RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 NIM1KQ8IY84 436 aa20.47■□□□□ 0.87
SIK3-211ENST00000485363 KLRG1Q96E93 195 aa20.47■□□□□ 0.87
SIK3-211ENST00000485363 IL16Q14005 1332 aa20.47■□□□□ 0.87
SIK3-211ENST00000485363 SF3B3Q15393 1217 aaKnown RBP20.46■□□□□ 0.87
SIK3-211ENST00000485363 MPNDQ8N594 471 aa20.46■□□□□ 0.87
SIK3-211ENST00000485363 MYD88Q99836 296 aa20.46■□□□□ 0.87
SIK3-211ENST00000485363 RTFDC1Q9BY42 306 aaPredicted RBP20.46■□□□□ 0.87
SIK3-211ENST00000485363 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
SIK3-211ENST00000485363 IRS4O14654 1257 aaPredicted RBP20.45■□□□□ 0.86
SIK3-211ENST00000485363 EPHX2P34913 555 aa20.45■□□□□ 0.86
SIK3-211ENST00000485363 AOC3Q16853 763 aa20.45■□□□□ 0.86
SIK3-211ENST00000485363 ZBTB38Q8NAP3 1195 aaPredicted RBP20.45■□□□□ 0.86
SIK3-211ENST00000485363 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
SIK3-211ENST00000485363 HSP90B1P14625 803 aaKnown RBP20.44■□□□□ 0.86
SIK3-211ENST00000485363 TWISTNBQ3B726 338 aaPredicted RBP20.44■□□□□ 0.86
SIK3-211ENST00000485363 EAPPQ56P03 285 aaPredicted RBP20.44■□□□□ 0.86
SIK3-211ENST00000485363 PNMA8AQ86V59 439 aaPredicted RBP20.44■□□□□ 0.86
SIK3-211ENST00000485363 CCDC191Q8NCU4 936 aa20.44■□□□□ 0.86
SIK3-211ENST00000485363 METTL22Q9BUU2 404 aaPredicted RBP20.44■□□□□ 0.86
SIK3-211ENST00000485363 LRRC37AA6NMS7 1700 aa20.43■□□□□ 0.86
SIK3-211ENST00000485363 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
SIK3-211ENST00000485363 CWC25Q9NXE8 425 aaPredicted RBP20.42■□□□□ 0.86
SIK3-211ENST00000485363 CLEC11AQ9Y240 323 aa20.42■□□□□ 0.86
SIK3-211ENST00000485363 MAP3K2Q9Y2U5 619 aa20.42■□□□□ 0.86
SIK3-211ENST00000485363 PCCAP05165 728 aaPredicted RBP20.41■□□□□ 0.86
SIK3-211ENST00000485363 KSR2Q6VAB6 950 aa20.41■□□□□ 0.86
SIK3-211ENST00000485363 WDR63Q8IWG1 891 aa20.41■□□□□ 0.86
SIK3-211ENST00000485363 JMYQ8N9B5 988 aa20.41■□□□□ 0.86
SIK3-211ENST00000485363 CELF1Q92879 486 aaKnown RBP20.41■□□□□ 0.86
SIK3-211ENST00000485363 ZNRF3Q9ULT6 936 aa20.41■□□□□ 0.86
SIK3-211ENST00000485363 SALL2Q9Y467 1007 aaPredicted RBP20.41■□□□□ 0.86
SIK3-211ENST00000485363 ADAMTSL1Q8N6G6 1762 aa20.41■□□□□ 0.86
SIK3-211ENST00000485363 PI4KAP2A4QPH2 592 aa20.4■□□□□ 0.86
SIK3-211ENST00000485363 KIAA2012Q0VF49 1180 aa20.4■□□□□ 0.86
SIK3-211ENST00000485363 PI4KAP1Q8N8J0 262 aa20.4■□□□□ 0.86
SIK3-211ENST00000485363 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
SIK3-211ENST00000485363 SCNN1DP51172 638 aa20.39■□□□□ 0.85
SIK3-211ENST00000485363 CREBZFQ9NS37 354 aa20.39■□□□□ 0.85
SIK3-211ENST00000485363 PASKQ96RG2 1323 aa20.38■□□□□ 0.85
SIK3-211ENST00000485363 CACNA1FO60840 1977 aa20.38■□□□□ 0.85
SIK3-211ENST00000485363 PDE8AO60658 829 aa20.38■□□□□ 0.85
SIK3-211ENST00000485363 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
SIK3-211ENST00000485363 RPS8P62241 208 aaKnown RBP20.38■□□□□ 0.85
SIK3-211ENST00000485363 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
SIK3-211ENST00000485363 FAM9BQ8IZU0 186 aa20.38■□□□□ 0.85
SIK3-211ENST00000485363 NSFL1CQ9UNZ2 370 aaKnown RBP20.38■□□□□ 0.85
SIK3-211ENST00000485363 LTBP1Q14766 1721 aa20.38■□□□□ 0.85
SIK3-211ENST00000485363 DUOX1Q9NRD9 1551 aa20.38■□□□□ 0.85
SIK3-211ENST00000485363 EPS15P42566 896 aa20.37■□□□□ 0.85
SIK3-211ENST00000485363 CXCL9Q07325 125 aa20.37■□□□□ 0.85
SIK3-211ENST00000485363 CCDC152Q4G0S7 254 aa20.37■□□□□ 0.85
SIK3-211ENST00000485363 COL4A1P02462 1669 aa20.36■□□□□ 0.85
SIK3-211ENST00000485363 CDHR2Q9BYE9 1310 aa20.36■□□□□ 0.85
SIK3-211ENST00000485363 ITGBL1O95965 494 aaPredicted RBP20.36■□□□□ 0.85
SIK3-211ENST00000485363 WASHC4Q2M389 1173 aa20.36■□□□□ 0.85
SIK3-211ENST00000485363 G2E3Q7L622 706 aa20.36■□□□□ 0.85
SIK3-211ENST00000485363 JARID2Q92833 1246 aaPredicted RBP20.36■□□□□ 0.85
SIK3-211ENST00000485363 IGKV5-2P06315 115 aa20.35■□□□□ 0.85
SIK3-211ENST00000485363 GPSM2P81274 684 aa20.35■□□□□ 0.85
SIK3-211ENST00000485363 TNIP1Q15025 636 aa20.35■□□□□ 0.85
SIK3-211ENST00000485363 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
SIK3-211ENST00000485363 CIAPIN1Q6FI81 312 aa20.35■□□□□ 0.85
SIK3-211ENST00000485363 USP50Q70EL3 339 aaPredicted RBP20.35■□□□□ 0.85
SIK3-211ENST00000485363 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
SIK3-211ENST00000485363 SEC31BQ9NQW1 1179 aa20.35■□□□□ 0.85
SIK3-211ENST00000485363 PCNTO95613 3336 aa20.34■□□□□ 0.85
SIK3-211ENST00000485363 C6orf229H3BNL8 230 aa20.34■□□□□ 0.85
SIK3-211ENST00000485363 FLIIQ13045 1269 aa20.34■□□□□ 0.85
SIK3-211ENST00000485363 GPRC5DQ9NZD1 345 aa20.34■□□□□ 0.85
SIK3-211ENST00000485363 VAMP4O75379 141 aa20.33■□□□□ 0.85
SIK3-211ENST00000485363 RAD17O75943 681 aa20.33■□□□□ 0.85
SIK3-211ENST00000485363 EXOSC9Q06265 439 aaKnown RBP20.33■□□□□ 0.85
SIK3-211ENST00000485363 EYA3Q99504 573 aa20.33■□□□□ 0.85
SIK3-211ENST00000485363 ADARB2Q9NS39 739 aaKnown RBP20.33■□□□□ 0.85
SIK3-211ENST00000485363 POLLQ9UGP5 575 aa20.33■□□□□ 0.85
SIK3-211ENST00000485363 MYH3P11055 1940 aa20.33■□□□□ 0.84
SIK3-211ENST00000485363 TMEM88BA6NKF7 163 aa20.32■□□□□ 0.84
SIK3-211ENST00000485363 NEURL1BA8MQ27 555 aa20.32■□□□□ 0.84
SIK3-211ENST00000485363 GMPSP49915 693 aaPredicted RBP20.32■□□□□ 0.84
SIK3-211ENST00000485363 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
SIK3-211ENST00000485363 CWF19L2Q2TBE0 894 aaKnown RBP20.32■□□□□ 0.84
SIK3-211ENST00000485363 CCDC85AQ96PX6 553 aaPredicted RBP20.32■□□□□ 0.84
SIK3-211ENST00000485363 BCL2L13Q9BXK5 485 aa20.32■□□□□ 0.84
SIK3-211ENST00000485363 MYH16Q9H6N6 1097 aa20.32■□□□□ 0.84
SIK3-211ENST00000485363 YDJCA8MPS7 323 aa20.31■□□□□ 0.84
SIK3-211ENST00000485363 RIMBP2O15034 1052 aa20.31■□□□□ 0.84
SIK3-211ENST00000485363 CTSWP56202 376 aa20.31■□□□□ 0.84
SIK3-211ENST00000485363 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
SIK3-211ENST00000485363 TBC1D16Q8TBP0 767 aa20.31■□□□□ 0.84
SIK3-211ENST00000485363 PODXL2Q9NZ53 605 aa20.31■□□□□ 0.84
SIK3-211ENST00000485363 MKRN1Q9UHC7 482 aaKnown RBP20.31■□□□□ 0.84
SIK3-211ENST00000485363 DBNDD1Q9H9R9 158 aa20.3■□□□□ 0.84
SIK3-211ENST00000485363 ANKIB1Q9P2G1 1089 aa20.3■□□□□ 0.84
SIK3-211ENST00000485363 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
SIK3-211ENST00000485363 CDC5LQ99459 802 aaKnown RBP20.29■□□□□ 0.84
SIK3-211ENST00000485363 ZC3H12CQ9C0D7 883 aaKnown RBP20.29■□□□□ 0.84
SIK3-211ENST00000485363 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
SIK3-211ENST00000485363 H7C1W4 665 aa20.28■□□□□ 0.84
SIK3-211ENST00000485363 UFL1O94874 794 aa20.28■□□□□ 0.84
SIK3-211ENST00000485363 UBE3BQ7Z3V4 1068 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms