RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CWC25Q9NXE8 425 aaPredicted RBP9.96□□□□□ -0.82
MACF1-220ENST00000485063 ABCC12Q96J65 1359 aa9.96□□□□□ -0.82
MACF1-220ENST00000485063 TNRC6CQ9HCJ0 1690 aaKnown RBP9.96□□□□□ -0.82
MACF1-220ENST00000485063 C21orf2O43822 256 aa9.95□□□□□ -0.82
MACF1-220ENST00000485063 C7P10643 843 aa9.95□□□□□ -0.82
MACF1-220ENST00000485063 PRPF40BQ6NWY9 871 aaKnown RBP9.95□□□□□ -0.82
MACF1-220ENST00000485063 ZBTB38Q8NAP3 1195 aaPredicted RBP9.95□□□□□ -0.82
MACF1-220ENST00000485063 DNAAF4Q8WXU2 420 aa9.95□□□□□ -0.82
MACF1-220ENST00000485063 LAMB2P55268 1798 aa9.95□□□□□ -0.82
MACF1-220ENST00000485063 SLX4Q8IY92 1834 aa9.95□□□□□ -0.82
MACF1-220ENST00000485063 CCDC88AQ3V6T2 1871 aa9.94□□□□□ -0.82
MACF1-220ENST00000485063 DDX60Q8IY21 1712 aaKnown RBP9.94□□□□□ -0.82
MACF1-220ENST00000485063 ADCY9O60503 1353 aa9.94□□□□□ -0.82
MACF1-220ENST00000485063 HCLS1P14317 486 aaPredicted RBP9.94□□□□□ -0.82
MACF1-220ENST00000485063 ALDH1L2Q3SY69 923 aa9.94□□□□□ -0.82
MACF1-220ENST00000485063 CRY2Q49AN0 593 aa9.94□□□□□ -0.82
MACF1-220ENST00000485063 RTL5Q5HYW3 569 aaPredicted RBP9.94□□□□□ -0.82
MACF1-220ENST00000485063 DDX46Q7L014 1031 aaKnown RBP9.94□□□□□ -0.82
MACF1-220ENST00000485063 TRMT2AQ8IZ69 625 aaKnown RBP9.94□□□□□ -0.82
MACF1-220ENST00000485063 SLC39A7Q92504 469 aa9.94□□□□□ -0.82
MACF1-220ENST00000485063 FAM89AQ96GI7 184 aa9.94□□□□□ -0.82
MACF1-220ENST00000485063 IRS4O14654 1257 aaPredicted RBP9.93□□□□□ -0.82
MACF1-220ENST00000485063 ATMINO43313 823 aaPredicted RBP9.93□□□□□ -0.82
MACF1-220ENST00000485063 PCCAP05165 728 aaPredicted RBP9.93□□□□□ -0.82
MACF1-220ENST00000485063 HOXA10P31260 410 aaPredicted RBP9.93□□□□□ -0.82
MACF1-220ENST00000485063 CCDC93Q567U6 631 aa9.93□□□□□ -0.82
MACF1-220ENST00000485063 LINS1Q8NG48 757 aa9.93□□□□□ -0.82
MACF1-220ENST00000485063 CRAMP1Q96RY5 1269 aa9.93□□□□□ -0.82
MACF1-220ENST00000485063 MYH3P11055 1940 aa9.93□□□□□ -0.82
MACF1-220ENST00000485063 SBF1O95248 1867 aa9.93□□□□□ -0.82
MACF1-220ENST00000485063 FER1L6Q2WGJ9 1857 aa9.93□□□□□ -0.82
MACF1-220ENST00000485063 PTPRCP08575 1304 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 NEURL1BA8MQ27 555 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 PDE8AO60658 829 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 CWF19L2Q2TBE0 894 aaKnown RBP9.92□□□□□ -0.82
MACF1-220ENST00000485063 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 CC2D2BQ6DHV5 1058 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 SLC4A10Q6U841 1118 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 RTKN2Q8IZC4 609 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 SYNE4Q8N205 404 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 MRPL50Q8N5N7 158 aaKnown RBP9.92□□□□□ -0.82
MACF1-220ENST00000485063 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
MACF1-220ENST00000485063 SMC4Q9NTJ3 1288 aa9.92□□□□□ -0.82
MACF1-220ENST00000485063 CDHR2Q9BYE9 1310 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
MACF1-220ENST00000485063 BBOX1O75936 387 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 IGKV5-2P06315 115 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 LMNB1P20700 586 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 CCDC152Q4G0S7 254 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 MAMSTRQ6ZN01 415 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 TMC4Q7Z404 712 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 SSH1Q8WYL5 1049 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 BCL2L13Q9BXK5 485 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 TAOK3Q9H2K8 898 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 RNF181Q9P0P0 153 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 METRNQ9UJH8 293 aa9.91□□□□□ -0.82
MACF1-220ENST00000485063 DICER1Q9UPY3 1922 aaKnown RBP9.9□□□□□ -0.82
MACF1-220ENST00000485063 LTBP3Q9NS15 1303 aa9.9□□□□□ -0.82
MACF1-220ENST00000485063 F6X3S4 739 aa9.9□□□□□ -0.82
MACF1-220ENST00000485063 RASSF7Q02833 373 aa9.9□□□□□ -0.82
MACF1-220ENST00000485063 GRAPQ13588 217 aa9.9□□□□□ -0.82
MACF1-220ENST00000485063 GCKRQ14397 625 aa9.9□□□□□ -0.82
MACF1-220ENST00000485063 SF3B3Q15393 1217 aaKnown RBP9.9□□□□□ -0.82
MACF1-220ENST00000485063 C9orf131Q5VYM1 1079 aa9.9□□□□□ -0.82
MACF1-220ENST00000485063 GRAPLQ8TC17 118 aaPredicted RBP9.9□□□□□ -0.82
MACF1-220ENST00000485063 SRCIN1Q9C0H9 1055 aa9.9□□□□□ -0.82
MACF1-220ENST00000485063 C9orf78Q9NZ63 289 aaPredicted RBP9.9□□□□□ -0.82
MACF1-220ENST00000485063 ABCC4O15439 1325 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 KIF16BQ96L93 1317 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 H7C1W4 665 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
MACF1-220ENST00000485063 BEND3Q5T5X7 828 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 C3orf67Q6ZVT6 689 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 UBE3BQ7Z3V4 1068 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 C7orf43Q8WVR3 580 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 JARID2Q92833 1246 aaPredicted RBP9.89□□□□□ -0.83
MACF1-220ENST00000485063 KIF12Q96FN5 646 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 TAF1P21675 1872 aa9.89□□□□□ -0.83
MACF1-220ENST00000485063 ZC3H4Q9UPT8 1303 aaKnown RBP9.88□□□□□ -0.83
MACF1-220ENST00000485063 TIAM2Q8IVF5 1701 aa9.88□□□□□ -0.83
MACF1-220ENST00000485063 NFKBIEO00221 500 aa9.88□□□□□ -0.83
MACF1-220ENST00000485063 IPO8O15397 1037 aaKnown RBP9.88□□□□□ -0.83
MACF1-220ENST00000485063 CTSWP56202 376 aa9.88□□□□□ -0.83
MACF1-220ENST00000485063 SP8Q8IXZ3 490 aa9.88□□□□□ -0.83
MACF1-220ENST00000485063 ZNF784Q8NCA9 323 aaPredicted RBP9.88□□□□□ -0.83
MACF1-220ENST00000485063 SUPT20HQ8NEM7 779 aa9.88□□□□□ -0.83
MACF1-220ENST00000485063 CDC5LQ99459 802 aaKnown RBP9.88□□□□□ -0.83
MACF1-220ENST00000485063 API5Q9BZZ5 524 aaKnown RBP9.88□□□□□ -0.83
MACF1-220ENST00000485063 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
MACF1-220ENST00000485063 ATP6V0A2Q9Y487 856 aa9.88□□□□□ -0.83
MACF1-220ENST00000485063 KDM2BQ8NHM5 1336 aa9.87□□□□□ -0.83
MACF1-220ENST00000485063 GRM8O00222 908 aa9.87□□□□□ -0.83
MACF1-220ENST00000485063 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
MACF1-220ENST00000485063 BRPF1P55201 1214 aaPredicted RBP9.87□□□□□ -0.83
MACF1-220ENST00000485063 RPS8P62241 208 aaKnown RBP9.87□□□□□ -0.83
MACF1-220ENST00000485063 DPY19L2Q6NUT2 758 aa9.87□□□□□ -0.83
MACF1-220ENST00000485063 ANKRD18AQ8IVF6 992 aa9.87□□□□□ -0.83
MACF1-220ENST00000485063 MPNDQ8N594 471 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms