0.44
COL9A1-207ENST00000486080 PUS3Q9BZE2 481 aaKnown RBP17.78■□□□□ 0.44
COL9A1-207ENST00000486080 PDE1AP54750 535 aa17.77■□□□□ 0.44
COL9A1-207ENST00000486080 LRRC24Q50LG9 513 aa17.77■□□□□ 0.44
COL9A1-207ENST00000486080 DEFB132Q7Z7B7 95 aa17.77■□□□□ 0.44
COL9A1-207ENST00000486080 COL23A1Q86Y22 540 aaPredicted RBP17.77■□□□□ 0.44
COL9A1-207ENST00000486080 MX1P20591 662 aa17.77■□□□□ 0.43
COL9A1-207ENST00000486080 TFCP2Q12800 502 aa17.77■□□□□ 0.43
COL9A1-207ENST00000486080 C3orf67Q6ZVT6 689 aa17.77■□□□□ 0.43
COL9A1-207ENST00000486080 CCDC24Q8N4L8 307 aa17.77■□□□□ 0.43
COL9A1-207ENST00000486080 NYXQ9GZU5 481 aa17.77■□□□□ 0.43
COL9A1-207ENST00000486080 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
COL9A1-207ENST00000486080 GSPT1P15170 499 aaKnown RBP17.76■□□□□ 0.43
COL9A1-207ENST00000486080 GTF2E1P29083 439 aaPredicted RBP17.76■□□□□ 0.43
COL9A1-207ENST00000486080 SF3B2Q13435 895 aaKnown RBP17.76■□□□□ 0.43
COL9A1-207ENST00000486080 CLASRPQ8N2M8 674 aaKnown RBP17.76■□□□□ 0.43
COL9A1-207ENST00000486080 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
COL9A1-207ENST00000486080 ANKRD18BA2A2Z9 1011 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 EYA2O00167 538 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 MSH5O43196 834 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 BMP2KLQ5H9B9 411 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 TAF7LQ5H9L4 462 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 TTC22Q5TAA0 569 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 EAF2Q96CJ1 260 aaPredicted RBP17.75■□□□□ 0.43
COL9A1-207ENST00000486080 OSBPL3Q9H4L5 887 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 PNPLA7Q6ZV29 1317 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 BAG6P46379 1132 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 TPTE2Q6XPS3 522 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 AACSQ86V21 672 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
COL9A1-207ENST00000486080 TAF1P21675 1872 aa17.74■□□□□ 0.43
COL9A1-207ENST00000486080 CIAO1O76071 339 aa17.74■□□□□ 0.43
COL9A1-207ENST00000486080 HSP90B1P14625 803 aaKnown RBP17.74■□□□□ 0.43
COL9A1-207ENST00000486080 IL15P40933 162 aaPredicted RBP17.74■□□□□ 0.43
COL9A1-207ENST00000486080 UPF1Q92900 1129 aaKnown RBP eCLIP17.74■□□□□ 0.43
COL9A1-207ENST00000486080 SEC31BQ9NQW1 1179 aa17.74■□□□□ 0.43
COL9A1-207ENST00000486080 SPEF2Q9C093 1822 aa17.74■□□□□ 0.43
COL9A1-207ENST00000486080 TM4SF1P30408 202 aa17.73■□□□□ 0.43
COL9A1-207ENST00000486080 CCDC152Q4G0S7 254 aa17.73■□□□□ 0.43
COL9A1-207ENST00000486080 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
COL9A1-207ENST00000486080 COL4A1P02462 1669 aa17.72■□□□□ 0.43
COL9A1-207ENST00000486080 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
COL9A1-207ENST00000486080 TLR7Q9NYK1 1049 aaKnown RBP17.72■□□□□ 0.43
COL9A1-207ENST00000486080 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
COL9A1-207ENST00000486080 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
COL9A1-207ENST00000486080 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.43
COL9A1-207ENST00000486080 NPHP1O15259 732 aa17.71■□□□□ 0.43
COL9A1-207ENST00000486080 DDR1Q08345 913 aa17.71■□□□□ 0.43
COL9A1-207ENST00000486080 TNNI3KQ59H18 835 aa17.71■□□□□ 0.43
COL9A1-207ENST00000486080 LDHAL6AQ6ZMR3 332 aa17.71■□□□□ 0.43
COL9A1-207ENST00000486080 FPGT-TNNI3KV9GXZ4 949 aa17.71■□□□□ 0.43
COL9A1-207ENST00000486080 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
COL9A1-207ENST00000486080 CNBD1Q8NA66 436 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 PI4K2BQ8TCG2 481 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 STK32BQ9NY57 414 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 FBXO3Q9UK99 471 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 RIPOR2Q9Y4F9 1068 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 LRP5O75197 1615 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 SERPINB2P05120 415 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 SDSP20132 328 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
COL9A1-207ENST00000486080 AOX1Q06278 1338 aa17.69■□□□□ 0.42
COL9A1-207ENST00000486080 RIC1Q4ADV7 1423 aa17.69■□□□□ 0.42
COL9A1-207ENST00000486080 POLRMTO00411 1230 aaKnown RBP17.69■□□□□ 0.42
COL9A1-207ENST00000486080 SEC24BO95487 1268 aa17.69■□□□□ 0.42
COL9A1-207ENST00000486080 NLRP3Q96P20 1036 aa17.69■□□□□ 0.42
COL9A1-207ENST00000486080 CNNM1Q9NRU3 951 aa17.69■□□□□ 0.42
COL9A1-207ENST00000486080 CEP126Q9P2H0 1117 aa17.69■□□□□ 0.42
COL9A1-207ENST00000486080 RBM19Q9Y4C8 960 aaKnown RBP17.69■□□□□ 0.42
COL9A1-207ENST00000486080 QSER1Q2KHR3 1735 aa17.69■□□□□ 0.42
COL9A1-207ENST00000486080 NLGN1Q8N2Q7 840 aa17.68■□□□□ 0.42
COL9A1-207ENST00000486080 DBNLQ9UJU6 430 aaKnown RBP17.68■□□□□ 0.42
COL9A1-207ENST00000486080 TIMM10P62072 90 aa17.68■□□□□ 0.42
COL9A1-207ENST00000486080 MSL1Q68DK7 614 aa17.68■□□□□ 0.42
COL9A1-207ENST00000486080 ECHDC1Q9NTX5 307 aa17.68■□□□□ 0.42
COL9A1-207ENST00000486080 TTC41PQ6P2S7 1318 aa17.67■□□□□ 0.42
COL9A1-207ENST00000486080 MAP4K4O95819 1239 aaPredicted RBP17.67■□□□□ 0.42
COL9A1-207ENST00000486080 METTL24Q5JXM2 366 aa17.67■□□□□ 0.42
COL9A1-207ENST00000486080 DBNDD2Q9BQY9 259 aa17.67■□□□□ 0.42
COL9A1-207ENST00000486080 GPR108Q9NPR9 543 aa17.67■□□□□ 0.42
COL9A1-207ENST00000486080 ZNF609O15014 1411 aa17.67■□□□□ 0.42
COL9A1-207ENST00000486080 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
COL9A1-207ENST00000486080 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms