RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ZNF827Q17R98 1081 aa7.34□□□□□ -1.23
COPS3-208ENST00000486032 AMIGO3Q86WK7 504 aa7.34□□□□□ -1.23
COPS3-208ENST00000486032 NPAS3Q8IXF0 933 aa7.34□□□□□ -1.23
COPS3-208ENST00000486032 SRCAPQ6ZRS2 3230 aa7.34□□□□□ -1.23
COPS3-208ENST00000486032 BTBD11A6QL63 1104 aa7.33□□□□□ -1.24
COPS3-208ENST00000486032 ACTN4O43707 911 aaKnown RBP7.33□□□□□ -1.24
COPS3-208ENST00000486032 HTATSF1O43719 755 aaKnown RBP7.33□□□□□ -1.24
COPS3-208ENST00000486032 WWC1Q8IX03 1113 aa7.33□□□□□ -1.24
COPS3-208ENST00000486032 PIGBQ92521 554 aa7.33□□□□□ -1.24
COPS3-208ENST00000486032 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
COPS3-208ENST00000486032 TSPYL4Q9UJ04 414 aa7.33□□□□□ -1.24
COPS3-208ENST00000486032 PLEKHG2Q9H7P9 1386 aa7.33□□□□□ -1.24
COPS3-208ENST00000486032 ADAMTS7Q9UKP4 1686 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 ERVV-2B6SEH9 535 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 KCNQ3O43525 872 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 PTCD1O75127 700 aaKnown RBP7.32□□□□□ -1.24
COPS3-208ENST00000486032 NR1I2O75469 434 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 TAF7Q15545 349 aaPredicted RBP7.32□□□□□ -1.24
COPS3-208ENST00000486032 TXNRD1Q16881 649 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 KMT5BQ4FZB7 885 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 CCDC125Q86Z20 511 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 TTC5Q8N0Z6 440 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 TSR2Q969E8 191 aaKnown RBP7.32□□□□□ -1.24
COPS3-208ENST00000486032 ASAP1Q9ULH1 1129 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 SCN11AQ9UI33 1791 aa7.32□□□□□ -1.24
COPS3-208ENST00000486032 CALD1Q05682 793 aaKnown RBP7.31□□□□□ -1.24
COPS3-208ENST00000486032 TJP1Q07157 1748 aa7.31□□□□□ -1.24
COPS3-208ENST00000486032 CCDC27Q2M243 656 aa7.31□□□□□ -1.24
COPS3-208ENST00000486032 SLC4A9Q96Q91 983 aa7.31□□□□□ -1.24
COPS3-208ENST00000486032 ATG3Q9NT62 314 aa7.31□□□□□ -1.24
COPS3-208ENST00000486032 TAF1LQ8IZX4 1826 aa7.31□□□□□ -1.24
COPS3-208ENST00000486032 C5P01031 1676 aa7.31□□□□□ -1.24
COPS3-208ENST00000486032 ELL2O00472 640 aaPredicted RBP7.3□□□□□ -1.24
COPS3-208ENST00000486032 SMPD1P17405 629 aa7.3□□□□□ -1.24
COPS3-208ENST00000486032 GNAI1P63096 354 aa7.3□□□□□ -1.24
COPS3-208ENST00000486032 WDR63Q8IWG1 891 aa7.3□□□□□ -1.24
COPS3-208ENST00000486032 TMEM151AQ8N4L1 468 aa7.3□□□□□ -1.24
COPS3-208ENST00000486032 MBIPQ9NS73 344 aa7.3□□□□□ -1.24
COPS3-208ENST00000486032 SIPA1L3O60292 1781 aaPredicted RBP7.3□□□□□ -1.24
COPS3-208ENST00000486032 CEMIPQ8WUJ3 1361 aa7.3□□□□□ -1.24
COPS3-208ENST00000486032 PALLDQ8WX93 1383 aa7.3□□□□□ -1.24
COPS3-208ENST00000486032 PLSCR1O15162 318 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 ITPK1Q13572 414 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 PDIA6Q15084 440 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 KRT24Q2M2I5 525 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 XP32Q5T750 250 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 ZNF790Q6PG37 636 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 NGEFQ8N5V2 710 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 TTC13Q8NBP0 860 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 SMARCC1Q92922 1105 aaPredicted RBP7.29□□□□□ -1.24
COPS3-208ENST00000486032 CFAP44Q96MT7 982 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 IFT57Q9NWB7 429 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 MRC1P22897 1456 aa7.29□□□□□ -1.24
COPS3-208ENST00000486032 ZBED9Q6R2W3 1325 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 KCPQ6ZWJ8 1503 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 LRP5O75197 1615 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 C4BP0C0L5 1744 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 COL5A3P25940 1745 aaPredicted RBP7.28□□□□□ -1.24
COPS3-208ENST00000486032 PRAMEF22A3QJZ6 481 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 CHL1O00533 1208 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 TCERG1O14776 1098 aaKnown RBP7.28□□□□□ -1.24
COPS3-208ENST00000486032 EIF2S2P20042 333 aaKnown RBP7.28□□□□□ -1.24
COPS3-208ENST00000486032 ATP6V1AP38606 617 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 GSK3AP49840 483 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 LINC00116Q8NCU8 138 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 SNIP1Q8TAD8 396 aaKnown RBP7.28□□□□□ -1.24
COPS3-208ENST00000486032 ZNF496Q96IT1 587 aaPredicted RBP7.28□□□□□ -1.24
COPS3-208ENST00000486032 FMNL2Q96PY5 1086 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 MYH16Q9H6N6 1097 aa7.28□□□□□ -1.24
COPS3-208ENST00000486032 CCNL1Q9UK58 526 aaPredicted RBP7.28□□□□□ -1.24
COPS3-208ENST00000486032 ZNF521Q96K83 1311 aa7.27□□□□□ -1.24
COPS3-208ENST00000486032 FANCIQ9NVI1 1328 aa7.27□□□□□ -1.24
COPS3-208ENST00000486032 LOC102724428A0A0B4J2F2 783 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 E9PSI1 815 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 GTPBP6O43824 516 aaPredicted RBP7.27□□□□□ -1.25
COPS3-208ENST00000486032 ZNF853P0CG23 659 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 SIK1P57059 783 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 EIF4A1P60842 406 aaKnown RBP7.27□□□□□ -1.25
COPS3-208ENST00000486032 EXOSC9Q06265 439 aaKnown RBP7.27□□□□□ -1.25
COPS3-208ENST00000486032 SLFN5Q08AF3 891 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 DNAJC10Q8IXB1 793 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 CDHR5Q9HBB8 845 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 ZNF330Q9Y3S2 320 aaPredicted RBP7.27□□□□□ -1.25
COPS3-208ENST00000486032 UBR3Q6ZT12 1888 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 IL16Q14005 1332 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 PNPLA7Q6ZV29 1317 aa7.27□□□□□ -1.25
COPS3-208ENST00000486032 UBR2Q8IWV8 1755 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 SPDYE16A6NNV3 312 aaPredicted RBP7.26□□□□□ -1.25
COPS3-208ENST00000486032 H3BM21 787 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 ZBTB7AO95365 584 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 PIP4K2AP48426 406 aaPredicted RBP7.26□□□□□ -1.25
COPS3-208ENST00000486032 DUSP27Q5VZP5 1158 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 PADI6Q6TGC4 694 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 TSPYL6Q8N831 410 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 C8orf58Q8NAV2 365 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 ARXQ96QS3 562 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 USP16Q9Y5T5 823 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 QSER1Q2KHR3 1735 aa7.26□□□□□ -1.25
COPS3-208ENST00000486032 MYH14Q7Z406 1995 aaKnown RBP7.26□□□□□ -1.25
COPS3-208ENST00000486032 KDM3BQ7LBC6 1761 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms