RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 AOC3Q16853 763 aa17.25■□□□□ 0.35
UBA3-210ENST00000485424 SLC10A5Q5PT55 438 aa17.25■□□□□ 0.35
UBA3-210ENST00000485424 AIDAQ96BJ3 306 aa17.25■□□□□ 0.35
UBA3-210ENST00000485424 ATP6V0A2Q9Y487 856 aa17.25■□□□□ 0.35
UBA3-210ENST00000485424 CTCFP49711 727 aaPredicted RBP17.24■□□□□ 0.35
UBA3-210ENST00000485424 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
UBA3-210ENST00000485424 COPS6Q7L5N1 327 aa17.24■□□□□ 0.35
UBA3-210ENST00000485424 PRDM10Q9NQV6 1147 aa17.24■□□□□ 0.35
UBA3-210ENST00000485424 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
UBA3-210ENST00000485424 WBP1LQ9NX94 342 aa17.24■□□□□ 0.35
UBA3-210ENST00000485424 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
UBA3-210ENST00000485424 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.35
UBA3-210ENST00000485424 HDGFL1Q5TGJ6 251 aa17.23■□□□□ 0.35
UBA3-210ENST00000485424 XAGE3Q8WTP9 111 aa17.23■□□□□ 0.35
UBA3-210ENST00000485424 ABT1Q9ULW3 272 aaKnown RBP17.23■□□□□ 0.35
UBA3-210ENST00000485424 ZNF646O15015 1829 aaPredicted RBP17.23■□□□□ 0.35
UBA3-210ENST00000485424 WDR33Q9C0J8 1336 aaKnown RBP17.22■□□□□ 0.35
UBA3-210ENST00000485424 CACNA1FO60840 1977 aa17.22■□□□□ 0.35
UBA3-210ENST00000485424 CHL1O00533 1208 aa17.22■□□□□ 0.35
UBA3-210ENST00000485424 USP50Q70EL3 339 aaPredicted RBP17.22■□□□□ 0.35
UBA3-210ENST00000485424 NLRP10Q86W26 655 aa17.22■□□□□ 0.35
UBA3-210ENST00000485424 RTFDC1Q9BY42 306 aaPredicted RBP17.22■□□□□ 0.35
UBA3-210ENST00000485424 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
UBA3-210ENST00000485424 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
UBA3-210ENST00000485424 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
UBA3-210ENST00000485424 HCLS1P14317 486 aaPredicted RBP17.21■□□□□ 0.35
UBA3-210ENST00000485424 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
UBA3-210ENST00000485424 GPRC5DQ9NZD1 345 aa17.21■□□□□ 0.35
UBA3-210ENST00000485424 HOXB7P09629 217 aa17.2■□□□□ 0.34
UBA3-210ENST00000485424 LBX1P52954 281 aa17.2■□□□□ 0.34
UBA3-210ENST00000485424 CALD1Q05682 793 aaKnown RBP17.2■□□□□ 0.34
UBA3-210ENST00000485424 CXCL9Q07325 125 aa17.2■□□□□ 0.34
UBA3-210ENST00000485424 TCIRG1Q13488 830 aa17.2■□□□□ 0.34
UBA3-210ENST00000485424 SUPT20HQ8NEM7 779 aa17.2■□□□□ 0.34
UBA3-210ENST00000485424 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
UBA3-210ENST00000485424 DBF4Q9UBU7 674 aaPredicted RBP17.2■□□□□ 0.34
UBA3-210ENST00000485424 TRMT112Q9UI30 125 aaKnown RBP17.2■□□□□ 0.34
UBA3-210ENST00000485424 SH3TC1Q8TE82 1336 aa17.2■□□□□ 0.34
UBA3-210ENST00000485424 TRAF5O00463 557 aa17.19■□□□□ 0.34
UBA3-210ENST00000485424 HSPA8P11142 646 aaKnown RBP17.19■□□□□ 0.34
UBA3-210ENST00000485424 DPP8Q6V1X1 898 aaPredicted RBP17.19■□□□□ 0.34
UBA3-210ENST00000485424 SP8Q8IXZ3 490 aa17.19■□□□□ 0.34
UBA3-210ENST00000485424 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
UBA3-210ENST00000485424 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
UBA3-210ENST00000485424 ZNRF3Q9ULT6 936 aa17.19■□□□□ 0.34
UBA3-210ENST00000485424 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
UBA3-210ENST00000485424 BBOX1O75936 387 aa17.18■□□□□ 0.34
UBA3-210ENST00000485424 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
UBA3-210ENST00000485424 GRAPQ13588 217 aa17.18■□□□□ 0.34
UBA3-210ENST00000485424 CST9Q5W186 159 aa17.18■□□□□ 0.34
UBA3-210ENST00000485424 DDX46Q7L014 1031 aaKnown RBP17.18■□□□□ 0.34
UBA3-210ENST00000485424 MPNDQ8N594 471 aa17.18■□□□□ 0.34
UBA3-210ENST00000485424 GRAPLQ8TC17 118 aaPredicted RBP17.18■□□□□ 0.34
UBA3-210ENST00000485424 GMPSP49915 693 aaPredicted RBP17.17■□□□□ 0.34
UBA3-210ENST00000485424 MAP2K1Q02750 393 aaPredicted RBP17.17■□□□□ 0.34
UBA3-210ENST00000485424 DUSP27Q5VZP5 1158 aa17.17■□□□□ 0.34
UBA3-210ENST00000485424 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
UBA3-210ENST00000485424 ZNF428Q96B54 188 aa17.17■□□□□ 0.34
UBA3-210ENST00000485424 CAPNS2Q96L46 248 aa17.17■□□□□ 0.34
UBA3-210ENST00000485424 HYPKQ9NX55 129 aa17.17■□□□□ 0.34
UBA3-210ENST00000485424 A0A1B0GUL6 1792 aa17.16■□□□□ 0.34
UBA3-210ENST00000485424 APAF1O14727 1248 aa17.16■□□□□ 0.34
UBA3-210ENST00000485424 GNAI1P63096 354 aa17.16■□□□□ 0.34
UBA3-210ENST00000485424 CIAPIN1Q6FI81 312 aa17.16■□□□□ 0.34
UBA3-210ENST00000485424 CYP4F22Q6NT55 531 aa17.16■□□□□ 0.34
UBA3-210ENST00000485424 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
UBA3-210ENST00000485424 PAXIP1Q6ZW49 1069 aaPredicted RBP17.16■□□□□ 0.34
UBA3-210ENST00000485424 MBIPQ9NS73 344 aa17.16■□□□□ 0.34
UBA3-210ENST00000485424 TLL2Q9Y6L7 1015 aa17.15■□□□□ 0.34
UBA3-210ENST00000485424 TNRC18O15417 2968 aaPredicted RBP17.14■□□□□ 0.33
UBA3-210ENST00000485424 YDJCA8MPS7 323 aa17.14■□□□□ 0.33
UBA3-210ENST00000485424 RAD17O75943 681 aa17.14■□□□□ 0.33
UBA3-210ENST00000485424 ECE1P42892 770 aa17.14■□□□□ 0.33
UBA3-210ENST00000485424 GRM1Q13255 1194 aa17.14■□□□□ 0.33
UBA3-210ENST00000485424 TMC4Q7Z404 712 aa17.14■□□□□ 0.33
UBA3-210ENST00000485424 RIC3Q7Z5B4 369 aa17.14■□□□□ 0.33
UBA3-210ENST00000485424 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
UBA3-210ENST00000485424 IFT57Q9NWB7 429 aa17.14■□□□□ 0.33
UBA3-210ENST00000485424 GOLGA2Q08379 1002 aa17.13■□□□□ 0.33
UBA3-210ENST00000485424 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
UBA3-210ENST00000485424 ISCA1Q9BUE6 129 aa17.13■□□□□ 0.33
UBA3-210ENST00000485424 BCL2L13Q9BXK5 485 aa17.13■□□□□ 0.33
UBA3-210ENST00000485424 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
UBA3-210ENST00000485424 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
UBA3-210ENST00000485424 SHTN1A0MZ66 631 aa17.12■□□□□ 0.33
UBA3-210ENST00000485424 ATP5J2-PTCD1G3V325 749 aa17.12■□□□□ 0.33
UBA3-210ENST00000485424 HIRAP54198 1017 aaPredicted RBP17.12■□□□□ 0.33
UBA3-210ENST00000485424 TNIP1Q15025 636 aa17.12■□□□□ 0.33
UBA3-210ENST00000485424 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
UBA3-210ENST00000485424 GPR101Q96P66 508 aaPredicted RBP17.12■□□□□ 0.33
UBA3-210ENST00000485424 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
UBA3-210ENST00000485424 ELL2O00472 640 aaPredicted RBP17.11■□□□□ 0.33
UBA3-210ENST00000485424 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
UBA3-210ENST00000485424 SAPCD2Q86UD0 394 aa17.11■□□□□ 0.33
UBA3-210ENST00000485424 CELF1Q92879 486 aaKnown RBP17.11■□□□□ 0.33
UBA3-210ENST00000485424 AOC2O75106 756 aa17.1■□□□□ 0.33
UBA3-210ENST00000485424 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
UBA3-210ENST00000485424 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
UBA3-210ENST00000485424 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
UBA3-210ENST00000485424 ZC3H15Q8WU90 426 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms