RNA–Protein interactions for RNA: ENST00000485373.5

RTCB-204, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-204ENST00000485373 ABCC4O15439 1325 aa11.54□□□□□ -0.56
RTCB-204ENST00000485373 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
RTCB-204ENST00000485373 C21orf2O43822 256 aa11.53□□□□□ -0.56
RTCB-204ENST00000485373 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
RTCB-204ENST00000485373 CTSWP56202 376 aa11.53□□□□□ -0.56
RTCB-204ENST00000485373 SF3B3Q15393 1217 aaKnown RBP11.53□□□□□ -0.56
RTCB-204ENST00000485373 TMX4Q9H1E5 349 aaPredicted RBP11.53□□□□□ -0.56
RTCB-204ENST00000485373 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
RTCB-204ENST00000485373 CHMP3Q9Y3E7 222 aa11.53□□□□□ -0.56
RTCB-204ENST00000485373 SPEF2Q9C093 1822 aa11.52□□□□□ -0.57
RTCB-204ENST00000485373 CASP7P55210 303 aa11.52□□□□□ -0.57
RTCB-204ENST00000485373 GRAPQ13588 217 aa11.52□□□□□ -0.57
RTCB-204ENST00000485373 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
RTCB-204ENST00000485373 GRAPLQ8TC17 118 aaPredicted RBP11.52□□□□□ -0.57
RTCB-204ENST00000485373 PLA2G12BQ9BX93 195 aa11.52□□□□□ -0.57
RTCB-204ENST00000485373 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
RTCB-204ENST00000485373 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
RTCB-204ENST00000485373 DZIP1LQ8IYY4 767 aaKnown RBP11.51□□□□□ -0.57
RTCB-204ENST00000485373 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.51□□□□□ -0.57
RTCB-204ENST00000485373 SUCLG2Q96I99 432 aa11.51□□□□□ -0.57
RTCB-204ENST00000485373 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
RTCB-204ENST00000485373 BBOX1O75936 387 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 UBTFL1P0CB47 393 aaPredicted RBP11.5□□□□□ -0.57
RTCB-204ENST00000485373 MS4A1P11836 297 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 RASSF7Q02833 373 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 FAM161AQ3B820 660 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 INTS3Q68E01 1043 aaKnown RBP11.5□□□□□ -0.57
RTCB-204ENST00000485373 ANKRD18AQ8IVF6 992 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 ITPRIPQ8IWB1 547 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 TMEM57Q8N5G2 664 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 CELF1Q92879 486 aaKnown RBP11.5□□□□□ -0.57
RTCB-204ENST00000485373 CDC5LQ99459 802 aaKnown RBP11.5□□□□□ -0.57
RTCB-204ENST00000485373 GREM2Q9H772 168 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 SEC31BQ9NQW1 1179 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 FER1L6Q2WGJ9 1857 aa11.5□□□□□ -0.57
RTCB-204ENST00000485373 PLIN1O60240 522 aa11.49□□□□□ -0.57
RTCB-204ENST00000485373 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
RTCB-204ENST00000485373 LMBR1LQ6UX01 489 aa11.49□□□□□ -0.57
RTCB-204ENST00000485373 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
RTCB-204ENST00000485373 USP44Q9H0E7 712 aa11.49□□□□□ -0.57
RTCB-204ENST00000485373 HDAC5Q9UQL6 1122 aa11.49□□□□□ -0.57
RTCB-204ENST00000485373 UTYO14607 1347 aa11.49□□□□□ -0.57
RTCB-204ENST00000485373 SBF1O95248 1867 aa11.49□□□□□ -0.57
RTCB-204ENST00000485373 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 GNAI3P08754 354 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 ITGA6P23229 1130 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 IGHMBP2P38935 993 aaKnown RBP11.48□□□□□ -0.57
RTCB-204ENST00000485373 RPS8P62241 208 aaKnown RBP11.48□□□□□ -0.57
RTCB-204ENST00000485373 FOXO4P98177 505 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 IFIT5Q13325 482 aaKnown RBP11.48□□□□□ -0.57
RTCB-204ENST00000485373 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 TMC4Q7Z404 712 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 PANK1Q8TE04 598 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 MEIS3Q99687 375 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 BICC1Q9H694 974 aaKnown RBP11.48□□□□□ -0.57
RTCB-204ENST00000485373 ATP6V0A2Q9Y487 856 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 COL4A1P02462 1669 aa11.48□□□□□ -0.57
RTCB-204ENST00000485373 CSF1RP07333 972 aa11.47□□□□□ -0.57
RTCB-204ENST00000485373 RLBP1P12271 317 aa11.47□□□□□ -0.57
RTCB-204ENST00000485373 CCDC57Q2TAC2 916 aa11.47□□□□□ -0.57
RTCB-204ENST00000485373 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
RTCB-204ENST00000485373 SP8Q8IXZ3 490 aa11.47□□□□□ -0.57
RTCB-204ENST00000485373 C7orf43Q8WVR3 580 aa11.47□□□□□ -0.57
RTCB-204ENST00000485373 LRRFIP2Q9Y608 721 aaKnown RBP11.47□□□□□ -0.57
RTCB-204ENST00000485373 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
RTCB-204ENST00000485373 NFKBIEO00221 500 aa11.46□□□□□ -0.57
RTCB-204ENST00000485373 FKBP4Q02790 459 aaKnown RBP eCLIP11.46□□□□□ -0.57
RTCB-204ENST00000485373 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
RTCB-204ENST00000485373 C9orf131Q5VYM1 1079 aa11.46□□□□□ -0.57
RTCB-204ENST00000485373 MPHOSPH8Q99549 860 aa11.46□□□□□ -0.57
RTCB-204ENST00000485373 RNF181Q9P0P0 153 aa11.46□□□□□ -0.57
RTCB-204ENST00000485373 DICER1Q9UPY3 1922 aaKnown RBP11.45□□□□□ -0.58
RTCB-204ENST00000485373 LTBP3Q9NS15 1303 aa11.45□□□□□ -0.58
RTCB-204ENST00000485373 LMNB1P20700 586 aa11.45□□□□□ -0.58
RTCB-204ENST00000485373 YY1P25490 414 aa11.45□□□□□ -0.58
RTCB-204ENST00000485373 DPP8Q6V1X1 898 aaPredicted RBP11.45□□□□□ -0.58
RTCB-204ENST00000485373 MPNDQ8N594 471 aa11.45□□□□□ -0.58
RTCB-204ENST00000485373 ANKRD44Q8N8A2 993 aa11.45□□□□□ -0.58
RTCB-204ENST00000485373 KAZALD1Q96I82 304 aa11.45□□□□□ -0.58
RTCB-204ENST00000485373 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
RTCB-204ENST00000485373 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
RTCB-204ENST00000485373 TIAM2Q8IVF5 1701 aa11.44□□□□□ -0.58
RTCB-204ENST00000485373 GNAI2P04899 355 aa11.44□□□□□ -0.58
RTCB-204ENST00000485373 RRP1P56182 461 aaKnown RBP11.44□□□□□ -0.58
RTCB-204ENST00000485373 RABL6Q3YEC7 729 aaPredicted RBP11.44□□□□□ -0.58
RTCB-204ENST00000485373 SUPT20HQ8NEM7 779 aa11.44□□□□□ -0.58
RTCB-204ENST00000485373 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
RTCB-204ENST00000485373 PSMD1Q99460 953 aa11.44□□□□□ -0.58
RTCB-204ENST00000485373 BSDC1Q9NW68 430 aaPredicted RBP11.44□□□□□ -0.58
RTCB-204ENST00000485373 ANKIB1Q9P2G1 1089 aa11.44□□□□□ -0.58
RTCB-204ENST00000485373 COG6Q9Y2V7 657 aa11.44□□□□□ -0.58
RTCB-204ENST00000485373 C6orf229H3BNL8 230 aa11.43□□□□□ -0.58
RTCB-204ENST00000485373 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
RTCB-204ENST00000485373 GPSM2P81274 684 aa11.43□□□□□ -0.58
RTCB-204ENST00000485373 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms