RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 NPR1P16066 1061 aa15□□□□□ -0.01
APTX-227ENST00000485479 ITPRIPQ8IWB1 547 aa15□□□□□ -0.01
APTX-227ENST00000485479 GREM2Q9H772 168 aa15□□□□□ -0.01
APTX-227ENST00000485479 CHMP3Q9Y3E7 222 aa15□□□□□ -0.01
APTX-227ENST00000485479 CDHR2Q9BYE9 1310 aa15□□□□□ -0.01
APTX-227ENST00000485479 SPEF2Q9C093 1822 aa14.99□□□□□ -0.01
APTX-227ENST00000485479 PDE8AO60658 829 aa14.99□□□□□ -0.01
APTX-227ENST00000485479 CTSWP56202 376 aa14.99□□□□□ -0.01
APTX-227ENST00000485479 FAM161AQ3B820 660 aa14.99□□□□□ -0.01
APTX-227ENST00000485479 DZIP1LQ8IYY4 767 aaKnown RBP14.99□□□□□ -0.01
APTX-227ENST00000485479 CELF1Q92879 486 aaKnown RBP14.99□□□□□ -0.01
APTX-227ENST00000485479 KAZALD1Q96I82 304 aa14.99□□□□□ -0.01
APTX-227ENST00000485479 RIC1Q4ADV7 1423 aa14.99□□□□□ -0.01
APTX-227ENST00000485479 CCT4P50991 539 aaKnown RBP14.98□□□□□ -0.01
APTX-227ENST00000485479 STYK1Q6J9G0 422 aa14.98□□□□□ -0.01
APTX-227ENST00000485479 TTLL11Q8NHH1 800 aa14.98□□□□□ -0.01
APTX-227ENST00000485479 BICC1Q9H694 974 aaKnown RBP14.98□□□□□ -0.01
APTX-227ENST00000485479 FOXO4P98177 505 aa14.97□□□□□ -0.01
APTX-227ENST00000485479 INTS3Q68E01 1043 aaKnown RBP14.97□□□□□ -0.01
APTX-227ENST00000485479 DDX46Q7L014 1031 aaKnown RBP14.97□□□□□ -0.01
APTX-227ENST00000485479 RBM17Q96I25 401 aaKnown RBP14.97□□□□□ -0.01
APTX-227ENST00000485479 C1orf115Q9H7X2 142 aa14.97□□□□□ -0.01
APTX-227ENST00000485479 COG6Q9Y2V7 657 aa14.97□□□□□ -0.01
APTX-227ENST00000485479 ARFGEF1Q9Y6D6 1849 aa14.96□□□□□ -0.01
APTX-227ENST00000485479 SF3B3Q15393 1217 aaKnown RBP14.96□□□□□ -0.01
APTX-227ENST00000485479 LMBR1LQ6UX01 489 aa14.96□□□□□ -0.01
APTX-227ENST00000485479 RASSF7Q02833 373 aa14.96□□□□□ -0.01
APTX-227ENST00000485479 CNKSR1Q969H4 720 aa14.96□□□□□ -0.01
APTX-227ENST00000485479 LRRFIP2Q9Y608 721 aaKnown RBP14.96□□□□□ -0.01
APTX-227ENST00000485479 PPEF1O14829 653 aaPredicted RBP14.95□□□□□ -0.02
APTX-227ENST00000485479 UBTFL1P0CB47 393 aaPredicted RBP14.95□□□□□ -0.02
APTX-227ENST00000485479 HOXA10P31260 410 aaPredicted RBP14.95□□□□□ -0.02
APTX-227ENST00000485479 CCDC152Q4G0S7 254 aa14.95□□□□□ -0.02
APTX-227ENST00000485479 ARHGAP27Q6ZUM4 889 aa14.95□□□□□ -0.02
APTX-227ENST00000485479 ZNF594Q96JF6 807 aaPredicted RBP14.95□□□□□ -0.02
APTX-227ENST00000485479 UTYO14607 1347 aa14.95□□□□□ -0.02
APTX-227ENST00000485479 ITGA6P23229 1130 aa14.94□□□□□ -0.02
APTX-227ENST00000485479 GRAPQ13588 217 aa14.94□□□□□ -0.02
APTX-227ENST00000485479 GRAPLQ8TC17 118 aaPredicted RBP14.94□□□□□ -0.02
APTX-227ENST00000485479 ALDH1B1P30837 517 aa14.94□□□□□ -0.02
APTX-227ENST00000485479 RRP1P56182 461 aaKnown RBP14.94□□□□□ -0.02
APTX-227ENST00000485479 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
APTX-227ENST00000485479 ANKRD44Q8N8A2 993 aa14.94□□□□□ -0.02
APTX-227ENST00000485479 KLHDC4Q8TBB5 520 aa14.94□□□□□ -0.02
APTX-227ENST00000485479 PLA2G12BQ9BX93 195 aa14.94□□□□□ -0.02
APTX-227ENST00000485479 CRAMP1Q96RY5 1269 aa14.93□□□□□ -0.02
APTX-227ENST00000485479 SUPT16HQ9Y5B9 1047 aaKnown RBP14.93□□□□□ -0.02
APTX-227ENST00000485479 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
APTX-227ENST00000485479 PDZRN3Q9UPQ7 1066 aa14.93□□□□□ -0.02
APTX-227ENST00000485479 CSF1RP07333 972 aa14.92□□□□□ -0.02
APTX-227ENST00000485479 PRELPP51888 382 aa14.92□□□□□ -0.02
APTX-227ENST00000485479 WTIPA6NIX2 430 aaPredicted RBP14.91□□□□□ -0.02
APTX-227ENST00000485479 NFKBIEO00221 500 aa14.91□□□□□ -0.02
APTX-227ENST00000485479 IRX6P78412 446 aaPredicted RBP14.91□□□□□ -0.02
APTX-227ENST00000485479 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
APTX-227ENST00000485479 HSP90B1P14625 803 aaKnown RBP14.91□□□□□ -0.02
APTX-227ENST00000485479 RPS8P62241 208 aaKnown RBP14.91□□□□□ -0.02
APTX-227ENST00000485479 MVPQ14764 893 aaKnown RBP14.91□□□□□ -0.02
APTX-227ENST00000485479 ANKRD18AQ8IVF6 992 aa14.91□□□□□ -0.02
APTX-227ENST00000485479 GPR101Q96P66 508 aaPredicted RBP14.91□□□□□ -0.02
APTX-227ENST00000485479 ZBTB7BO15156 539 aaPredicted RBP14.9□□□□□ -0.02
APTX-227ENST00000485479 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
APTX-227ENST00000485479 FER1L6Q2WGJ9 1857 aa14.9□□□□□ -0.02
APTX-227ENST00000485479 CCDC88AQ3V6T2 1871 aa14.9□□□□□ -0.02
APTX-227ENST00000485479 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.89□□□□□ -0.03
APTX-227ENST00000485479 ZNF277Q9NRM2 450 aaPredicted RBP14.89□□□□□ -0.03
APTX-227ENST00000485479 ATP6V0A2Q9Y487 856 aa14.89□□□□□ -0.03
APTX-227ENST00000485479 ANKRD18BA2A2Z9 1011 aa14.89□□□□□ -0.03
APTX-227ENST00000485479 SNAP23O00161 211 aa14.89□□□□□ -0.03
APTX-227ENST00000485479 CCDC57Q2TAC2 916 aa14.89□□□□□ -0.03
APTX-227ENST00000485479 RABL6Q3YEC7 729 aaPredicted RBP14.89□□□□□ -0.03
APTX-227ENST00000485479 CCDC93Q567U6 631 aa14.89□□□□□ -0.03
APTX-227ENST00000485479 PUS3Q9BZE2 481 aaKnown RBP14.89□□□□□ -0.03
APTX-227ENST00000485479 SNED1Q8TER0 1413 aa14.89□□□□□ -0.03
APTX-227ENST00000485479 LRRC37AA6NMS7 1700 aa14.88□□□□□ -0.03
APTX-227ENST00000485479 GRIN3BO60391 1043 aa14.88□□□□□ -0.03
APTX-227ENST00000485479 BBOX1O75936 387 aa14.88□□□□□ -0.03
APTX-227ENST00000485479 GNAI3P08754 354 aa14.88□□□□□ -0.03
APTX-227ENST00000485479 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
APTX-227ENST00000485479 HELBQ8NG08 1087 aaPredicted RBP14.88□□□□□ -0.03
APTX-227ENST00000485479 CDC5LQ99459 802 aaKnown RBP14.88□□□□□ -0.03
APTX-227ENST00000485479 SIL1Q9H173 461 aa14.88□□□□□ -0.03
APTX-227ENST00000485479 NSFL1CQ9UNZ2 370 aaKnown RBP14.88□□□□□ -0.03
APTX-227ENST00000485479 PA2G4Q9UQ80 394 aaKnown RBP14.88□□□□□ -0.03
APTX-227ENST00000485479 DUOX1Q9NRD9 1551 aa14.88□□□□□ -0.03
APTX-227ENST00000485479 PNMA6EA0A0J9YXQ4 647 aa14.87□□□□□ -0.03
APTX-227ENST00000485479 GPSM2P81274 684 aa14.87□□□□□ -0.03
APTX-227ENST00000485479 RTL9Q8NET4 1388 aa14.87□□□□□ -0.03
APTX-227ENST00000485479 SBF1O95248 1867 aa14.87□□□□□ -0.03
APTX-227ENST00000485479 GNAI2P04899 355 aa14.87□□□□□ -0.03
APTX-227ENST00000485479 IGHMBP2P38935 993 aaKnown RBP14.87□□□□□ -0.03
APTX-227ENST00000485479 LRRC24Q50LG9 513 aa14.87□□□□□ -0.03
APTX-227ENST00000485479 MPHOSPH8Q99549 860 aa14.87□□□□□ -0.03
APTX-227ENST00000485479 TAOK3Q9H2K8 898 aa14.87□□□□□ -0.03
APTX-227ENST00000485479 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
APTX-227ENST00000485479 TAF5LO75529 589 aa14.86□□□□□ -0.03
APTX-227ENST00000485479 PDE3AQ14432 1141 aa14.86□□□□□ -0.03
APTX-227ENST00000485479 SP8Q8IXZ3 490 aa14.86□□□□□ -0.03
APTX-227ENST00000485479 CRBNQ96SW2 442 aa14.86□□□□□ -0.03
APTX-227ENST00000485479 ANKIB1Q9P2G1 1089 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms